RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 CDHR2Q9BYE9 1310 aa18.71■□□□□ 0.59
SCN8A-206ENST00000550891 ZKSCAN1P17029 563 aaPredicted RBP18.71■□□□□ 0.59
SCN8A-206ENST00000550891 NMIQ13287 307 aaPredicted RBP18.71■□□□□ 0.59
SCN8A-206ENST00000550891 TIMM10P62072 90 aa18.7■□□□□ 0.58
SCN8A-206ENST00000550891 NOL8Q76FK4 1167 aaKnown RBP18.7■□□□□ 0.58
SCN8A-206ENST00000550891 SPATA31A6Q5VVP1 1343 aa18.7■□□□□ 0.58
SCN8A-206ENST00000550891 CWC22Q9HCG8 908 aaKnown RBP18.7■□□□□ 0.58
SCN8A-206ENST00000550891 ANKRD18BA2A2Z9 1011 aa18.69■□□□□ 0.58
SCN8A-206ENST00000550891 EIF5P55010 431 aaKnown RBP18.69■□□□□ 0.58
SCN8A-206ENST00000550891 FAM227BQ96M60 508 aa18.69■□□□□ 0.58
SCN8A-206ENST00000550891 KCNQ2O43526 872 aa18.69■□□□□ 0.58
SCN8A-206ENST00000550891 A0A1B0GUL7 405 aa18.69■□□□□ 0.58
SCN8A-206ENST00000550891 CNNM1Q9NRU3 951 aa18.69■□□□□ 0.58
SCN8A-206ENST00000550891 CTSWP56202 376 aa18.68■□□□□ 0.58
SCN8A-206ENST00000550891 CCDC158Q5M9N0 1113 aa18.68■□□□□ 0.58
SCN8A-206ENST00000550891 LDHAL6AQ6ZMR3 332 aa18.68■□□□□ 0.58
SCN8A-206ENST00000550891 PUS3Q9BZE2 481 aaKnown RBP18.68■□□□□ 0.58
SCN8A-206ENST00000550891 FAM177BA6PVY3 158 aa18.68■□□□□ 0.58
SCN8A-206ENST00000550891 MCM4P33991 863 aa18.68■□□□□ 0.58
SCN8A-206ENST00000550891 RNF20Q5VTR2 975 aa18.68■□□□□ 0.58
SCN8A-206ENST00000550891 INTS5Q6P9B9 1019 aaKnown RBP18.68■□□□□ 0.58
SCN8A-206ENST00000550891 EDC3Q96F86 508 aaKnown RBP18.68■□□□□ 0.58
SCN8A-206ENST00000550891 HAUS7Q99871 368 aa18.68■□□□□ 0.58
SCN8A-206ENST00000550891 CCDC171Q6TFL3 1326 aa18.68■□□□□ 0.58
SCN8A-206ENST00000550891 PDE8AO60658 829 aa18.68■□□□□ 0.58
SCN8A-206ENST00000550891 ITGA6P23229 1130 aa18.68■□□□□ 0.58
SCN8A-206ENST00000550891 NUCB2P80303 420 aa18.68■□□□□ 0.58
SCN8A-206ENST00000550891 PRPF40BQ6NWY9 871 aaKnown RBP18.68■□□□□ 0.58
SCN8A-206ENST00000550891 ZNF652Q9Y2D9 606 aa18.68■□□□□ 0.58
SCN8A-206ENST00000550891 TJP1Q07157 1748 aa18.68■□□□□ 0.58
SCN8A-206ENST00000550891 DDX11L8A8MPP1 907 aa18.67■□□□□ 0.58
SCN8A-206ENST00000550891 CSF1RP07333 972 aa18.67■□□□□ 0.58
SCN8A-206ENST00000550891 IFIT1P09914 478 aaKnown RBP18.67■□□□□ 0.58
SCN8A-206ENST00000550891 HSP90B1P14625 803 aaKnown RBP18.67■□□□□ 0.58
SCN8A-206ENST00000550891 METTL24Q5JXM2 366 aa18.67■□□□□ 0.58
SCN8A-206ENST00000550891 SYNE4Q8N205 404 aa18.67■□□□□ 0.58
SCN8A-206ENST00000550891 FNBP4Q8N3X1 1017 aaPredicted RBP18.67■□□□□ 0.58
SCN8A-206ENST00000550891 SNX14Q9Y5W7 946 aa18.67■□□□□ 0.58
SCN8A-206ENST00000550891 DDIT3P35638 169 aa18.67■□□□□ 0.58
SCN8A-206ENST00000550891 ITPK1Q13572 414 aa18.67■□□□□ 0.58
SCN8A-206ENST00000550891 AEBP2Q6ZN18 517 aaPredicted RBP18.67■□□□□ 0.58
SCN8A-206ENST00000550891 DDX46Q7L014 1031 aaKnown RBP18.67■□□□□ 0.58
SCN8A-206ENST00000550891 TMX3Q96JJ7 454 aa18.67■□□□□ 0.58
SCN8A-206ENST00000550891 SH3TC1Q8TE82 1336 aa18.66■□□□□ 0.58
SCN8A-206ENST00000550891 TTC39AQ5SRH9 613 aa18.66■□□□□ 0.58
SCN8A-206ENST00000550891 TTLL11Q8NHH1 800 aa18.66■□□□□ 0.58
SCN8A-206ENST00000550891 BCL9LQ86UU0 1499 aa18.66■□□□□ 0.58
SCN8A-206ENST00000550891 A0A0D9SFI3 127 aa18.66■□□□□ 0.58
SCN8A-206ENST00000550891 GOLGA6L22H0YM25 854 aa18.66■□□□□ 0.58
SCN8A-206ENST00000550891 PTH1RQ03431 593 aa18.66■□□□□ 0.58
SCN8A-206ENST00000550891 RAB3GAP1Q15042 981 aa18.66■□□□□ 0.58
SCN8A-206ENST00000550891 PARP10Q53GL7 1025 aa18.66■□□□□ 0.58
SCN8A-206ENST00000550891 TNPO1Q92973 898 aaKnown RBP18.66■□□□□ 0.58
SCN8A-206ENST00000550891 GREM2Q9H772 168 aa18.66■□□□□ 0.58
SCN8A-206ENST00000550891 NDUFB9Q9Y6M9 179 aa18.66■□□□□ 0.58
SCN8A-206ENST00000550891 GOLIM4O00461 696 aa18.65■□□□□ 0.58
SCN8A-206ENST00000550891 ZNF34Q8IZ26 560 aa18.65■□□□□ 0.58
SCN8A-206ENST00000550891 UTP14AQ9BVJ6 771 aaKnown RBP18.65■□□□□ 0.58
SCN8A-206ENST00000550891 PAG1Q9NWQ8 432 aa18.65■□□□□ 0.58
SCN8A-206ENST00000550891 RBM8AQ9Y5S9 174 aaKnown RBP18.65■□□□□ 0.58
SCN8A-206ENST00000550891 GSE1Q14687 1217 aa18.65■□□□□ 0.58
SCN8A-206ENST00000550891 LRRFIP1Q32MZ4 808 aaKnown RBP18.65■□□□□ 0.58
SCN8A-206ENST00000550891 NIP7Q9Y221 180 aaKnown RBP eCLIP18.64■□□□□ 0.58
SCN8A-206ENST00000550891 CASTP20810 708 aaKnown RBP18.64■□□□□ 0.57
SCN8A-206ENST00000550891 KBTBD3Q8NAB2 608 aa18.64■□□□□ 0.57
SCN8A-206ENST00000550891 JAKMIP1Q96N16 626 aaKnown RBP18.64■□□□□ 0.57
SCN8A-206ENST00000550891 CERKQ8TCT0 537 aa18.63■□□□□ 0.57
SCN8A-206ENST00000550891 IL17RAQ96F46 866 aa18.63■□□□□ 0.57
SCN8A-206ENST00000550891 ZNF609O15014 1411 aa18.63■□□□□ 0.57
SCN8A-206ENST00000550891 UBN2Q6ZU65 1347 aa18.63■□□□□ 0.57
SCN8A-206ENST00000550891 RASEFQ8IZ41 740 aa18.63■□□□□ 0.57
SCN8A-206ENST00000550891 CYP46A1Q9Y6A2 500 aa18.63■□□□□ 0.57
SCN8A-206ENST00000550891 RFX7Q2KHR2 1363 aa18.63■□□□□ 0.57
SCN8A-206ENST00000550891 FKBP4Q02790 459 aaKnown RBP eCLIP18.62■□□□□ 0.57
SCN8A-206ENST00000550891 ATP2B3Q16720 1220 aa18.62■□□□□ 0.57
SCN8A-206ENST00000550891 AK7Q96M32 723 aa18.62■□□□□ 0.57
SCN8A-206ENST00000550891 PSMA5P28066 241 aa18.62■□□□□ 0.57
SCN8A-206ENST00000550891 MAP4K1Q92918 833 aa18.62■□□□□ 0.57
SCN8A-206ENST00000550891 ZGPATQ8N5A5 531 aaKnown RBP18.62■□□□□ 0.57
SCN8A-206ENST00000550891 XAGE2Q96GT9 111 aa18.62■□□□□ 0.57
SCN8A-206ENST00000550891 PTMSP20962 102 aa18.61■□□□□ 0.57
SCN8A-206ENST00000550891 MCMDC2Q4G0Z9 681 aa18.61■□□□□ 0.57
SCN8A-206ENST00000550891 SUSD4Q5VX71 490 aa18.61■□□□□ 0.57
SCN8A-206ENST00000550891 CREB3L3Q68CJ9 461 aa18.61■□□□□ 0.57
SCN8A-206ENST00000550891 CAMTA2O94983 1202 aa18.61■□□□□ 0.57
SCN8A-206ENST00000550891 HCLS1P14317 486 aaPredicted RBP18.61■□□□□ 0.57
SCN8A-206ENST00000550891 MPHOSPH8Q99549 860 aa18.61■□□□□ 0.57
SCN8A-206ENST00000550891 SSFA2P28290 1259 aa18.61■□□□□ 0.57
SCN8A-206ENST00000550891 NECTIN1Q15223 517 aa18.6■□□□□ 0.57
SCN8A-206ENST00000550891 GTF2E1P29083 439 aaPredicted RBP18.59■□□□□ 0.57
SCN8A-206ENST00000550891 SNRKQ9NRH2 765 aa18.59■□□□□ 0.57
SCN8A-206ENST00000550891 PDRG1Q9NUG6 133 aa18.59■□□□□ 0.57
SCN8A-206ENST00000550891 HMG20BQ9P0W2 317 aa18.59■□□□□ 0.57
SCN8A-206ENST00000550891 CCDC152Q4G0S7 254 aa18.59■□□□□ 0.57
SCN8A-206ENST00000550891 ZNF589Q86UQ0 364 aaPredicted RBP18.59■□□□□ 0.57
SCN8A-206ENST00000550891 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.59■□□□□ 0.57
SCN8A-206ENST00000550891 INTS4Q96HW7 963 aaKnown RBP18.59■□□□□ 0.57
SCN8A-206ENST00000550891 TM6SF1Q9BZW5 370 aa18.59■□□□□ 0.57
SCN8A-206ENST00000550891 MED23Q9ULK4 1368 aa18.59■□□□□ 0.57
SCN8A-206ENST00000550891 TICAM2Q86XR7 235 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms