RNA–Protein interactions for RNA: ENST00000550455.5

CCT2-209, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 2

Gene CCT2, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-209ENST00000550455 COPS6Q7L5N1 327 aa13.51□□□□□ -0.25
CCT2-209ENST00000550455 GRAPLQ8TC17 118 aaPredicted RBP13.51□□□□□ -0.25
CCT2-209ENST00000550455 GPR101Q96P66 508 aaPredicted RBP13.51□□□□□ -0.25
CCT2-209ENST00000550455 TRPM7Q96QT4 1865 aa13.5□□□□□ -0.25
CCT2-209ENST00000550455 SAPCD2Q86UD0 394 aa13.5□□□□□ -0.25
CCT2-209ENST00000550455 CHL1O00533 1208 aa13.49□□□□□ -0.25
CCT2-209ENST00000550455 TCERG1O14776 1098 aaKnown RBP13.49□□□□□ -0.25
CCT2-209ENST00000550455 CDC37L1Q7L3B6 337 aa13.49□□□□□ -0.25
CCT2-209ENST00000550455 DPF2Q92785 391 aa13.49□□□□□ -0.25
CCT2-209ENST00000550455 TRMT112Q9UI30 125 aaKnown RBP13.49□□□□□ -0.25
CCT2-209ENST00000550455 GMPSP49915 693 aaPredicted RBP13.48□□□□□ -0.25
CCT2-209ENST00000550455 PROSER3Q2NL68 480 aa13.48□□□□□ -0.25
CCT2-209ENST00000550455 CYP4F22Q6NT55 531 aa13.48□□□□□ -0.25
CCT2-209ENST00000550455 XAGE3Q8WTP9 111 aa13.48□□□□□ -0.25
CCT2-209ENST00000550455 ABHD8Q96I13 439 aa13.48□□□□□ -0.25
CCT2-209ENST00000550455 TRAF5O00463 557 aa13.47□□□□□ -0.25
CCT2-209ENST00000550455 CELF2O95319 508 aaKnown RBP13.47□□□□□ -0.25
CCT2-209ENST00000550455 BRPF1P55201 1214 aaPredicted RBP13.47□□□□□ -0.25
CCT2-209ENST00000550455 SF3B3Q15393 1217 aaKnown RBP13.47□□□□□ -0.25
CCT2-209ENST00000550455 PLBD2Q8NHP8 589 aa13.47□□□□□ -0.25
CCT2-209ENST00000550455 BCL2L13Q9BXK5 485 aa13.47□□□□□ -0.25
CCT2-209ENST00000550455 DBF4Q9UBU7 674 aaPredicted RBP13.47□□□□□ -0.25
CCT2-209ENST00000550455 H7C1D1 291 aa13.46□□□□□ -0.25
CCT2-209ENST00000550455 HCLS1P14317 486 aaPredicted RBP13.46□□□□□ -0.25
CCT2-209ENST00000550455 HSP90B1P14625 803 aaKnown RBP13.46□□□□□ -0.25
CCT2-209ENST00000550455 RPS12P25398 132 aaKnown RBP13.46□□□□□ -0.25
CCT2-209ENST00000550455 AIMP1Q12904 312 aaKnown RBP13.46□□□□□ -0.25
CCT2-209ENST00000550455 TRIM28Q13263 835 aaKnown RBP13.46□□□□□ -0.25
CCT2-209ENST00000550455 ANKRD13DQ6ZTN6 518 aa13.46□□□□□ -0.25
CCT2-209ENST00000550455 PAXIP1Q6ZW49 1069 aaPredicted RBP13.46□□□□□ -0.25
CCT2-209ENST00000550455 ISCA1Q9BUE6 129 aa13.46□□□□□ -0.25
CCT2-209ENST00000550455 CNOT7Q9UIV1 285 aaKnown RBP13.46□□□□□ -0.25
CCT2-209ENST00000550455 LRRC37AA6NMS7 1700 aa13.46□□□□□ -0.25
CCT2-209ENST00000550455 LAMB2P55268 1798 aa13.45□□□□□ -0.26
CCT2-209ENST00000550455 ANXA1P04083 346 aa13.45□□□□□ -0.26
CCT2-209ENST00000550455 RGS19P49795 217 aa13.45□□□□□ -0.26
CCT2-209ENST00000550455 HIRAP54198 1017 aaPredicted RBP13.45□□□□□ -0.26
CCT2-209ENST00000550455 FMR1Q06787 632 aaKnown RBP eCLIP13.45□□□□□ -0.262e-6■□□□□ 10.3
CCT2-209ENST00000550455 WASHC4Q2M389 1173 aa13.45□□□□□ -0.26
CCT2-209ENST00000550455 HYPKQ9NX55 129 aa13.45□□□□□ -0.26
CCT2-209ENST00000550455 RAD17O75943 681 aa13.44□□□□□ -0.26
CCT2-209ENST00000550455 NOGQ13253 232 aa13.44□□□□□ -0.26
CCT2-209ENST00000550455 HDGFL1Q5TGJ6 251 aa13.44□□□□□ -0.26
CCT2-209ENST00000550455 SLC51AQ86UW1 340 aa13.44□□□□□ -0.26
CCT2-209ENST00000550455 RUNDC1Q96C34 613 aa13.44□□□□□ -0.26
CCT2-209ENST00000550455 EYA3Q99504 573 aa13.44□□□□□ -0.26
CCT2-209ENST00000550455 GLIS2Q9BZE0 524 aaPredicted RBP13.44□□□□□ -0.26
CCT2-209ENST00000550455 DUOX1Q9NRD9 1551 aa13.44□□□□□ -0.26
CCT2-209ENST00000550455 MYBBP1AQ9BQG0 1328 aaKnown RBP13.43□□□□□ -0.26
CCT2-209ENST00000550455 YDJCA8MPS7 323 aa13.43□□□□□ -0.26
CCT2-209ENST00000550455 CFAP44Q96MT7 982 aa13.43□□□□□ -0.26
CCT2-209ENST00000550455 CHMP4AQ9BY43 222 aa13.43□□□□□ -0.26
CCT2-209ENST00000550455 CHPF2Q9P2E5 772 aa13.43□□□□□ -0.26
CCT2-209ENST00000550455 TRIM35Q9UPQ4 493 aa13.43□□□□□ -0.26
CCT2-209ENST00000550455 SLC34A2O95436 690 aa13.42□□□□□ -0.26
CCT2-209ENST00000550455 MICALL2Q8IY33 904 aa13.42□□□□□ -0.26
CCT2-209ENST00000550455 PODXL2Q9NZ53 605 aa13.42□□□□□ -0.26
CCT2-209ENST00000550455 NSFL1CQ9UNZ2 370 aaKnown RBP13.42□□□□□ -0.26
CCT2-209ENST00000550455 ZNF609O15014 1411 aa13.41□□□□□ -0.26
CCT2-209ENST00000550455 AOC2O75106 756 aa13.41□□□□□ -0.26
CCT2-209ENST00000550455 RPS8P62241 208 aaKnown RBP13.41□□□□□ -0.26
CCT2-209ENST00000550455 GRM1Q13255 1194 aa13.41□□□□□ -0.26
CCT2-209ENST00000550455 TRPM4Q8TD43 1214 aa13.41□□□□□ -0.26
CCT2-209ENST00000550455 NECTIN2Q92692 538 aa13.41□□□□□ -0.26
CCT2-209ENST00000550455 CCDC102AQ96A19 550 aa13.41□□□□□ -0.26
CCT2-209ENST00000550455 FAM89AQ96GI7 184 aa13.41□□□□□ -0.26
CCT2-209ENST00000550455 DDX60Q8IY21 1712 aaKnown RBP13.41□□□□□ -0.26
CCT2-209ENST00000550455 PSMD14O00487 310 aa13.4□□□□□ -0.26
CCT2-209ENST00000550455 WDR43Q15061 677 aaKnown RBP eCLIP13.4□□□□□ -0.26
CCT2-209ENST00000550455 CELF1Q92879 486 aaKnown RBP13.4□□□□□ -0.26
CCT2-209ENST00000550455 SAGE1Q9NXZ1 904 aa13.4□□□□□ -0.26
CCT2-209ENST00000550455 C6orf229H3BNL8 230 aa13.39□□□□□ -0.27
CCT2-209ENST00000550455 IRS4O14654 1257 aaPredicted RBP13.39□□□□□ -0.27
CCT2-209ENST00000550455 VIL1P09327 827 aaKnown RBP13.39□□□□□ -0.27
CCT2-209ENST00000550455 HUNKP57058 714 aa13.39□□□□□ -0.27
CCT2-209ENST00000550455 MLLT1Q03111 559 aaPredicted RBP13.39□□□□□ -0.27
CCT2-209ENST00000550455 CALD1Q05682 793 aaKnown RBP13.39□□□□□ -0.27
CCT2-209ENST00000550455 NEUROD2Q15784 382 aa13.39□□□□□ -0.27
CCT2-209ENST00000550455 KRT24Q2M2I5 525 aa13.39□□□□□ -0.27
CCT2-209ENST00000550455 KRT26Q7Z3Y9 468 aa13.39□□□□□ -0.27
CCT2-209ENST00000550455 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
CCT2-209ENST00000550455 C2orf69Q8N8R5 385 aa13.39□□□□□ -0.27
CCT2-209ENST00000550455 ZBTB38Q8NAP3 1195 aaPredicted RBP13.39□□□□□ -0.27
CCT2-209ENST00000550455 TBC1D16Q8TBP0 767 aa13.39□□□□□ -0.27
CCT2-209ENST00000550455 DCPSQ96C86 337 aaKnown RBP13.39□□□□□ -0.27
CCT2-209ENST00000550455 ZC3H12CQ9C0D7 883 aaKnown RBP13.39□□□□□ -0.27
CCT2-209ENST00000550455 POLLQ9UGP5 575 aa13.39□□□□□ -0.27
CCT2-209ENST00000550455 ECE2O60344 883 aa13.38□□□□□ -0.27
CCT2-209ENST00000550455 GPSM2P81274 684 aa13.38□□□□□ -0.27
CCT2-209ENST00000550455 DUSP27Q5VZP5 1158 aa13.38□□□□□ -0.27
CCT2-209ENST00000550455 RGMBQ6NW40 437 aa13.38□□□□□ -0.27
CCT2-209ENST00000550455 USP48Q86UV5 1035 aa13.38□□□□□ -0.27
CCT2-209ENST00000550455 CCDC191Q8NCU4 936 aa13.38□□□□□ -0.27
CCT2-209ENST00000550455 ZNF408Q9H9D4 720 aa13.38□□□□□ -0.27
CCT2-209ENST00000550455 DBNDD1Q9H9R9 158 aa13.38□□□□□ -0.27
CCT2-209ENST00000550455 GBA2Q9HCG7 927 aaPredicted RBP13.38□□□□□ -0.27
CCT2-209ENST00000550455 PCDH10Q9P2E7 1040 aa13.38□□□□□ -0.27
CCT2-209ENST00000550455 ZBTB12Q9Y330 459 aaPredicted RBP13.38□□□□□ -0.27
CCT2-209ENST00000550455 CCDC85CA6NKD9 419 aa13.37□□□□□ -0.27
CCT2-209ENST00000550455 ATP5J2-PTCD1G3V325 749 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms