RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 NMIQ13287 307 aaPredicted RBP14.15□□□□□ -0.14
VDR-208ENST00000550325 TAF7LQ5H9L4 462 aa14.15□□□□□ -0.14
VDR-208ENST00000550325 BOLA2Q9H3K6 86 aa14.15□□□□□ -0.14
VDR-208ENST00000550325 CFAP45Q9UL16 551 aa14.15□□□□□ -0.14
VDR-208ENST00000550325 TAF6LQ9Y6J9 622 aa14.15□□□□□ -0.14
VDR-208ENST00000550325 GSDMDP57764 484 aa14.14□□□□□ -0.15
VDR-208ENST00000550325 XPO4Q9C0E2 1151 aaKnown RBP14.14□□□□□ -0.15
VDR-208ENST00000550325 ZC3H13Q5T200 1668 aaKnown RBP14.14□□□□□ -0.15
VDR-208ENST00000550325 TULP2O00295 520 aa14.14□□□□□ -0.15
VDR-208ENST00000550325 CDC25BP30305 580 aa14.14□□□□□ -0.15
VDR-208ENST00000550325 E4F1Q66K89 784 aaPredicted RBP14.14□□□□□ -0.15
VDR-208ENST00000550325 YEATS2Q9ULM3 1422 aa14.14□□□□□ -0.15
VDR-208ENST00000550325 TTC21AQ8NDW8 1320 aa14.14□□□□□ -0.15
VDR-208ENST00000550325 LMOD1P29536 600 aaPredicted RBP14.14□□□□□ -0.15
VDR-208ENST00000550325 EVCP57679 992 aa14.14□□□□□ -0.15
VDR-208ENST00000550325 TAF7Q15545 349 aaPredicted RBP14.14□□□□□ -0.15
VDR-208ENST00000550325 SLFNL1Q499Z3 407 aa14.14□□□□□ -0.15
VDR-208ENST00000550325 SLC27A2O14975 620 aa14.13□□□□□ -0.15
VDR-208ENST00000550325 HSP90AA4PQ58FG1 418 aa14.13□□□□□ -0.15
VDR-208ENST00000550325 NUDT16Q96DE0 195 aaKnown RBP14.13□□□□□ -0.15
VDR-208ENST00000550325 H2AFXP16104 143 aaPredicted RBP14.13□□□□□ -0.15
VDR-208ENST00000550325 CWC15Q9P013 229 aaKnown RBP14.13□□□□□ -0.15
VDR-208ENST00000550325 LCMT1Q9UIC8 334 aa14.13□□□□□ -0.15
VDR-208ENST00000550325 ZCCHC11Q5TAX3 1644 aaKnown RBP14.13□□□□□ -0.15
VDR-208ENST00000550325 ERBB3P21860 1342 aa14.13□□□□□ -0.15
VDR-208ENST00000550325 CPSF1Q10570 1443 aaKnown RBP14.13□□□□□ -0.15
VDR-208ENST00000550325 PDILTQ8N807 584 aa14.13□□□□□ -0.15
VDR-208ENST00000550325 CCT2P78371 535 aaKnown RBP14.12□□□□□ -0.15
VDR-208ENST00000550325 SMC1AQ14683 1233 aaKnown RBP14.12□□□□□ -0.15
VDR-208ENST00000550325 SSH3Q8TE77 659 aa14.12□□□□□ -0.15
VDR-208ENST00000550325 AK7Q96M32 723 aa14.12□□□□□ -0.15
VDR-208ENST00000550325 ECHDC1Q9NTX5 307 aa14.12□□□□□ -0.15
VDR-208ENST00000550325 A0A1B0GVL5 298 aa14.12□□□□□ -0.15
VDR-208ENST00000550325 CEBPAP49715 358 aaPredicted RBP14.12□□□□□ -0.15
VDR-208ENST00000550325 ANKRD1Q15327 319 aa14.12□□□□□ -0.15
VDR-208ENST00000550325 C9orf78Q9NZ63 289 aaPredicted RBP14.12□□□□□ -0.15
VDR-208ENST00000550325 AOX1Q06278 1338 aa14.12□□□□□ -0.15
VDR-208ENST00000550325 ANKRD65E5RJM6 399 aa14.12□□□□□ -0.15
VDR-208ENST00000550325 GTF2A1P52655 376 aaPredicted RBP14.12□□□□□ -0.15
VDR-208ENST00000550325 UTP14AQ9BVJ6 771 aaKnown RBP14.12□□□□□ -0.15
VDR-208ENST00000550325 GOLPH3LQ9H4A5 285 aa14.12□□□□□ -0.15
VDR-208ENST00000550325 ORC3Q9UBD5 711 aaPredicted RBP14.12□□□□□ -0.15
VDR-208ENST00000550325 MYO1CO00159 1063 aa14.11□□□□□ -0.15
VDR-208ENST00000550325 CAVIN2O95810 425 aa14.11□□□□□ -0.15
VDR-208ENST00000550325 FBXO31Q5XUX0 539 aaPredicted RBP14.11□□□□□ -0.15
VDR-208ENST00000550325 DHX40Q8IX18 779 aaKnown RBP14.11□□□□□ -0.15
VDR-208ENST00000550325 MCM6Q14566 821 aa14.11□□□□□ -0.15
VDR-208ENST00000550325 SERPINC1P01008 464 aa14.1□□□□□ -0.15
VDR-208ENST00000550325 AMPHP49418 695 aa14.1□□□□□ -0.15
VDR-208ENST00000550325 NECTIN1Q15223 517 aa14.1□□□□□ -0.15
VDR-208ENST00000550325 C14orf37Q86TY3 774 aa14.1□□□□□ -0.15
VDR-208ENST00000550325 MAP2P11137 1827 aaKnown RBP14.1□□□□□ -0.15
VDR-208ENST00000550325 ARMCX5Q6P1M9 558 aa14.1□□□□□ -0.15
VDR-208ENST00000550325 SARM1Q6SZW1 724 aa14.1□□□□□ -0.15
VDR-208ENST00000550325 LEKR1Q6ZMV7 388 aa14.1□□□□□ -0.15
VDR-208ENST00000550325 DEPDC5O75140 1603 aa14.1□□□□□ -0.15
VDR-208ENST00000550325 RPS6KB1P23443 525 aa14.1□□□□□ -0.15
VDR-208ENST00000550325 GNG11P61952 73 aa14.1□□□□□ -0.15
VDR-208ENST00000550325 TM6SF1Q9BZW5 370 aa14.1□□□□□ -0.15
VDR-208ENST00000550325 ARHGEF28Q8N1W1 1705 aaKnown RBP14.1□□□□□ -0.15
VDR-208ENST00000550325 CTAGE5O15320 804 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 EPB41L2O43491 1005 aaKnown RBP14.09□□□□□ -0.15
VDR-208ENST00000550325 CFAP100Q494V2 611 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 HSP90AB4PQ58FF6 505 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 Q6ZUG5 572 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 IFT172Q9UG01 1749 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 POGZQ7Z3K3 1410 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 A0A0D9SFI3 127 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 PI4KAP2A4QPH2 592 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 ETF1P62495 437 aaKnown RBP14.09□□□□□ -0.15
VDR-208ENST00000550325 DPCR1Q3MIW9 517 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 GOLGA6L1Q8N7Z2 621 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 PI4KAP1Q8N8J0 262 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 GPATCH11Q8N954 259 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 CCDC150Q8NCX0 1101 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 EDC3Q96F86 508 aaKnown RBP14.09□□□□□ -0.15
VDR-208ENST00000550325 USP28Q96RU2 1077 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 ARFGAP3Q9NP61 516 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 EVI5LQ96CN4 794 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 FAM53CQ9NYF3 392 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 VPS18Q9P253 973 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 NDUFB9Q9Y6M9 179 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 WASLO00401 505 aaPredicted RBP14.09□□□□□ -0.15
VDR-208ENST00000550325 PHACTR2O75167 634 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 CREBRFQ8IUR6 639 aa14.09□□□□□ -0.15
VDR-208ENST00000550325 SLC20A2Q08357 652 aa14.08□□□□□ -0.16
VDR-208ENST00000550325 TOB2Q14106 344 aaPredicted RBP14.08□□□□□ -0.16
VDR-208ENST00000550325 RBM43Q6ZSC3 357 aaKnown RBP14.08□□□□□ -0.16
VDR-208ENST00000550325 RESTQ13127 1097 aa14.08□□□□□ -0.16
VDR-208ENST00000550325 MAP3K19Q56UN5 1328 aa14.08□□□□□ -0.16
VDR-208ENST00000550325 PPLO60437 1756 aa14.07□□□□□ -0.16
VDR-208ENST00000550325 SASH3O75995 380 aa14.07□□□□□ -0.16
VDR-208ENST00000550325 POLR3DP05423 398 aaPredicted RBP14.07□□□□□ -0.16
VDR-208ENST00000550325 IL17RAQ96F46 866 aa14.07□□□□□ -0.16
VDR-208ENST00000550325 SEC62Q99442 399 aaKnown RBP14.07□□□□□ -0.16
VDR-208ENST00000550325 CCDC61Q9Y6R9 512 aa14.07□□□□□ -0.16
VDR-208ENST00000550325 CASQ1P31415 396 aa14.07□□□□□ -0.16
VDR-208ENST00000550325 STK38Q15208 465 aa14.07□□□□□ -0.16
VDR-208ENST00000550325 NBPF11Q86T75 865 aa14.07□□□□□ -0.16
VDR-208ENST00000550325 L2HGDHQ9H9P8 463 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms