RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 CHPF2Q9P2E5 772 aa17.81■□□□□ 0.44
CNOT2-220ENST00000549750 DBF4Q9UBU7 674 aaPredicted RBP17.81■□□□□ 0.44
CNOT2-220ENST00000549750 TRAF5O00463 557 aa17.8■□□□□ 0.44
CNOT2-220ENST00000549750 PPEF1O14829 653 aaPredicted RBP17.8■□□□□ 0.44
CNOT2-220ENST00000549750 EPS15P42566 896 aa17.8■□□□□ 0.44
CNOT2-220ENST00000549750 DGKZQ13574 1117 aa17.8■□□□□ 0.44
CNOT2-220ENST00000549750 HDGFL1Q5TGJ6 251 aa17.8■□□□□ 0.44
CNOT2-220ENST00000549750 USP50Q70EL3 339 aaPredicted RBP17.8■□□□□ 0.44
CNOT2-220ENST00000549750 LAS1LQ9Y4W2 734 aaKnown RBP17.8■□□□□ 0.44
CNOT2-220ENST00000549750 CASP8AP2Q9UKL3 1982 aa17.79■□□□□ 0.44
CNOT2-220ENST00000549750 CALD1Q05682 793 aaKnown RBP17.79■□□□□ 0.44
CNOT2-220ENST00000549750 PLBD2Q8NHP8 589 aa17.79■□□□□ 0.44
CNOT2-220ENST00000549750 NECTIN2Q92692 538 aa17.79■□□□□ 0.44
CNOT2-220ENST00000549750 MBIPQ9NS73 344 aa17.79■□□□□ 0.44
CNOT2-220ENST00000549750 IFT57Q9NWB7 429 aa17.79■□□□□ 0.44
CNOT2-220ENST00000549750 COL4A5P29400 1685 aa17.79■□□□□ 0.44
CNOT2-220ENST00000549750 SH3TC1Q8TE82 1336 aa17.78■□□□□ 0.44
CNOT2-220ENST00000549750 APAF1O14727 1248 aa17.78■□□□□ 0.44
CNOT2-220ENST00000549750 SCNN1DP51172 638 aa17.78■□□□□ 0.44
CNOT2-220ENST00000549750 BRPF1P55201 1214 aaPredicted RBP17.78■□□□□ 0.44
CNOT2-220ENST00000549750 AIMP1Q12904 312 aaKnown RBP17.78■□□□□ 0.44
CNOT2-220ENST00000549750 SAPCD2Q86UD0 394 aa17.78■□□□□ 0.44
CNOT2-220ENST00000549750 VPS33BQ9H267 617 aa17.78■□□□□ 0.44
CNOT2-220ENST00000549750 HYPKQ9NX55 129 aa17.78■□□□□ 0.44
CNOT2-220ENST00000549750 ATP6V0A2Q9Y487 856 aa17.78■□□□□ 0.44
CNOT2-220ENST00000549750 ABCC4O15439 1325 aa17.77■□□□□ 0.44
CNOT2-220ENST00000549750 DUSP27Q5VZP5 1158 aa17.77■□□□□ 0.44
CNOT2-220ENST00000549750 ANKRD13DQ6ZTN6 518 aa17.77■□□□□ 0.44
CNOT2-220ENST00000549750 ISCA1Q9BUE6 129 aa17.77■□□□□ 0.44
CNOT2-220ENST00000549750 DDX60Q8IY21 1712 aaKnown RBP17.77■□□□□ 0.44
CNOT2-220ENST00000549750 BBOX1O75936 387 aa17.76■□□□□ 0.43
CNOT2-220ENST00000549750 GNAI1P63096 354 aa17.76■□□□□ 0.43
CNOT2-220ENST00000549750 HHIPL1Q96JK4 782 aa17.76■□□□□ 0.43
CNOT2-220ENST00000549750 RTFDC1Q9BY42 306 aaPredicted RBP17.76■□□□□ 0.43
CNOT2-220ENST00000549750 TRMT112Q9UI30 125 aaKnown RBP17.76■□□□□ 0.43
CNOT2-220ENST00000549750 TRPM7Q96QT4 1865 aa17.75■□□□□ 0.43
CNOT2-220ENST00000549750 LRRC37AA6NMS7 1700 aa17.75■□□□□ 0.43
CNOT2-220ENST00000549750 CELF2O95319 508 aaKnown RBP17.75■□□□□ 0.43
CNOT2-220ENST00000549750 TRIM28Q13263 835 aaKnown RBP17.75■□□□□ 0.43
CNOT2-220ENST00000549750 LTBP1Q14766 1721 aa17.75■□□□□ 0.43
CNOT2-220ENST00000549750 CIAPIN1Q6FI81 312 aa17.74■□□□□ 0.43
CNOT2-220ENST00000549750 SP8Q8IXZ3 490 aa17.74■□□□□ 0.43
CNOT2-220ENST00000549750 LARGE2Q8N3Y3 721 aa17.74■□□□□ 0.43
CNOT2-220ENST00000549750 TMX4Q9H1E5 349 aaPredicted RBP17.74■□□□□ 0.43
CNOT2-220ENST00000549750 HCLS1P14317 486 aaPredicted RBP17.73■□□□□ 0.43
CNOT2-220ENST00000549750 TMC4Q7Z404 712 aa17.73■□□□□ 0.43
CNOT2-220ENST00000549750 SUPT20HQ8NEM7 779 aa17.73■□□□□ 0.43
CNOT2-220ENST00000549750 ZEB1P37275 1124 aaPredicted RBP17.72■□□□□ 0.43
CNOT2-220ENST00000549750 GRAPQ13588 217 aa17.72■□□□□ 0.43
CNOT2-220ENST00000549750 NCBP3Q53F19 620 aaKnown RBP17.72■□□□□ 0.43
CNOT2-220ENST00000549750 SLC51AQ86UW1 340 aa17.72■□□□□ 0.43
CNOT2-220ENST00000549750 GRAPLQ8TC17 118 aaPredicted RBP17.72■□□□□ 0.43
CNOT2-220ENST00000549750 CHMP4AQ9BY43 222 aa17.72■□□□□ 0.43
CNOT2-220ENST00000549750 ADARB2Q9NS39 739 aaKnown RBP17.72■□□□□ 0.43
CNOT2-220ENST00000549750 SF3B3Q15393 1217 aaKnown RBP17.71■□□□□ 0.43
CNOT2-220ENST00000549750 CCDC27Q2M243 656 aa17.71■□□□□ 0.43
CNOT2-220ENST00000549750 DDX46Q7L014 1031 aaKnown RBP17.71■□□□□ 0.43
CNOT2-220ENST00000549750 NIM1KQ8IY84 436 aa17.71■□□□□ 0.43
CNOT2-220ENST00000549750 GPRC5DQ9NZD1 345 aa17.71■□□□□ 0.43
CNOT2-220ENST00000549750 DUOX1Q9NRD9 1551 aa17.7■□□□□ 0.42
CNOT2-220ENST00000549750 TAF1P21675 1872 aa17.7■□□□□ 0.42
CNOT2-220ENST00000549750 TCERG1O14776 1098 aaKnown RBP17.7■□□□□ 0.42
CNOT2-220ENST00000549750 PPIP5K2O43314 1243 aa17.7■□□□□ 0.42
CNOT2-220ENST00000549750 NOGQ13253 232 aa17.7■□□□□ 0.42
CNOT2-220ENST00000549750 GLIS2Q9BZE0 524 aaPredicted RBP17.7■□□□□ 0.42
CNOT2-220ENST00000549750 SOX10P56693 466 aa17.69■□□□□ 0.42
CNOT2-220ENST00000549750 PRPF38BQ5VTL8 546 aaKnown RBP17.69■□□□□ 0.42
CNOT2-220ENST00000549750 MPNDQ8N594 471 aa17.69■□□□□ 0.42
CNOT2-220ENST00000549750 ATP5J2-PTCD1G3V325 749 aa17.68■□□□□ 0.42
CNOT2-220ENST00000549750 GOLGA2Q08379 1002 aa17.68■□□□□ 0.42
CNOT2-220ENST00000549750 KIAA2012Q0VF49 1180 aa17.68■□□□□ 0.42
CNOT2-220ENST00000549750 AOC3Q16853 763 aa17.68■□□□□ 0.42
CNOT2-220ENST00000549750 CCDC184Q52MB2 194 aa17.68■□□□□ 0.42
CNOT2-220ENST00000549750 DPP8Q6V1X1 898 aaPredicted RBP17.68■□□□□ 0.42
CNOT2-220ENST00000549750 C8orf58Q8NAV2 365 aa17.68■□□□□ 0.42
CNOT2-220ENST00000549750 FAM89AQ96GI7 184 aa17.68■□□□□ 0.42
CNOT2-220ENST00000549750 ZNF408Q9H9D4 720 aa17.68■□□□□ 0.42
CNOT2-220ENST00000549750 PGAP2Q9UHJ9 254 aa17.68■□□□□ 0.42
CNOT2-220ENST00000549750 ZNRF3Q9ULT6 936 aa17.68■□□□□ 0.42
CNOT2-220ENST00000549750 PHAXQ9H814 394 aaKnown RBP17.67■□□□□ 0.42
CNOT2-220ENST00000549750 CDHR2Q9BYE9 1310 aa17.67■□□□□ 0.42
CNOT2-220ENST00000549750 CCDC30Q5VVM6 783 aa17.66■□□□□ 0.42
CNOT2-220ENST00000549750 RIC3Q7Z5B4 369 aa17.66■□□□□ 0.42
CNOT2-220ENST00000549750 ZBTB38Q8NAP3 1195 aaPredicted RBP17.66■□□□□ 0.42
CNOT2-220ENST00000549750 ZC3H15Q8WU90 426 aaKnown RBP17.66■□□□□ 0.42
CNOT2-220ENST00000549750 ZIC5Q96T25 663 aa17.66■□□□□ 0.42
CNOT2-220ENST00000549750 ELL2O00472 640 aaPredicted RBP17.65■□□□□ 0.42
CNOT2-220ENST00000549750 IRS4O14654 1257 aaPredicted RBP17.65■□□□□ 0.42
CNOT2-220ENST00000549750 HSP90B1P14625 803 aaKnown RBP17.65■□□□□ 0.42
CNOT2-220ENST00000549750 CXCL9Q07325 125 aa17.65■□□□□ 0.42
CNOT2-220ENST00000549750 CDC37L1Q7L3B6 337 aa17.65■□□□□ 0.42
CNOT2-220ENST00000549750 CCDC191Q8NCU4 936 aa17.65■□□□□ 0.42
CNOT2-220ENST00000549750 IL16Q14005 1332 aa17.65■□□□□ 0.42
CNOT2-220ENST00000549750 COL4A1P02462 1669 aa17.64■□□□□ 0.42
CNOT2-220ENST00000549750 GMPSP49915 693 aaPredicted RBP17.64■□□□□ 0.41
CNOT2-220ENST00000549750 HUNKP57058 714 aa17.64■□□□□ 0.41
CNOT2-220ENST00000549750 WWC1Q8IX03 1113 aa17.64■□□□□ 0.41
CNOT2-220ENST00000549750 CELF1Q92879 486 aaKnown RBP17.64■□□□□ 0.41
CNOT2-220ENST00000549750 SAGE1Q9NXZ1 904 aa17.64■□□□□ 0.41
CNOT2-220ENST00000549750 DDX58O95786 925 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms