RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-223ENST00000551260 COL15A1P39059 1388 aa8.37□□□□□ -1.07
RACGAP1-223ENST00000551260 PBX2P40425 430 aa8.37□□□□□ -1.07
RACGAP1-223ENST00000551260 CTU1Q7Z7A3 348 aaKnown RBP8.37□□□□□ -1.07
RACGAP1-223ENST00000551260 DNAJC10Q8IXB1 793 aa8.37□□□□□ -1.07
RACGAP1-223ENST00000551260 SYNE4Q8N205 404 aa8.37□□□□□ -1.07
RACGAP1-223ENST00000551260 ZNF408Q9H9D4 720 aa8.37□□□□□ -1.07
RACGAP1-223ENST00000551260 GJA3Q9Y6H8 435 aa8.37□□□□□ -1.07
RACGAP1-223ENST00000551260 ROCK2O75116 1388 aaKnown RBP8.36□□□□□ -1.07
RACGAP1-223ENST00000551260 TONSLQ96HA7 1378 aa8.36□□□□□ -1.07
RACGAP1-223ENST00000551260 ERVV-2B6SEH9 535 aa8.36□□□□□ -1.07
RACGAP1-223ENST00000551260 FZD9O00144 591 aa8.36□□□□□ -1.07
RACGAP1-223ENST00000551260 TRPA1O75762 1119 aa8.36□□□□□ -1.07
RACGAP1-223ENST00000551260 PDE6BP35913 854 aa8.36□□□□□ -1.07
RACGAP1-223ENST00000551260 GPC2Q8N158 579 aa8.36□□□□□ -1.07
RACGAP1-223ENST00000551260 PCDHGA10Q9Y5H3 936 aa8.36□□□□□ -1.07
RACGAP1-223ENST00000551260 EMILIN1Q9Y6C2 1016 aa8.36□□□□□ -1.07
RACGAP1-223ENST00000551260 SPDYE16A6NNV3 312 aaPredicted RBP8.35□□□□□ -1.07
RACGAP1-223ENST00000551260 SCNN1DP51172 638 aa8.35□□□□□ -1.07
RACGAP1-223ENST00000551260 CABP4P57796 275 aa8.35□□□□□ -1.07
RACGAP1-223ENST00000551260 FKBP4Q02790 459 aaKnown RBP eCLIP8.35□□□□□ -1.07
RACGAP1-223ENST00000551260 TBC1D9BQ66K14 1250 aa8.35□□□□□ -1.07
RACGAP1-223ENST00000551260 PRR5LQ6MZQ0 368 aa8.35□□□□□ -1.07
RACGAP1-223ENST00000551260 SPNS2Q8IVW8 549 aa8.35□□□□□ -1.07
RACGAP1-223ENST00000551260 C7orf43Q8WVR3 580 aa8.35□□□□□ -1.07
RACGAP1-223ENST00000551260 HHIPL1Q96JK4 782 aa8.35□□□□□ -1.07
RACGAP1-223ENST00000551260 EYA1Q99502 592 aa8.35□□□□□ -1.07
RACGAP1-223ENST00000551260 BRIP1Q9BX63 1249 aa8.35□□□□□ -1.07
RACGAP1-223ENST00000551260 GLIS2Q9BZE0 524 aaPredicted RBP8.35□□□□□ -1.07
RACGAP1-223ENST00000551260 RNF186Q9NXI6 227 aa8.35□□□□□ -1.07
RACGAP1-223ENST00000551260 ZBTB1Q9Y2K1 713 aa8.35□□□□□ -1.07
RACGAP1-223ENST00000551260 UBR2Q8IWV8 1755 aa8.35□□□□□ -1.07
RACGAP1-223ENST00000551260 CENPFP49454 3210 aa8.35□□□□□ -1.07
RACGAP1-223ENST00000551260 ARHGAP33O14559 1287 aa8.34□□□□□ -1.07
RACGAP1-223ENST00000551260 FYB1O15117 783 aa8.34□□□□□ -1.07
RACGAP1-223ENST00000551260 SRGNP10124 158 aa8.34□□□□□ -1.07
RACGAP1-223ENST00000551260 PSEN2P49810 448 aa8.34□□□□□ -1.07
RACGAP1-223ENST00000551260 LSM11P83369 360 aaKnown RBP eCLIP8.34□□□□□ -1.07
RACGAP1-223ENST00000551260 NOGQ13253 232 aa8.34□□□□□ -1.07
RACGAP1-223ENST00000551260 CCDC93Q567U6 631 aa8.34□□□□□ -1.07
RACGAP1-223ENST00000551260 STYK1Q6J9G0 422 aa8.34□□□□□ -1.07
RACGAP1-223ENST00000551260 DLK2Q6UY11 383 aa8.34□□□□□ -1.07
RACGAP1-223ENST00000551260 CNKSR1Q969H4 720 aa8.34□□□□□ -1.07
RACGAP1-223ENST00000551260 ZDHHC16Q969W1 377 aa8.34□□□□□ -1.07
RACGAP1-223ENST00000551260 ADAM33Q9BZ11 813 aa8.34□□□□□ -1.07
RACGAP1-223ENST00000551260 HTTP42858 3142 aa8.33□□□□□ -1.08
RACGAP1-223ENST00000551260 FAM155AB1AL88 458 aaPredicted RBP8.33□□□□□ -1.08
RACGAP1-223ENST00000551260 PPM1GO15355 546 aaPredicted RBP8.33□□□□□ -1.08
RACGAP1-223ENST00000551260 CYP19A1P11511 503 aaPredicted RBP8.33□□□□□ -1.08
RACGAP1-223ENST00000551260 LMOD1P29536 600 aaPredicted RBP8.33□□□□□ -1.08
RACGAP1-223ENST00000551260 IARSP41252 1262 aaKnown RBP8.33□□□□□ -1.08
RACGAP1-223ENST00000551260 KIF23Q02241 960 aaPredicted RBP8.33□□□□□ -1.08
RACGAP1-223ENST00000551260 NFATC2IPQ8NCF5 419 aa8.33□□□□□ -1.08
RACGAP1-223ENST00000551260 PLSCR2Q9NRY7 297 aa8.33□□□□□ -1.08
RACGAP1-223ENST00000551260 SAGE1Q9NXZ1 904 aa8.33□□□□□ -1.08
RACGAP1-223ENST00000551260 SOGA3Q5TF21 947 aa8.32□□□□□ -1.08
RACGAP1-223ENST00000551260 DMRTA1Q5VZB9 504 aa8.32□□□□□ -1.08
RACGAP1-223ENST00000551260 USP50Q70EL3 339 aaPredicted RBP8.32□□□□□ -1.08
RACGAP1-223ENST00000551260 DDX12PQ92771 950 aa8.32□□□□□ -1.08
RACGAP1-223ENST00000551260 L3MBTL2Q969R5 705 aa8.32□□□□□ -1.08
RACGAP1-223ENST00000551260 MASTLQ96GX5 879 aa8.32□□□□□ -1.08
RACGAP1-223ENST00000551260 PDZRN3Q9UPQ7 1066 aa8.32□□□□□ -1.08
RACGAP1-223ENST00000551260 LAMB4A4D0S4 1761 aa8.31□□□□□ -1.08
RACGAP1-223ENST00000551260 CANXP27824 592 aaKnown RBP8.31□□□□□ -1.08
RACGAP1-223ENST00000551260 HUNKP57058 714 aa8.31□□□□□ -1.08
RACGAP1-223ENST00000551260 AKAP4Q5JQC9 854 aa8.31□□□□□ -1.08
RACGAP1-223ENST00000551260 TYW1BQ6NUM6 668 aa8.31□□□□□ -1.08
RACGAP1-223ENST00000551260 KCNK17Q96T54 332 aa8.31□□□□□ -1.08
RACGAP1-223ENST00000551260 KIF24Q5T7B8 1368 aa8.31□□□□□ -1.08
RACGAP1-223ENST00000551260 PITPNM2Q9BZ72 1349 aa8.3□□□□□ -1.08
RACGAP1-223ENST00000551260 ZNF530Q6P9A1 599 aaPredicted RBP8.3□□□□□ -1.08
RACGAP1-223ENST00000551260 ANKRD13DQ6ZTN6 518 aa8.3□□□□□ -1.08
RACGAP1-223ENST00000551260 SLC51AQ86UW1 340 aa8.3□□□□□ -1.08
RACGAP1-223ENST00000551260 SNED1Q8TER0 1413 aa8.29□□□□□ -1.08
RACGAP1-223ENST00000551260 EIF6P56537 245 aaKnown RBP8.29□□□□□ -1.08
RACGAP1-223ENST00000551260 SLC39A6Q13433 755 aa8.29□□□□□ -1.08
RACGAP1-223ENST00000551260 RGMBQ6NW40 437 aa8.29□□□□□ -1.08
RACGAP1-223ENST00000551260 VSIG10Q8N0Z9 540 aa8.29□□□□□ -1.08
RACGAP1-223ENST00000551260 CNBD1Q8NA66 436 aa8.29□□□□□ -1.08
RACGAP1-223ENST00000551260 FBXW7Q969H0 707 aa8.29□□□□□ -1.08
RACGAP1-223ENST00000551260 CSRNP1Q96S65 589 aa8.29□□□□□ -1.08
RACGAP1-223ENST00000551260 EPAS1Q99814 870 aa8.29□□□□□ -1.08
RACGAP1-223ENST00000551260 BRCA2P51587 3418 aa8.28□□□□□ -1.08
RACGAP1-223ENST00000551260 ST20-MTHFSA0A0A6YYL1 179 aa8.28□□□□□ -1.08
RACGAP1-223ENST00000551260 NPHP1O15259 732 aa8.28□□□□□ -1.08
RACGAP1-223ENST00000551260 HSP90AB1P08238 724 aaKnown RBP8.28□□□□□ -1.08
RACGAP1-223ENST00000551260 MTHFSP49914 203 aa8.28□□□□□ -1.08
RACGAP1-223ENST00000551260 MMRN1Q13201 1228 aa8.28□□□□□ -1.08
RACGAP1-223ENST00000551260 PKN2Q16513 984 aaKnown RBP8.28□□□□□ -1.08
RACGAP1-223ENST00000551260 ZNF296Q8WUU4 475 aaPredicted RBP8.28□□□□□ -1.08
RACGAP1-223ENST00000551260 JDP2Q8WYK2 163 aa8.28□□□□□ -1.08
RACGAP1-223ENST00000551260 ADARB2Q9NS39 739 aaKnown RBP8.28□□□□□ -1.08
RACGAP1-223ENST00000551260 HDAC9Q9UKV0 1011 aa8.28□□□□□ -1.08
RACGAP1-223ENST00000551260 TBC1D2BQ9UPU7 963 aa8.28□□□□□ -1.08
RACGAP1-223ENST00000551260 UNC80Q8N2C7 3258 aa8.28□□□□□ -1.08
RACGAP1-223ENST00000551260 TAF1P21675 1872 aa8.28□□□□□ -1.08
RACGAP1-223ENST00000551260 SHTN1A0MZ66 631 aa8.27□□□□□ -1.09
RACGAP1-223ENST00000551260 TBC1D8O95759 1140 aa8.27□□□□□ -1.09
RACGAP1-223ENST00000551260 PTPREP23469 700 aa8.27□□□□□ -1.09
RACGAP1-223ENST00000551260 ZNF157P51786 506 aaPredicted RBP8.27□□□□□ -1.09
RACGAP1-223ENST00000551260 HIRAP54198 1017 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms