RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 STX8Q9UNK0 236 aa14.28□□□□□ -0.12
NR4A1-215ENST00000550557 EVI5LQ96CN4 794 aa14.28□□□□□ -0.12
NR4A1-215ENST00000550557 PLCG2P16885 1265 aa14.28□□□□□ -0.12
NR4A1-215ENST00000550557 ODF2Q5BJF6 829 aa14.28□□□□□ -0.12
NR4A1-215ENST00000550557 PLBD2Q8NHP8 589 aa14.28□□□□□ -0.12
NR4A1-215ENST00000550557 RNF17Q9BXT8 1623 aaKnown RBP14.28□□□□□ -0.12
NR4A1-215ENST00000550557 IL13P35225 146 aa14.27□□□□□ -0.12
NR4A1-215ENST00000550557 TNNT3P45378 269 aaPredicted RBP14.27□□□□□ -0.12
NR4A1-215ENST00000550557 PRPF40BQ6NWY9 871 aaKnown RBP14.27□□□□□ -0.12
NR4A1-215ENST00000550557 CATIPQ7Z7H3 387 aa14.27□□□□□ -0.12
NR4A1-215ENST00000550557 NIM1KQ8IY84 436 aa14.27□□□□□ -0.12
NR4A1-215ENST00000550557 ZBTB40Q9NUA8 1239 aa14.27□□□□□ -0.12
NR4A1-215ENST00000550557 CCDC82Q8N4S0 544 aa14.27□□□□□ -0.13
NR4A1-215ENST00000550557 ZNF496Q96IT1 587 aaPredicted RBP14.27□□□□□ -0.13
NR4A1-215ENST00000550557 KINO60870 393 aaKnown RBP14.27□□□□□ -0.13
NR4A1-215ENST00000550557 KRT24Q2M2I5 525 aa14.27□□□□□ -0.13
NR4A1-215ENST00000550557 MEIS3Q99687 375 aa14.27□□□□□ -0.13
NR4A1-215ENST00000550557 SLC12A7Q9Y666 1083 aa14.27□□□□□ -0.13
NR4A1-215ENST00000550557 LDHBP07195 334 aaKnown RBP14.26□□□□□ -0.13
NR4A1-215ENST00000550557 SMC5Q8IY18 1101 aa14.26□□□□□ -0.13
NR4A1-215ENST00000550557 PPP4R3BQ5MIZ7 849 aa14.26□□□□□ -0.13
NR4A1-215ENST00000550557 RBM6P78332 1123 aaKnown RBP14.26□□□□□ -0.13
NR4A1-215ENST00000550557 RHPN1Q8TCX5 695 aa14.26□□□□□ -0.13
NR4A1-215ENST00000550557 ZSCAN31Q96LW9 406 aaPredicted RBP14.26□□□□□ -0.13
NR4A1-215ENST00000550557 KAT14Q9H8E8 782 aa14.26□□□□□ -0.13
NR4A1-215ENST00000550557 MATR3P43243 847 aaKnown RBP eCLIP14.26□□□□□ -0.13
NR4A1-215ENST00000550557 MFSD6Q6ZSS7 791 aa14.26□□□□□ -0.13
NR4A1-215ENST00000550557 ROBO2Q9HCK4 1378 aa14.26□□□□□ -0.13
NR4A1-215ENST00000550557 LARP1BQ659C4 914 aaKnown RBP14.25□□□□□ -0.13
NR4A1-215ENST00000550557 PPP4R3AQ6IN85 833 aa14.25□□□□□ -0.13
NR4A1-215ENST00000550557 VAT1LQ9HCJ6 419 aa14.25□□□□□ -0.13
NR4A1-215ENST00000550557 BABAM1Q9NWV8 329 aa14.25□□□□□ -0.13
NR4A1-215ENST00000550557 BIN2Q9UBW5 565 aaPredicted RBP14.25□□□□□ -0.13
NR4A1-215ENST00000550557 JAG2Q9Y219 1238 aa14.25□□□□□ -0.13
NR4A1-215ENST00000550557 LOC102724428A0A0B4J2F2 783 aa14.25□□□□□ -0.13
NR4A1-215ENST00000550557 CASTP20810 708 aaKnown RBP14.25□□□□□ -0.13
NR4A1-215ENST00000550557 SIK1P57059 783 aa14.25□□□□□ -0.13
NR4A1-215ENST00000550557 EAPPQ56P03 285 aaPredicted RBP14.25□□□□□ -0.13
NR4A1-215ENST00000550557 TMEM87AQ8NBN3 555 aa14.25□□□□□ -0.13
NR4A1-215ENST00000550557 PRPF40AO75400 957 aaKnown RBP14.25□□□□□ -0.13
NR4A1-215ENST00000550557 ZFYP08048 801 aaPredicted RBP14.25□□□□□ -0.13
NR4A1-215ENST00000550557 PHKG2P15735 406 aa14.25□□□□□ -0.13
NR4A1-215ENST00000550557 TSPYL6Q8N831 410 aa14.25□□□□□ -0.13
NR4A1-215ENST00000550557 FAM13BQ9NYF5 915 aa14.25□□□□□ -0.13
NR4A1-215ENST00000550557 CCDC39Q9UFE4 941 aa14.25□□□□□ -0.13
NR4A1-215ENST00000550557 SOS1Q07889 1333 aaPredicted RBP14.25□□□□□ -0.13
NR4A1-215ENST00000550557 ECM2O94769 699 aaPredicted RBP14.25□□□□□ -0.13
NR4A1-215ENST00000550557 KIF5BP33176 963 aa14.25□□□□□ -0.13
NR4A1-215ENST00000550557 VTI1AQ96AJ9 217 aa14.25□□□□□ -0.13
NR4A1-215ENST00000550557 ARHGAP31Q2M1Z3 1444 aa14.25□□□□□ -0.13
NR4A1-215ENST00000550557 ESPNB1AK53 854 aa14.24□□□□□ -0.13
NR4A1-215ENST00000550557 ZFYVE27Q5T4F4 411 aa14.24□□□□□ -0.13
NR4A1-215ENST00000550557 CCDC191Q8NCU4 936 aa14.24□□□□□ -0.13
NR4A1-215ENST00000550557 PDE8AO60658 829 aa14.24□□□□□ -0.13
NR4A1-215ENST00000550557 ARHGEF25Q86VW2 580 aa14.24□□□□□ -0.13
NR4A1-215ENST00000550557 PHAXQ9H814 394 aaKnown RBP14.24□□□□□ -0.13
NR4A1-215ENST00000550557 HMGB1P09429 215 aaKnown RBP14.24□□□□□ -0.13
NR4A1-215ENST00000550557 WDR17Q8IZU2 1322 aa14.24□□□□□ -0.13
NR4A1-215ENST00000550557 PPIP5K2O43314 1243 aa14.24□□□□□ -0.13
NR4A1-215ENST00000550557 MBD3O95983 291 aa14.24□□□□□ -0.13
NR4A1-215ENST00000550557 TSPY3P0CV98 308 aa14.24□□□□□ -0.13
NR4A1-215ENST00000550557 TSPY8P0CW00 308 aa14.24□□□□□ -0.13
NR4A1-215ENST00000550557 SLC9C2Q5TAH2 1124 aa14.23□□□□□ -0.13
NR4A1-215ENST00000550557 TBC1D9Q6ZT07 1266 aa14.23□□□□□ -0.13
NR4A1-215ENST00000550557 SLC4A4Q9Y6R1 1079 aa14.23□□□□□ -0.13
NR4A1-215ENST00000550557 A0A0U1RQG5 324 aaPredicted RBP14.23□□□□□ -0.13
NR4A1-215ENST00000550557 H7C1D1 291 aa14.23□□□□□ -0.13
NR4A1-215ENST00000550557 C2CD5Q86YS7 1000 aa14.23□□□□□ -0.13
NR4A1-215ENST00000550557 HOXB7P09629 217 aa14.23□□□□□ -0.13
NR4A1-215ENST00000550557 HAND2P61296 217 aa14.23□□□□□ -0.13
NR4A1-215ENST00000550557 TRAF1Q13077 416 aa14.23□□□□□ -0.13
NR4A1-215ENST00000550557 ME1P48163 572 aa14.22□□□□□ -0.13
NR4A1-215ENST00000550557 MPNDQ8N594 471 aa14.22□□□□□ -0.13
NR4A1-215ENST00000550557 DDX11Q96FC9 970 aa14.22□□□□□ -0.13
NR4A1-215ENST00000550557 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
NR4A1-215ENST00000550557 NAT10Q9H0A0 1025 aaKnown RBP14.22□□□□□ -0.13
NR4A1-215ENST00000550557 PDCL3Q9H2J4 239 aa14.22□□□□□ -0.13
NR4A1-215ENST00000550557 LMTK2Q8IWU2 1503 aa14.22□□□□□ -0.13
NR4A1-215ENST00000550557 FIBPO43427 364 aa14.22□□□□□ -0.13
NR4A1-215ENST00000550557 ITGA6P23229 1130 aa14.22□□□□□ -0.13
NR4A1-215ENST00000550557 CNKSR1Q969H4 720 aa14.22□□□□□ -0.13
NR4A1-215ENST00000550557 HIBADHP31937 336 aaKnown RBP14.22□□□□□ -0.13
NR4A1-215ENST00000550557 MAGEC2Q9UBF1 373 aaPredicted RBP14.22□□□□□ -0.13
NR4A1-215ENST00000550557 INO80Q9ULG1 1556 aaPredicted RBP14.21□□□□□ -0.13
NR4A1-215ENST00000550557 GOLGA8AA7E2F4 631 aa14.21□□□□□ -0.13
NR4A1-215ENST00000550557 GOLGA8BA8MQT2 603 aa14.21□□□□□ -0.13
NR4A1-215ENST00000550557 ANKRD44Q8N8A2 993 aa14.21□□□□□ -0.13
NR4A1-215ENST00000550557 METTL22Q9BUU2 404 aaPredicted RBP14.21□□□□□ -0.13
NR4A1-215ENST00000550557 PA2G4Q9UQ80 394 aaKnown RBP14.21□□□□□ -0.13
NR4A1-215ENST00000550557 STIM1Q13586 685 aa14.21□□□□□ -0.13
NR4A1-215ENST00000550557 CCDC12Q8WUD4 166 aaPredicted RBP14.21□□□□□ -0.13
NR4A1-215ENST00000550557 PLS1Q14651 629 aa14.21□□□□□ -0.13
NR4A1-215ENST00000550557 TMEM67Q5HYA8 995 aa14.21□□□□□ -0.13
NR4A1-215ENST00000550557 ABCA6Q8N139 1617 aa14.21□□□□□ -0.13
NR4A1-215ENST00000550557 ADGRB3O60242 1522 aa14.21□□□□□ -0.13
NR4A1-215ENST00000550557 CCDC194A0A1B0GVG4 234 aa14.21□□□□□ -0.14
NR4A1-215ENST00000550557 GPS2Q13227 327 aa14.2□□□□□ -0.14
NR4A1-215ENST00000550557 RNF214Q8ND24 703 aa14.2□□□□□ -0.14
NR4A1-215ENST00000550557 TNPO1Q92973 898 aaKnown RBP14.2□□□□□ -0.14
NR4A1-215ENST00000550557 A2ML1A8K2U0 1454 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms