RNA–Protein interactions for RNA: ENST00000551681.1

RRN3P1-203, Transcript of RRN3 homolog, RNA polymerase I transcription factor pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene RRN3P1, Length 1,151 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P1-203ENST00000551681 RCAN3Q9UKA8 241 aa12.24□□□□□ -0.45
RRN3P1-203ENST00000551681 H7C1W4 665 aa12.23□□□□□ -0.45
RRN3P1-203ENST00000551681 BBOX1O75936 387 aa12.23□□□□□ -0.45
RRN3P1-203ENST00000551681 CCDC93Q567U6 631 aa12.23□□□□□ -0.45
RRN3P1-203ENST00000551681 CDC5LQ99459 802 aaKnown RBP12.23□□□□□ -0.45
RRN3P1-203ENST00000551681 PLA2G12BQ9BX93 195 aa12.23□□□□□ -0.45
RRN3P1-203ENST00000551681 CHMP4BQ9H444 224 aaKnown RBP12.23□□□□□ -0.45
RRN3P1-203ENST00000551681 RTL9Q8NET4 1388 aa12.22□□□□□ -0.45
RRN3P1-203ENST00000551681 ABCC4O15439 1325 aa12.22□□□□□ -0.45
RRN3P1-203ENST00000551681 CTSWP56202 376 aa12.22□□□□□ -0.45
RRN3P1-203ENST00000551681 GRAPQ13588 217 aa12.22□□□□□ -0.45
RRN3P1-203ENST00000551681 RTL5Q5HYW3 569 aaPredicted RBP12.22□□□□□ -0.45
RRN3P1-203ENST00000551681 RTKN2Q8IZC4 609 aa12.22□□□□□ -0.45
RRN3P1-203ENST00000551681 GRAPLQ8TC17 118 aaPredicted RBP12.22□□□□□ -0.45
RRN3P1-203ENST00000551681 PPEF1O14829 653 aaPredicted RBP12.21□□□□□ -0.45
RRN3P1-203ENST00000551681 BCAR3O75815 825 aa12.21□□□□□ -0.45
RRN3P1-203ENST00000551681 GNAI3P08754 354 aa12.21□□□□□ -0.45
RRN3P1-203ENST00000551681 YBX3P16989 372 aaKnown RBP eCLIP12.21□□□□□ -0.45
RRN3P1-203ENST00000551681 INTS3Q68E01 1043 aaKnown RBP12.21□□□□□ -0.45
RRN3P1-203ENST00000551681 UTYO14607 1347 aa12.2□□□□□ -0.46
RRN3P1-203ENST00000551681 UBTFL1P0CB47 393 aaPredicted RBP12.2□□□□□ -0.46
RRN3P1-203ENST00000551681 TRIM27P14373 513 aa12.2□□□□□ -0.46
RRN3P1-203ENST00000551681 ARHGAP27Q6ZUM4 889 aa12.2□□□□□ -0.46
RRN3P1-203ENST00000551681 DZIP1LQ8IYY4 767 aaKnown RBP12.2□□□□□ -0.46
RRN3P1-203ENST00000551681 LTBP3Q9NS15 1303 aa12.19□□□□□ -0.46
RRN3P1-203ENST00000551681 ZC3H4Q9UPT8 1303 aaKnown RBP12.19□□□□□ -0.46
RRN3P1-203ENST00000551681 SLX4Q8IY92 1834 aa12.19□□□□□ -0.46
RRN3P1-203ENST00000551681 IGHMBP2P38935 993 aaKnown RBP12.19□□□□□ -0.46
RRN3P1-203ENST00000551681 ANKRD18AQ8IVF6 992 aa12.19□□□□□ -0.46
RRN3P1-203ENST00000551681 SUPT20HQ8NEM7 779 aa12.19□□□□□ -0.46
RRN3P1-203ENST00000551681 TAOK3Q9H2K8 898 aa12.19□□□□□ -0.46
RRN3P1-203ENST00000551681 WWC3Q9ULE0 1092 aa12.19□□□□□ -0.46
RRN3P1-203ENST00000551681 ATP6V0A2Q9Y487 856 aa12.19□□□□□ -0.46
RRN3P1-203ENST00000551681 ANKRD18BA2A2Z9 1011 aa12.18□□□□□ -0.46
RRN3P1-203ENST00000551681 C21orf2O43822 256 aa12.18□□□□□ -0.46
RRN3P1-203ENST00000551681 CASP7P55210 303 aa12.18□□□□□ -0.46
RRN3P1-203ENST00000551681 RPS8P62241 208 aaKnown RBP12.18□□□□□ -0.46
RRN3P1-203ENST00000551681 IFIT5Q13325 482 aaKnown RBP12.18□□□□□ -0.46
RRN3P1-203ENST00000551681 CCDC57Q2TAC2 916 aa12.18□□□□□ -0.46
RRN3P1-203ENST00000551681 TAF7LQ5H9L4 462 aa12.18□□□□□ -0.46
RRN3P1-203ENST00000551681 SP8Q8IXZ3 490 aa12.18□□□□□ -0.46
RRN3P1-203ENST00000551681 SYNE4Q8N205 404 aa12.18□□□□□ -0.46
RRN3P1-203ENST00000551681 TTLL11Q8NHH1 800 aa12.18□□□□□ -0.46
RRN3P1-203ENST00000551681 FER1L6Q2WGJ9 1857 aa12.18□□□□□ -0.46
RRN3P1-203ENST00000551681 CEP350Q5VT06 3117 aa12.18□□□□□ -0.46
RRN3P1-203ENST00000551681 CSF1RP07333 972 aa12.17□□□□□ -0.46
RRN3P1-203ENST00000551681 MPHOSPH8Q99549 860 aa12.17□□□□□ -0.46
RRN3P1-203ENST00000551681 VPS33BQ9H267 617 aa12.17□□□□□ -0.46
RRN3P1-203ENST00000551681 CHMP3Q9Y3E7 222 aa12.17□□□□□ -0.46
RRN3P1-203ENST00000551681 LRRC37AA6NMS7 1700 aa12.17□□□□□ -0.46
RRN3P1-203ENST00000551681 NBPF7P0C2Y1 421 aaPredicted RBP12.16□□□□□ -0.46
RRN3P1-203ENST00000551681 LMNB1P20700 586 aa12.16□□□□□ -0.46
RRN3P1-203ENST00000551681 FKBP4Q02790 459 aaKnown RBP eCLIP12.16□□□□□ -0.46
RRN3P1-203ENST00000551681 PDE3AQ14432 1141 aa12.16□□□□□ -0.46
RRN3P1-203ENST00000551681 C3orf67Q6ZVT6 689 aa12.16□□□□□ -0.46
RRN3P1-203ENST00000551681 ITPRIPQ8IWB1 547 aa12.16□□□□□ -0.46
RRN3P1-203ENST00000551681 C7orf43Q8WVR3 580 aa12.16□□□□□ -0.46
RRN3P1-203ENST00000551681 CLUAP1Q96AJ1 413 aa12.16□□□□□ -0.46
RRN3P1-203ENST00000551681 PSMD1Q99460 953 aa12.16□□□□□ -0.46
RRN3P1-203ENST00000551681 USP44Q9H0E7 712 aa12.16□□□□□ -0.46
RRN3P1-203ENST00000551681 ITGA6P23229 1130 aa12.15□□□□□ -0.46
RRN3P1-203ENST00000551681 LMBR1LQ6UX01 489 aa12.15□□□□□ -0.46
RRN3P1-203ENST00000551681 DPP8Q6V1X1 898 aaPredicted RBP12.15□□□□□ -0.46
RRN3P1-203ENST00000551681 MPNDQ8N594 471 aa12.15□□□□□ -0.46
RRN3P1-203ENST00000551681 JARID2Q92833 1246 aaPredicted RBP12.15□□□□□ -0.46
RRN3P1-203ENST00000551681 GREM2Q9H772 168 aa12.15□□□□□ -0.46
RRN3P1-203ENST00000551681 BSDC1Q9NW68 430 aaPredicted RBP12.15□□□□□ -0.46
RRN3P1-203ENST00000551681 ZNF219Q9P2Y4 722 aaPredicted RBP12.15□□□□□ -0.46
RRN3P1-203ENST00000551681 DDX19BQ9UMR2 479 aa12.15□□□□□ -0.46
RRN3P1-203ENST00000551681 GNAI2P04899 355 aa12.14□□□□□ -0.47
RRN3P1-203ENST00000551681 FOXO4P98177 505 aa12.14□□□□□ -0.47
RRN3P1-203ENST00000551681 FAM161AQ3B820 660 aa12.14□□□□□ -0.47
RRN3P1-203ENST00000551681 RABL6Q3YEC7 729 aaPredicted RBP12.14□□□□□ -0.47
RRN3P1-203ENST00000551681 CELF1Q92879 486 aaKnown RBP12.14□□□□□ -0.47
RRN3P1-203ENST00000551681 EYA3Q99504 573 aa12.14□□□□□ -0.47
RRN3P1-203ENST00000551681 ANKRD2Q9GZV1 360 aa12.14□□□□□ -0.47
RRN3P1-203ENST00000551681 XDHP47989 1333 aa12.13□□□□□ -0.47
RRN3P1-203ENST00000551681 DICER1Q9UPY3 1922 aaKnown RBP12.13□□□□□ -0.47
RRN3P1-203ENST00000551681 NFKBIEO00221 500 aa12.13□□□□□ -0.47
RRN3P1-203ENST00000551681 TMEM57Q8N5G2 664 aa12.13□□□□□ -0.47
RRN3P1-203ENST00000551681 JDP2Q8WYK2 163 aa12.13□□□□□ -0.47
RRN3P1-203ENST00000551681 SUCLG2Q96I99 432 aa12.13□□□□□ -0.47
RRN3P1-203ENST00000551681 CCDC85AQ96PX6 553 aaPredicted RBP12.13□□□□□ -0.47
RRN3P1-203ENST00000551681 BICC1Q9H694 974 aaKnown RBP12.13□□□□□ -0.47
RRN3P1-203ENST00000551681 RNF181Q9P0P0 153 aa12.13□□□□□ -0.47
RRN3P1-203ENST00000551681 ANKIB1Q9P2G1 1089 aa12.13□□□□□ -0.47
RRN3P1-203ENST00000551681 FBXO3Q9UK99 471 aa12.13□□□□□ -0.47
RRN3P1-203ENST00000551681 NSFL1CQ9UNZ2 370 aaKnown RBP12.13□□□□□ -0.47
RRN3P1-203ENST00000551681 SBF1O95248 1867 aa12.12□□□□□ -0.47
RRN3P1-203ENST00000551681 MEIS3Q99687 375 aa12.12□□□□□ -0.47
RRN3P1-203ENST00000551681 SEC31BQ9NQW1 1179 aa12.12□□□□□ -0.47
RRN3P1-203ENST00000551681 CNNM1Q9NRU3 951 aa12.12□□□□□ -0.47
RRN3P1-203ENST00000551681 PODXL2Q9NZ53 605 aa12.12□□□□□ -0.47
RRN3P1-203ENST00000551681 TAF1P21675 1872 aa12.12□□□□□ -0.47
RRN3P1-203ENST00000551681 CCDC88AQ3V6T2 1871 aa12.12□□□□□ -0.47
RRN3P1-203ENST00000551681 SPEF2Q9C093 1822 aa12.11□□□□□ -0.47
RRN3P1-203ENST00000551681 ATP2B4P23634 1241 aa12.11□□□□□ -0.47
RRN3P1-203ENST00000551681 IARSP41252 1262 aaKnown RBP12.11□□□□□ -0.47
RRN3P1-203ENST00000551681 KCNJ4P48050 445 aa12.11□□□□□ -0.47
RRN3P1-203ENST00000551681 MVPQ14764 893 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms