RNA–Protein interactions for RNA: ENST00000549842.1

CPNE8-206, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-206ENST00000549842 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.95□□□□□ -1.3
CPNE8-206ENST00000549842 KCNMB2Q9Y691 235 aa6.95□□□□□ -1.3
CPNE8-206ENST00000549842 UNCXA6NJT0 531 aa6.94□□□□□ -1.3
CPNE8-206ENST00000549842 RNF225M0QZC1 329 aaPredicted RBP6.94□□□□□ -1.3
CPNE8-206ENST00000549842 ZBTB39O15060 712 aa6.94□□□□□ -1.3
CPNE8-206ENST00000549842 RPLP1P05386 114 aaKnown RBP6.94□□□□□ -1.3
CPNE8-206ENST00000549842 HOXB4P17483 251 aaPredicted RBP6.94□□□□□ -1.3
CPNE8-206ENST00000549842 ZAP70P43403 619 aa6.94□□□□□ -1.3
CPNE8-206ENST00000549842 FKBP4Q02790 459 aaKnown RBP eCLIP6.94□□□□□ -1.3
CPNE8-206ENST00000549842 PCSK7Q16549 785 aa6.94□□□□□ -1.3
CPNE8-206ENST00000549842 ALKBH2Q6NS38 261 aa6.94□□□□□ -1.3
CPNE8-206ENST00000549842 KANK3Q6NY19 840 aa6.94□□□□□ -1.3
CPNE8-206ENST00000549842 BHMTQ93088 406 aa6.94□□□□□ -1.3
CPNE8-206ENST00000549842 PHF20L1A8MW92 1017 aa6.93□□□□□ -1.3
CPNE8-206ENST00000549842 XYLBO75191 536 aa6.93□□□□□ -1.3
CPNE8-206ENST00000549842 HOXD8P13378 290 aaPredicted RBP6.93□□□□□ -1.3
CPNE8-206ENST00000549842 SCNN1AP37088 669 aa6.93□□□□□ -1.3
CPNE8-206ENST00000549842 NOM1Q5C9Z4 860 aaKnown RBP6.93□□□□□ -1.3
CPNE8-206ENST00000549842 CHSY3Q70JA7 882 aa6.93□□□□□ -1.3
CPNE8-206ENST00000549842 PNMA5Q96PV4 448 aa6.93□□□□□ -1.3
CPNE8-206ENST00000549842 PRDM6Q9NQX0 595 aa6.93□□□□□ -1.3
CPNE8-206ENST00000549842 FNDC3AQ9Y2H6 1198 aaKnown RBP6.93□□□□□ -1.3
CPNE8-206ENST00000549842 PIK3R2O00459 728 aa6.92□□□□□ -1.3
CPNE8-206ENST00000549842 FAM13AO94988 1023 aa6.92□□□□□ -1.3
CPNE8-206ENST00000549842 LINC00114Q6XXX2 140 aa6.92□□□□□ -1.3
CPNE8-206ENST00000549842 RGL4Q8IZJ4 473 aa6.92□□□□□ -1.3
CPNE8-206ENST00000549842 CMTR1Q8N1G2 835 aaKnown RBP6.92□□□□□ -1.3
CPNE8-206ENST00000549842 NFKB1P19838 968 aa6.91□□□□□ -1.3
CPNE8-206ENST00000549842 ADH7P40394 386 aa6.91□□□□□ -1.3
CPNE8-206ENST00000549842 DGKGP49619 791 aa6.91□□□□□ -1.3
CPNE8-206ENST00000549842 XKR5Q6UX68 686 aa6.91□□□□□ -1.3
CPNE8-206ENST00000549842 PODNQ7Z5L7 613 aa6.91□□□□□ -1.3
CPNE8-206ENST00000549842 NLRP13Q86W25 1043 aa6.91□□□□□ -1.3
CPNE8-206ENST00000549842 TRPM4Q8TD43 1214 aa6.91□□□□□ -1.3
CPNE8-206ENST00000549842 BCL2L13Q9BXK5 485 aa6.91□□□□□ -1.3
CPNE8-206ENST00000549842 TLR7Q9NYK1 1049 aaKnown RBP6.91□□□□□ -1.3
CPNE8-206ENST00000549842 ZFATQ9P243 1243 aa6.91□□□□□ -1.3
CPNE8-206ENST00000549842 MKL2Q9ULH7 1088 aa6.91□□□□□ -1.3
CPNE8-206ENST00000549842 ICMTO60725 284 aa6.9□□□□□ -1.3
CPNE8-206ENST00000549842 SASH3O75995 380 aa6.9□□□□□ -1.3
CPNE8-206ENST00000549842 ABL1P00519 1130 aa6.9□□□□□ -1.3
CPNE8-206ENST00000549842 ZNF16P17020 682 aaPredicted RBP6.9□□□□□ -1.3
CPNE8-206ENST00000549842 MPSTP25325 297 aa6.9□□□□□ -1.3
CPNE8-206ENST00000549842 TARSP26639 723 aaKnown RBP6.9□□□□□ -1.3
CPNE8-206ENST00000549842 MZF1P28698 734 aaPredicted RBP6.9□□□□□ -1.3
CPNE8-206ENST00000549842 SOX18P35713 384 aa6.9□□□□□ -1.3
CPNE8-206ENST00000549842 EIF1AXP47813 144 aaKnown RBP6.9□□□□□ -1.3
CPNE8-206ENST00000549842 GSK3AP49840 483 aa6.9□□□□□ -1.3
CPNE8-206ENST00000549842 NRLP54845 237 aa6.9□□□□□ -1.3
CPNE8-206ENST00000549842 C20orf204Q6ZNR8 217 aa6.9□□□□□ -1.3
CPNE8-206ENST00000549842 RAB44Q7Z6P3 723 aaPredicted RBP6.9□□□□□ -1.3
CPNE8-206ENST00000549842 ALYREFQ86V81 257 aaKnown RBP6.9□□□□□ -1.3
CPNE8-206ENST00000549842 STARD13Q9Y3M8 1113 aa6.9□□□□□ -1.3
CPNE8-206ENST00000549842 ANKRD33BA6NCL7 494 aa6.89□□□□□ -1.31
CPNE8-206ENST00000549842 UBAP1LF5GYI3 381 aa6.89□□□□□ -1.31
CPNE8-206ENST00000549842 IGSF3O75054 1194 aa6.89□□□□□ -1.31
CPNE8-206ENST00000549842 RARAP10276 462 aa6.89□□□□□ -1.31
CPNE8-206ENST00000549842 PCSK2P16519 638 aa6.89□□□□□ -1.31
CPNE8-206ENST00000549842 AMPD1P23109 780 aa6.89□□□□□ -1.31
CPNE8-206ENST00000549842 SNRPNP63162 240 aaKnown RBP6.89□□□□□ -1.31
CPNE8-206ENST00000549842 GPLD1P80108 840 aa6.89□□□□□ -1.31
CPNE8-206ENST00000549842 TRIP4Q15650 581 aaPredicted RBP6.89□□□□□ -1.31
CPNE8-206ENST00000549842 ZNF326Q5BKZ1 582 aaKnown RBP6.89□□□□□ -1.31
CPNE8-206ENST00000549842 PDE12Q6L8Q7 609 aaKnown RBP6.89□□□□□ -1.31
CPNE8-206ENST00000549842 DHX32Q7L7V1 743 aaKnown RBP6.89□□□□□ -1.31
CPNE8-206ENST00000549842 GPR152Q8TDT2 470 aa6.89□□□□□ -1.31
CPNE8-206ENST00000549842 MRRFQ96E11 262 aaKnown RBP6.89□□□□□ -1.31
CPNE8-206ENST00000549842 DNAJB12Q9NXW2 375 aaKnown RBP6.89□□□□□ -1.31
CPNE8-206ENST00000549842 USP20Q9Y2K6 914 aa6.89□□□□□ -1.31
CPNE8-206ENST00000549842 CNTNAP5Q8WYK1 1306 aa6.89□□□□□ -1.31
CPNE8-206ENST00000549842 USP5P45974 858 aa6.88□□□□□ -1.31
CPNE8-206ENST00000549842 GLYCTKQ8IVS8 523 aa6.88□□□□□ -1.31
CPNE8-206ENST00000549842 TTC9Q92623 222 aa6.88□□□□□ -1.31
CPNE8-206ENST00000549842 UBE2OQ9C0C9 1292 aaKnown RBP6.88□□□□□ -1.31
CPNE8-206ENST00000549842 IGSF5Q9NSI5 407 aa6.88□□□□□ -1.31
CPNE8-206ENST00000549842 FRRS1LQ9P0K9 344 aa6.88□□□□□ -1.31
CPNE8-206ENST00000549842 SLC6A14Q9UN76 642 aa6.88□□□□□ -1.31
CPNE8-206ENST00000549842 SHROOM4Q9ULL8 1493 aa6.87□□□□□ -1.31
CPNE8-206ENST00000549842 ZBTB42B2RXF5 422 aa6.87□□□□□ -1.31
CPNE8-206ENST00000549842 H3BRB1 525 aa6.87□□□□□ -1.31
CPNE8-206ENST00000549842 GNB5O14775 395 aa6.87□□□□□ -1.31
CPNE8-206ENST00000549842 PLAURQ03405 335 aa6.87□□□□□ -1.31
CPNE8-206ENST00000549842 ECM1Q16610 540 aa6.87□□□□□ -1.31
CPNE8-206ENST00000549842 NPAS4Q8IUM7 802 aa6.87□□□□□ -1.31
CPNE8-206ENST00000549842 MICALL1Q8N3F8 863 aa6.87□□□□□ -1.31
CPNE8-206ENST00000549842 GIPC2Q8TF65 315 aa6.87□□□□□ -1.31
CPNE8-206ENST00000549842 TUT1Q9H6E5 874 aaKnown RBP6.87□□□□□ -1.31
CPNE8-206ENST00000549842 RRAGCQ9HB90 399 aa6.87□□□□□ -1.31
CPNE8-206ENST00000549842 KIAA1522Q9P206 1035 aaPredicted RBP6.87□□□□□ -1.31
CPNE8-206ENST00000549842 MMP20O60882 483 aa6.86□□□□□ -1.31
CPNE8-206ENST00000549842 PDGFAP04085 211 aa6.86□□□□□ -1.31
CPNE8-206ENST00000549842 PSAPP07602 524 aa6.86□□□□□ -1.31
CPNE8-206ENST00000549842 RASSF7Q02833 373 aa6.86□□□□□ -1.31
CPNE8-206ENST00000549842 EHHADHQ08426 723 aa6.86□□□□□ -1.31
CPNE8-206ENST00000549842 MTMR3Q13615 1198 aa6.86□□□□□ -1.31
CPNE8-206ENST00000549842 ATCAYQ86WG3 371 aa6.86□□□□□ -1.31
CPNE8-206ENST00000549842 ZSCAN29Q8IWY8 852 aaPredicted RBP6.86□□□□□ -1.31
CPNE8-206ENST00000549842 OR13H1Q8NG92 308 aa6.86□□□□□ -1.31
CPNE8-206ENST00000549842 EDEM1Q92611 657 aa6.86□□□□□ -1.31
CPNE8-206ENST00000549842 NUDT16Q96DE0 195 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms