RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 QTRT2Q9H974 415 aaKnown RBP9.43□□□□□ -0.9
CCDC38-208ENST00000549876 ZFP64Q9NPA5 681 aa9.43□□□□□ -0.9
CCDC38-208ENST00000549876 C11orf16Q9NQ32 467 aa9.43□□□□□ -0.9
CCDC38-208ENST00000549876 FRRS1LQ9P0K9 344 aa9.43□□□□□ -0.9
CCDC38-208ENST00000549876 MSL1Q68DK7 614 aa9.42□□□□□ -0.9
CCDC38-208ENST00000549876 TRPM4Q8TD43 1214 aa9.42□□□□□ -0.9
CCDC38-208ENST00000549876 ARXQ96QS3 562 aa9.42□□□□□ -0.9
CCDC38-208ENST00000549876 CPB1P15086 417 aa9.41□□□□□ -0.9
CCDC38-208ENST00000549876 WEE1P30291 646 aa9.41□□□□□ -0.9
CCDC38-208ENST00000549876 PERM1Q5SV97 790 aa9.41□□□□□ -0.9
CCDC38-208ENST00000549876 DHX32Q7L7V1 743 aaKnown RBP9.41□□□□□ -0.9
CCDC38-208ENST00000549876 DTWD1Q8N5C7 304 aa9.41□□□□□ -0.9
CCDC38-208ENST00000549876 IFT43Q96FT9 208 aa9.41□□□□□ -0.9
CCDC38-208ENST00000549876 TARSP26639 723 aaKnown RBP9.4□□□□□ -0.9
CCDC38-208ENST00000549876 ARSDP51689 593 aa9.4□□□□□ -0.9
CCDC38-208ENST00000549876 PLAURQ03405 335 aa9.4□□□□□ -0.9
CCDC38-208ENST00000549876 DGKZQ13574 1117 aa9.4□□□□□ -0.9
CCDC38-208ENST00000549876 FBXO11Q86XK2 927 aa9.4□□□□□ -0.9
CCDC38-208ENST00000549876 TTC9Q92623 222 aa9.4□□□□□ -0.9
CCDC38-208ENST00000549876 TP53INP1Q96A56 240 aa9.4□□□□□ -0.9
CCDC38-208ENST00000549876 USP21Q9UK80 565 aa9.4□□□□□ -0.9
CCDC38-208ENST00000549876 MICAL2O94851 1124 aa9.39□□□□□ -0.91
CCDC38-208ENST00000549876 KRT25Q7Z3Z0 450 aa9.39□□□□□ -0.91
CCDC38-208ENST00000549876 MYO19Q96H55 970 aa9.39□□□□□ -0.91
CCDC38-208ENST00000549876 CALR3Q96L12 384 aaKnown RBP9.39□□□□□ -0.91
CCDC38-208ENST00000549876 VRTNQ9H8Y1 702 aa9.39□□□□□ -0.91
CCDC38-208ENST00000549876 KRTAP9-6A0A140TA67 174 aa9.38□□□□□ -0.91
CCDC38-208ENST00000549876 FOXO3O43524 673 aa9.38□□□□□ -0.91
CCDC38-208ENST00000549876 GPLD1P80108 840 aa9.38□□□□□ -0.91
CCDC38-208ENST00000549876 SASH3O75995 380 aa9.37□□□□□ -0.91
CCDC38-208ENST00000549876 LMOD1P29536 600 aaPredicted RBP9.37□□□□□ -0.91
CCDC38-208ENST00000549876 C11orf91Q3C1V1 193 aa9.37□□□□□ -0.91
CCDC38-208ENST00000549876 A6NJR5 290 aa9.36□□□□□ -0.91
CCDC38-208ENST00000549876 OPLAHO14841 1288 aa9.36□□□□□ -0.91
CCDC38-208ENST00000549876 RARAP10276 462 aa9.36□□□□□ -0.91
CCDC38-208ENST00000549876 LRP8Q14114 963 aa9.36□□□□□ -0.91
CCDC38-208ENST00000549876 ELMSAN1Q6PJG2 1045 aa9.36□□□□□ -0.91
CCDC38-208ENST00000549876 WFDC12Q8WWY7 111 aa9.36□□□□□ -0.91
CCDC38-208ENST00000549876 EGFRP00533 1210 aa9.35□□□□□ -0.91
CCDC38-208ENST00000549876 NOS3P29474 1203 aa9.35□□□□□ -0.91
CCDC38-208ENST00000549876 MLLT1Q03111 559 aaPredicted RBP9.35□□□□□ -0.91
CCDC38-208ENST00000549876 WFDC8Q8IUA0 241 aa9.35□□□□□ -0.91
CCDC38-208ENST00000549876 LRFN2Q9ULH4 789 aa9.35□□□□□ -0.91
CCDC38-208ENST00000549876 DEAF1O75398 565 aaPredicted RBP9.34□□□□□ -0.91
CCDC38-208ENST00000549876 IREB2P48200 963 aaKnown RBP9.34□□□□□ -0.91
CCDC38-208ENST00000549876 NRLP54845 237 aa9.34□□□□□ -0.91
CCDC38-208ENST00000549876 IGF2-ASQ6U949 168 aa9.34□□□□□ -0.91
CCDC38-208ENST00000549876 SMG9Q9H0W8 520 aaKnown RBP9.33□□□□□ -0.92
CCDC38-208ENST00000549876 TLR7Q9NYK1 1049 aaKnown RBP9.33□□□□□ -0.92
CCDC38-208ENST00000549876 RTCBQ9Y3I0 505 aaKnown RBP9.33□□□□□ -0.92
CCDC38-208ENST00000549876 HYAL3O43820 417 aaPredicted RBP9.32□□□□□ -0.92
CCDC38-208ENST00000549876 CFAP70Q5T0N1 1121 aa9.32□□□□□ -0.92
CCDC38-208ENST00000549876 HFE2Q6ZVN8 426 aa9.32□□□□□ -0.92
CCDC38-208ENST00000549876 USP20Q9Y2K6 914 aa9.32□□□□□ -0.92
CCDC38-208ENST00000549876 DLL1O00548 723 aa9.31□□□□□ -0.92
CCDC38-208ENST00000549876 NBPF11Q86T75 865 aa9.31□□□□□ -0.92
CCDC38-208ENST00000549876 VTI1AQ96AJ9 217 aa9.31□□□□□ -0.92
CCDC38-208ENST00000549876 MEGF10Q96KG7 1140 aa9.31□□□□□ -0.92
CCDC38-208ENST00000549876 ARID4AP29374 1257 aaPredicted RBP9.3□□□□□ -0.92
CCDC38-208ENST00000549876 KCNMB2Q9Y691 235 aa9.3□□□□□ -0.92
CCDC38-208ENST00000549876 XYLBO75191 536 aa9.29□□□□□ -0.92
CCDC38-208ENST00000549876 HOXD8P13378 290 aaPredicted RBP9.29□□□□□ -0.92
CCDC38-208ENST00000549876 TREML1Q86YW5 311 aa9.29□□□□□ -0.92
CCDC38-208ENST00000549876 FAM200AQ8TCP9 573 aa9.29□□□□□ -0.92
CCDC38-208ENST00000549876 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.29□□□□□ -0.92
CCDC38-208ENST00000549876 LOC102724428A0A0B4J2F2 783 aa9.28□□□□□ -0.92
CCDC38-208ENST00000549876 EIF2AK2P19525 551 aaKnown RBP9.28□□□□□ -0.92
CCDC38-208ENST00000549876 SIK1P57059 783 aa9.28□□□□□ -0.92
CCDC38-208ENST00000549876 COX20Q5RI15 118 aa9.28□□□□□ -0.92
CCDC38-208ENST00000549876 RGL4Q8IZJ4 473 aa9.28□□□□□ -0.92
CCDC38-208ENST00000549876 CMTR1Q8N1G2 835 aaKnown RBP9.28□□□□□ -0.92
CCDC38-208ENST00000549876 PLD4Q96BZ4 506 aa9.28□□□□□ -0.92
CCDC38-208ENST00000549876 J3QW42 95 aa9.27□□□□□ -0.93
CCDC38-208ENST00000549876 FKBP5Q13451 457 aaPredicted RBP9.27□□□□□ -0.93
CCDC38-208ENST00000549876 PRR23CQ6ZRP0 262 aa9.27□□□□□ -0.93
CCDC38-208ENST00000549876 DZIP1LQ8IYY4 767 aaKnown RBP9.27□□□□□ -0.93
CCDC38-208ENST00000549876 RNF112Q9ULX5 631 aa9.27□□□□□ -0.93
CCDC38-208ENST00000549876 MMP20O60882 483 aa9.26□□□□□ -0.93
CCDC38-208ENST00000549876 SOX18P35713 384 aa9.26□□□□□ -0.93
CCDC38-208ENST00000549876 PSAPP07602 524 aa9.25□□□□□ -0.93
CCDC38-208ENST00000549876 TMEM130Q8N3G9 435 aa9.25□□□□□ -0.93
CCDC38-208ENST00000549876 CDCA8Q53HL2 280 aa9.24□□□□□ -0.93
CCDC38-208ENST00000549876 AKTIPQ9H8T0 292 aa9.24□□□□□ -0.93
CCDC38-208ENST00000549876 F8W735 103 aaPredicted RBP9.23□□□□□ -0.93
CCDC38-208ENST00000549876 ETFBKMTQ8IXQ9 262 aa9.23□□□□□ -0.93
CCDC38-208ENST00000549876 IL22RA1Q8N6P7 574 aa9.23□□□□□ -0.93
CCDC38-208ENST00000549876 NSUN5Q96P11 429 aaKnown RBP9.23□□□□□ -0.93
CCDC38-208ENST00000549876 KRTAP4-12Q9BQ66 201 aa9.23□□□□□ -0.93
CCDC38-208ENST00000549876 MRPL18Q9H0U6 180 aaKnown RBP9.23□□□□□ -0.93
CCDC38-208ENST00000549876 SRA1Q9HD15 236 aaKnown RBP9.23□□□□□ -0.93
CCDC38-208ENST00000549876 NOVA2Q9UNW9 492 aaKnown RBP9.23□□□□□ -0.93
CCDC38-208ENST00000549876 ALX3O95076 343 aa9.22□□□□□ -0.93
CCDC38-208ENST00000549876 GHRHP01286 108 aa9.22□□□□□ -0.93
CCDC38-208ENST00000549876 SETDB1Q15047 1291 aa9.22□□□□□ -0.93
CCDC38-208ENST00000549876 TRIP4Q15650 581 aaPredicted RBP9.22□□□□□ -0.93
CCDC38-208ENST00000549876 OCLNQ16625 522 aa9.22□□□□□ -0.93
CCDC38-208ENST00000549876 SWI5Q1ZZU3 235 aa9.22□□□□□ -0.93
CCDC38-208ENST00000549876 GDF6Q6KF10 455 aaPredicted RBP9.22□□□□□ -0.93
CCDC38-208ENST00000549876 Q6ZS46 218 aa9.22□□□□□ -0.93
CCDC38-208ENST00000549876 PRIMPOLQ96LW4 560 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms