RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 GTF2IP78347 998 aa7.01□□□□□ -1.29
TSPAN8-205ENST00000550818 KANK4Q5T7N3 995 aaPredicted RBP7.01□□□□□ -1.29
TSPAN8-205ENST00000550818 POTEAQ6S8J7 498 aa7.01□□□□□ -1.29
TSPAN8-205ENST00000550818 USTQ9Y2C2 406 aa7.01□□□□□ -1.29
TSPAN8-205ENST00000550818 LZTS3O60299 673 aaPredicted RBP7□□□□□ -1.29
TSPAN8-205ENST00000550818 ADAMTS4O75173 837 aa7□□□□□ -1.29
TSPAN8-205ENST00000550818 PLAURQ03405 335 aa7□□□□□ -1.29
TSPAN8-205ENST00000550818 DEPDC4Q8N2C3 294 aa7□□□□□ -1.29
TSPAN8-205ENST00000550818 GSX2Q9BZM3 304 aa7□□□□□ -1.29
TSPAN8-205ENST00000550818 PHACTR1Q9C0D0 580 aa7□□□□□ -1.29
TSPAN8-205ENST00000550818 EFCC1Q9HA90 598 aa7□□□□□ -1.29
TSPAN8-205ENST00000550818 PSME1Q06323 249 aa6.99□□□□□ -1.29
TSPAN8-205ENST00000550818 NCOA4Q13772 614 aa6.99□□□□□ -1.29
TSPAN8-205ENST00000550818 FAM35AQ86V20 835 aa6.99□□□□□ -1.29
TSPAN8-205ENST00000550818 DLL1O00548 723 aa6.98□□□□□ -1.29
TSPAN8-205ENST00000550818 ALX3O95076 343 aa6.98□□□□□ -1.29
TSPAN8-205ENST00000550818 PSMA6P60900 246 aaKnown RBP6.98□□□□□ -1.29
TSPAN8-205ENST00000550818 ELOAQ14241 798 aaKnown RBP6.98□□□□□ -1.29
TSPAN8-205ENST00000550818 EML3Q32P44 896 aa6.98□□□□□ -1.29
TSPAN8-205ENST00000550818 BTLAQ7Z6A9 289 aa6.98□□□□□ -1.29
TSPAN8-205ENST00000550818 LPIN3Q9BQK8 851 aa6.98□□□□□ -1.29
TSPAN8-205ENST00000550818 AKTIPQ9H8T0 292 aa6.98□□□□□ -1.29
TSPAN8-205ENST00000550818 MKRN1Q9UHC7 482 aaKnown RBP6.98□□□□□ -1.29
TSPAN8-205ENST00000550818 NOD1Q9Y239 953 aa6.98□□□□□ -1.29
TSPAN8-205ENST00000550818 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.98□□□□□ -1.29
TSPAN8-205ENST00000550818 TGFB1P01137 390 aa6.97□□□□□ -1.29
TSPAN8-205ENST00000550818 CPB1P15086 417 aa6.97□□□□□ -1.29
TSPAN8-205ENST00000550818 NFKB1P19838 968 aa6.97□□□□□ -1.29
TSPAN8-205ENST00000550818 PERM1Q5SV97 790 aa6.97□□□□□ -1.29
TSPAN8-205ENST00000550818 WFDC8Q8IUA0 241 aa6.97□□□□□ -1.29
TSPAN8-205ENST00000550818 TSPAN10Q9H1Z9 355 aaPredicted RBP6.97□□□□□ -1.29
TSPAN8-205ENST00000550818 FRRS1LQ9P0K9 344 aa6.97□□□□□ -1.29
TSPAN8-205ENST00000550818 ZBTB7CA1YPR0 619 aa6.96□□□□□ -1.3
TSPAN8-205ENST00000550818 TMEM88BA6NKF7 163 aa6.96□□□□□ -1.3
TSPAN8-205ENST00000550818 FAM196BA6NMK8 535 aa6.96□□□□□ -1.3
TSPAN8-205ENST00000550818 PODXL2Q9NZ53 605 aa6.96□□□□□ -1.3
TSPAN8-205ENST00000550818 USP17L15C9J2P7 530 aa6.95□□□□□ -1.3
TSPAN8-205ENST00000550818 USP17L10C9JJH3 530 aa6.95□□□□□ -1.3
TSPAN8-205ENST00000550818 USP17L13C9JLJ4 530 aa6.95□□□□□ -1.3
TSPAN8-205ENST00000550818 USP17L12C9JPN9 530 aa6.95□□□□□ -1.3
TSPAN8-205ENST00000550818 USP17L11C9JVI0 530 aa6.95□□□□□ -1.3
TSPAN8-205ENST00000550818 USP17L21D6R901 530 aa6.95□□□□□ -1.3
TSPAN8-205ENST00000550818 USP17L18D6R9N7 530 aa6.95□□□□□ -1.3
TSPAN8-205ENST00000550818 USP17L22D6RA61 530 aa6.95□□□□□ -1.3
TSPAN8-205ENST00000550818 USP17L17D6RBQ6 530 aa6.95□□□□□ -1.3
TSPAN8-205ENST00000550818 USP17L19D6RCP7 530 aa6.95□□□□□ -1.3
TSPAN8-205ENST00000550818 USP17L20D6RJB6 530 aa6.95□□□□□ -1.3
TSPAN8-205ENST00000550818 USP17L24Q0WX57 530 aa6.95□□□□□ -1.3
TSPAN8-205ENST00000550818 TMEM130Q8N3G9 435 aa6.95□□□□□ -1.3
TSPAN8-205ENST00000550818 PNMA5Q96PV4 448 aa6.95□□□□□ -1.3
TSPAN8-205ENST00000550818 ZMIZ1Q9ULJ6 1067 aa6.95□□□□□ -1.3
TSPAN8-205ENST00000550818 CARNS1A5YM72 827 aa6.94□□□□□ -1.3
TSPAN8-205ENST00000550818 ZBTB42B2RXF5 422 aa6.94□□□□□ -1.3
TSPAN8-205ENST00000550818 F8W735 103 aaPredicted RBP6.94□□□□□ -1.3
TSPAN8-205ENST00000550818 IGLV1-40P01703 118 aa6.94□□□□□ -1.3
TSPAN8-205ENST00000550818 SPINK2P20155 84 aa6.94□□□□□ -1.3
TSPAN8-205ENST00000550818 RASA1P20936 1047 aa6.94□□□□□ -1.3
TSPAN8-205ENST00000550818 JAG1P78504 1218 aa6.94□□□□□ -1.3
TSPAN8-205ENST00000550818 PTK7Q13308 1070 aa6.94□□□□□ -1.3
TSPAN8-205ENST00000550818 CCINQ13939 588 aa6.94□□□□□ -1.3
TSPAN8-205ENST00000550818 CRTC2Q53ET0 693 aaPredicted RBP6.94□□□□□ -1.3
TSPAN8-205ENST00000550818 LARP1Q6PKG0 1096 aaKnown RBP6.94□□□□□ -1.3
TSPAN8-205ENST00000550818 TRIM50Q86XT4 487 aa6.94□□□□□ -1.3
TSPAN8-205ENST00000550818 AEBP1Q8IUX7 1158 aa6.94□□□□□ -1.3
TSPAN8-205ENST00000550818 TTC9Q92623 222 aa6.94□□□□□ -1.3
TSPAN8-205ENST00000550818 NOVA2Q9UNW9 492 aaKnown RBP6.94□□□□□ -1.3
TSPAN8-205ENST00000550818 TMEM164Q5U3C3 297 aa6.93□□□□□ -1.3
TSPAN8-205ENST00000550818 Q6ZS46 218 aa6.93□□□□□ -1.3
TSPAN8-205ENST00000550818 OGFOD1Q8N543 542 aa6.93□□□□□ -1.3
TSPAN8-205ENST00000550818 STK32AQ8WU08 396 aa6.93□□□□□ -1.3
TSPAN8-205ENST00000550818 PTCD1O75127 700 aaKnown RBP6.92□□□□□ -1.3
TSPAN8-205ENST00000550818 MAP3K6O95382 1288 aa6.92□□□□□ -1.3
TSPAN8-205ENST00000550818 BRD1O95696 1058 aa6.92□□□□□ -1.3
TSPAN8-205ENST00000550818 GRNP28799 593 aaKnown RBP6.92□□□□□ -1.3
TSPAN8-205ENST00000550818 ATP1A2P50993 1020 aa6.92□□□□□ -1.3
TSPAN8-205ENST00000550818 CLDN10P78369 228 aa6.92□□□□□ -1.3
TSPAN8-205ENST00000550818 PCSK7Q16549 785 aa6.92□□□□□ -1.3
TSPAN8-205ENST00000550818 ELMSAN1Q6PJG2 1045 aa6.92□□□□□ -1.3
TSPAN8-205ENST00000550818 ZDHHC13Q8IUH4 622 aa6.92□□□□□ -1.3
TSPAN8-205ENST00000550818 ALDH16A1Q8IZ83 802 aa6.92□□□□□ -1.3
TSPAN8-205ENST00000550818 TRPM4Q8TD43 1214 aa6.92□□□□□ -1.3
TSPAN8-205ENST00000550818 MRPL18Q9H0U6 180 aaKnown RBP6.92□□□□□ -1.3
TSPAN8-205ENST00000550818 KIAA1024Q9UPX6 916 aa6.92□□□□□ -1.3
TSPAN8-205ENST00000550818 RAXQ9Y2V3 346 aa6.92□□□□□ -1.3
TSPAN8-205ENST00000550818 ZBTB7BO15156 539 aaPredicted RBP6.91□□□□□ -1.3
TSPAN8-205ENST00000550818 ANKMY2Q8IV38 441 aa6.91□□□□□ -1.3
TSPAN8-205ENST00000550818 LARGE2Q8N3Y3 721 aa6.91□□□□□ -1.3
TSPAN8-205ENST00000550818 FAM200AQ8TCP9 573 aa6.91□□□□□ -1.3
TSPAN8-205ENST00000550818 ZFATQ9P243 1243 aa6.91□□□□□ -1.3
TSPAN8-205ENST00000550818 CHMP3Q9Y3E7 222 aa6.91□□□□□ -1.3
TSPAN8-205ENST00000550818 GSC2O15499 205 aa6.9□□□□□ -1.3
TSPAN8-205ENST00000550818 C21orf2O43822 256 aa6.9□□□□□ -1.3
TSPAN8-205ENST00000550818 MLLT1Q03111 559 aaPredicted RBP6.9□□□□□ -1.3
TSPAN8-205ENST00000550818 TPCN2Q8NHX9 752 aa6.9□□□□□ -1.3
TSPAN8-205ENST00000550818 ZNF594Q96JF6 807 aaPredicted RBP6.9□□□□□ -1.3
TSPAN8-205ENST00000550818 STOML1Q9UBI4 398 aa6.9□□□□□ -1.3
TSPAN8-205ENST00000550818 DMGDHQ9UI17 866 aaKnown RBP6.9□□□□□ -1.3
TSPAN8-205ENST00000550818 PATL2C9JE40 543 aaKnown RBP6.89□□□□□ -1.31
TSPAN8-205ENST00000550818 KCNA1Q09470 495 aa6.89□□□□□ -1.31
TSPAN8-205ENST00000550818 DPYDQ12882 1025 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms