RNA–Protein interactions for RNA: ENST00000551088.1

TMTC3-204, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 3

Gene TMTC3, Length 646 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-204ENST00000551088 KCNH2Q12809 1159 aa12.88□□□□□ -0.35
TMTC3-204ENST00000551088 PAPPAQ13219 1627 aa12.88□□□□□ -0.35
TMTC3-204ENST00000551088 ST20-MTHFSA0A0A6YYL1 179 aa12.87□□□□□ -0.35
TMTC3-204ENST00000551088 SIAH2O43255 324 aa12.87□□□□□ -0.35
TMTC3-204ENST00000551088 LINC01559Q495D7 138 aa12.87□□□□□ -0.35
TMTC3-204ENST00000551088 TREML4Q6UXN2 200 aa12.87□□□□□ -0.35
TMTC3-204ENST00000551088 DDX54Q8TDD1 881 aaKnown RBP12.87□□□□□ -0.35
TMTC3-204ENST00000551088 IP6K1Q92551 441 aa12.87□□□□□ -0.35
TMTC3-204ENST00000551088 COG3Q96JB2 828 aa12.87□□□□□ -0.35
TMTC3-204ENST00000551088 PUS7Q96PZ0 661 aaKnown RBP12.87□□□□□ -0.35
TMTC3-204ENST00000551088 WASF2Q9Y6W5 498 aa12.87□□□□□ -0.35
TMTC3-204ENST00000551088 UTRNP46939 3433 aa12.87□□□□□ -0.35
TMTC3-204ENST00000551088 LY75O60449 1722 aa12.87□□□□□ -0.35
TMTC3-204ENST00000551088 SENP2Q9HC62 589 aa12.86□□□□□ -0.35
TMTC3-204ENST00000551088 PCDHB15Q9Y5E8 787 aa12.86□□□□□ -0.35
TMTC3-204ENST00000551088 SPTLC1O15269 473 aa12.85□□□□□ -0.35
TMTC3-204ENST00000551088 AMPHP49418 695 aa12.85□□□□□ -0.35
TMTC3-204ENST00000551088 BAP1Q92560 729 aa12.85□□□□□ -0.35
TMTC3-204ENST00000551088 MTFR1LQ9H019 292 aa12.85□□□□□ -0.35
TMTC3-204ENST00000551088 ZBTB3Q9H5J0 574 aa12.85□□□□□ -0.35
TMTC3-204ENST00000551088 MAP2P11137 1827 aaKnown RBP12.85□□□□□ -0.35
TMTC3-204ENST00000551088 SYTL4Q96C24 671 aaPredicted RBP12.84□□□□□ -0.35
TMTC3-204ENST00000551088 ITGB4P16144 1822 aa12.83□□□□□ -0.35
TMTC3-204ENST00000551088 CFAP99D6REC4 459 aa12.83□□□□□ -0.36
TMTC3-204ENST00000551088 FBLN1P23142 703 aa12.83□□□□□ -0.36
TMTC3-204ENST00000551088 HOXC9P31274 260 aa12.83□□□□□ -0.36
TMTC3-204ENST00000551088 CTHP32929 405 aa12.83□□□□□ -0.36
TMTC3-204ENST00000551088 RIC3Q7Z5B4 369 aa12.83□□□□□ -0.36
TMTC3-204ENST00000551088 ZNF511Q8NB15 262 aa12.83□□□□□ -0.36
TMTC3-204ENST00000551088 TRIM47Q96LD4 638 aa12.83□□□□□ -0.36
TMTC3-204ENST00000551088 TESK2Q96S53 571 aa12.83□□□□□ -0.36
TMTC3-204ENST00000551088 FHDC1Q9C0D6 1143 aaPredicted RBP12.83□□□□□ -0.36
TMTC3-204ENST00000551088 MAP3K19Q56UN5 1328 aa12.83□□□□□ -0.36
TMTC3-204ENST00000551088 SNRPBP14678 240 aaKnown RBP12.82□□□□□ -0.36
TMTC3-204ENST00000551088 CSPP1Q1MSJ5 1256 aa12.82□□□□□ -0.36
TMTC3-204ENST00000551088 SYT17Q9BSW7 474 aa12.82□□□□□ -0.36
TMTC3-204ENST00000551088 TAF1LQ8IZX4 1826 aa12.82□□□□□ -0.36
TMTC3-204ENST00000551088 COL24A1Q17RW2 1714 aa12.82□□□□□ -0.36
TMTC3-204ENST00000551088 ZNF827Q17R98 1081 aa12.81□□□□□ -0.36
TMTC3-204ENST00000551088 LYPD8Q6UX82 237 aa12.81□□□□□ -0.36
TMTC3-204ENST00000551088 LRRC4BQ9NT99 713 aa12.81□□□□□ -0.36
TMTC3-204ENST00000551088 TLL2Q9Y6L7 1015 aa12.81□□□□□ -0.36
TMTC3-204ENST00000551088 ANKRD36BQ8N2N9 1353 aa12.81□□□□□ -0.36
TMTC3-204ENST00000551088 TMF1P82094 1093 aa12.8□□□□□ -0.36
TMTC3-204ENST00000551088 RRS1Q15050 365 aaKnown RBP12.8□□□□□ -0.36
TMTC3-204ENST00000551088 LCE2AQ5TA79 106 aaPredicted RBP12.8□□□□□ -0.36
TMTC3-204ENST00000551088 PRPF38BQ5VTL8 546 aaKnown RBP12.8□□□□□ -0.36
TMTC3-204ENST00000551088 ZCRB1Q8TBF4 217 aaKnown RBP12.8□□□□□ -0.36
TMTC3-204ENST00000551088 KIFC2Q96AC6 838 aa12.8□□□□□ -0.36
TMTC3-204ENST00000551088 PCMTD1Q96MG8 357 aaPredicted RBP12.8□□□□□ -0.36
TMTC3-204ENST00000551088 C5P01031 1676 aa12.8□□□□□ -0.36
TMTC3-204ENST00000551088 WFS1O76024 890 aa12.79□□□□□ -0.36
TMTC3-204ENST00000551088 FLIIQ13045 1269 aa12.79□□□□□ -0.36
TMTC3-204ENST00000551088 SLC27A3Q5K4L6 730 aa12.79□□□□□ -0.36
TMTC3-204ENST00000551088 GGNBP2Q9H3C7 697 aa12.79□□□□□ -0.36
TMTC3-204ENST00000551088 GOPCQ9HD26 462 aa12.79□□□□□ -0.36
TMTC3-204ENST00000551088 SMG6Q86US8 1419 aaKnown RBP12.79□□□□□ -0.36
TMTC3-204ENST00000551088 MEGF6O75095 1541 aa12.78□□□□□ -0.36
TMTC3-204ENST00000551088 CAPN5O15484 640 aaPredicted RBP12.78□□□□□ -0.36
TMTC3-204ENST00000551088 VARSP26640 1264 aaKnown RBP12.78□□□□□ -0.36
TMTC3-204ENST00000551088 KCNQ4P56696 695 aa12.78□□□□□ -0.36
TMTC3-204ENST00000551088 USHBP1Q8N6Y0 703 aa12.78□□□□□ -0.36
TMTC3-204ENST00000551088 ARID3AQ99856 593 aa12.78□□□□□ -0.36
TMTC3-204ENST00000551088 TFCP2L1Q9NZI6 479 aa12.78□□□□□ -0.36
TMTC3-204ENST00000551088 RTL1A6NKG5 1358 aa12.78□□□□□ -0.36
TMTC3-204ENST00000551088 USP47Q96K76 1375 aa12.78□□□□□ -0.36
TMTC3-204ENST00000551088 GOLGB1Q14789 3259 aaKnown RBP12.77□□□□□ -0.36
TMTC3-204ENST00000551088 FYB1O15117 783 aa12.77□□□□□ -0.37
TMTC3-204ENST00000551088 POLD1P28340 1107 aa12.77□□□□□ -0.37
TMTC3-204ENST00000551088 BMP1P13497 986 aa12.76□□□□□ -0.37
TMTC3-204ENST00000551088 MYSM1Q5VVJ2 828 aa12.76□□□□□ -0.37
TMTC3-204ENST00000551088 NBPF6Q5VWK0 638 aa12.76□□□□□ -0.37
TMTC3-204ENST00000551088 SLC16A10Q8TF71 515 aa12.76□□□□□ -0.37
TMTC3-204ENST00000551088 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
TMTC3-204ENST00000551088 TSC1Q92574 1164 aa12.76□□□□□ -0.37
TMTC3-204ENST00000551088 NBPF4Q96M43 638 aa12.76□□□□□ -0.37
TMTC3-204ENST00000551088 MAP10Q9P2G4 905 aa12.76□□□□□ -0.37
TMTC3-204ENST00000551088 TATP17735 454 aaPredicted RBP12.75□□□□□ -0.37
TMTC3-204ENST00000551088 GPR162Q16538 588 aa12.75□□□□□ -0.37
TMTC3-204ENST00000551088 CDCA8Q53HL2 280 aa12.75□□□□□ -0.37
TMTC3-204ENST00000551088 PNPLA7Q6ZV29 1317 aa12.75□□□□□ -0.37
TMTC3-204ENST00000551088 CCNL1Q9UK58 526 aaPredicted RBP12.75□□□□□ -0.37
TMTC3-204ENST00000551088 PKD1L3Q7Z443 1732 aa12.74□□□□□ -0.37
TMTC3-204ENST00000551088 TOGARAM1Q9Y4F4 1720 aa12.74□□□□□ -0.37
TMTC3-204ENST00000551088 NSD2O96028 1365 aa12.74□□□□□ -0.37
TMTC3-204ENST00000551088 CGNL1Q0VF96 1302 aa12.74□□□□□ -0.37
TMTC3-204ENST00000551088 TRIM26Q12899 539 aaPredicted RBP12.74□□□□□ -0.37
TMTC3-204ENST00000551088 NFX1Q12986 1120 aaKnown RBP12.74□□□□□ -0.37
TMTC3-204ENST00000551088 LIMD1Q9UGP4 676 aa12.74□□□□□ -0.37
TMTC3-204ENST00000551088 ANKRD26Q9UPS8 1709 aa12.74□□□□□ -0.37
TMTC3-204ENST00000551088 MAP3K5Q99683 1374 aa12.73□□□□□ -0.37
TMTC3-204ENST00000551088 F12P00748 615 aaPredicted RBP12.73□□□□□ -0.37
TMTC3-204ENST00000551088 HSP90AB2PQ58FF8 381 aa12.73□□□□□ -0.37
TMTC3-204ENST00000551088 ZNF784Q8NCA9 323 aaPredicted RBP12.73□□□□□ -0.37
TMTC3-204ENST00000551088 UBR3Q6ZT12 1888 aa12.72□□□□□ -0.37
TMTC3-204ENST00000551088 INSRP06213 1382 aa12.72□□□□□ -0.37
TMTC3-204ENST00000551088 FLT4P35916 1363 aa12.72□□□□□ -0.37
TMTC3-204ENST00000551088 NNTQ13423 1086 aa12.72□□□□□ -0.37
TMTC3-204ENST00000551088 QPCTQ16769 361 aa12.72□□□□□ -0.37
TMTC3-204ENST00000551088 PCDH11XQ9BZA7 1347 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms