RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 NBPF7P0C2Y1 421 aaPredicted RBP10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 NT5C2P49902 561 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 CCDC184Q52MB2 194 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 ZNF772Q68DY9 489 aaPredicted RBP10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 ZNF622Q969S3 477 aaKnown RBP eCLIP10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 NEK1Q96PY6 1258 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 HELLSQ9NRZ9 838 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 CDC42BPGQ6DT37 1551 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 MINDY4BA8MYZ0 360 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 VAMP4O75379 141 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 NAP1L1P55209 391 aaKnown RBP10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 NFKBIBQ15653 356 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 ZNF790Q6PG37 636 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 FAM114A1Q8IWE2 563 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 ANO10Q9NW15 660 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 NCAPD2Q15021 1401 aa10.74□□□□□ -0.69
PPFIA2-216ENST00000549396 CCDC87Q9NVE4 849 aa10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 MAP3K4Q9Y6R4 1608 aa10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 FIBPO43427 364 aa10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 PDE8AO60658 829 aa10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 CETN2P41208 172 aa10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 JDP2Q8WYK2 163 aa10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 MTMR7Q9Y216 660 aa10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 SH3TC1Q8TE82 1336 aa10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 PPP2R5BQ15173 497 aa10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 CHL1O00533 1208 aa10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 IRS4O14654 1257 aaPredicted RBP10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 RANBP6O60518 1105 aaKnown RBP10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 PRPF40AO75400 957 aaKnown RBP10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 BAG6P46379 1132 aa10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 FOSBP53539 338 aa10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 FOXD4L6Q3SYB3 417 aaPredicted RBP10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 ATL3Q6DD88 541 aa10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 NAA16Q6N069 864 aaPredicted RBP10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 TMED8Q6PL24 325 aaPredicted RBP10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 FOXD4L3Q6VB84 417 aaPredicted RBP10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 TICAM2Q86XR7 235 aa10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 CCDC150Q8NCX0 1101 aa10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 CCDC8Q9H0W5 538 aaPredicted RBP10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 PRM3Q9NNZ6 103 aa10.73□□□□□ -0.69
PPFIA2-216ENST00000549396 CALML3P27482 149 aa10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 IARSP41252 1262 aaKnown RBP10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 CALML4Q96GE6 196 aa10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 CARD14Q9BXL6 1004 aa10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 ZC3H12CQ9C0D7 883 aaKnown RBP10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 DCTPP1Q9H773 170 aa10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 MAP3K11Q16584 847 aa10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 USP37Q86T82 979 aa10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 RBM28Q9NW13 759 aaKnown RBP10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 RMND1Q9NWS8 449 aa10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 TSPY2A6NKD2 308 aa10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 GOLIM4O00461 696 aa10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 SERPINC1P01008 464 aa10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 TMEM67Q5HYA8 995 aa10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 TTC6Q86TZ1 520 aa10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 TCP11L1Q9NUJ3 509 aa10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 MROH5Q6ZUA9 1318 aa10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 HSPA2P54652 639 aa10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 TFCP2L1Q9NZI6 479 aa10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 CCNL1Q9UK58 526 aaPredicted RBP10.72□□□□□ -0.69
PPFIA2-216ENST00000549396 MAP4K4O95819 1239 aaPredicted RBP10.71□□□□□ -0.69
PPFIA2-216ENST00000549396 CETN1Q12798 172 aa10.71□□□□□ -0.69
PPFIA2-216ENST00000549396 VPS36Q86VN1 386 aa10.71□□□□□ -0.69
PPFIA2-216ENST00000549396 FEZ1Q99689 392 aa10.71□□□□□ -0.69
PPFIA2-216ENST00000549396 SETBP1Q9Y6X0 1596 aa10.71□□□□□ -0.69
PPFIA2-216ENST00000549396 NLRP5P59047 1200 aa10.71□□□□□ -0.69
PPFIA2-216ENST00000549396 CNBD1Q8NA66 436 aa10.71□□□□□ -0.69
PPFIA2-216ENST00000549396 TBC1D22AQ8WUA7 517 aa10.71□□□□□ -0.69
PPFIA2-216ENST00000549396 TRPC5Q9UL62 973 aaPredicted RBP10.71□□□□□ -0.69
PPFIA2-216ENST00000549396 TMEM94Q12767 1356 aa10.71□□□□□ -0.69
PPFIA2-216ENST00000549396 RNF113AO15541 343 aaKnown RBP10.71□□□□□ -0.69
PPFIA2-216ENST00000549396 ALDH1B1P30837 517 aa10.71□□□□□ -0.69
PPFIA2-216ENST00000549396 STK3Q13188 491 aa10.71□□□□□ -0.69
PPFIA2-216ENST00000549396 FKBP15Q5T1M5 1219 aa10.71□□□□□ -0.69
PPFIA2-216ENST00000549396 LMBR1LQ6UX01 489 aa10.71□□□□□ -0.69
PPFIA2-216ENST00000549396 NFATC2IPQ8NCF5 419 aa10.71□□□□□ -0.69
PPFIA2-216ENST00000549396 NEMFO60524 1076 aa10.71□□□□□ -0.7
PPFIA2-216ENST00000549396 ATP2B1P20020 1258 aa10.71□□□□□ -0.7
PPFIA2-216ENST00000549396 CDK12Q9NYV4 1490 aaPredicted RBP10.71□□□□□ -0.7
PPFIA2-216ENST00000549396 WTAPQ15007 396 aa10.71□□□□□ -0.7
PPFIA2-216ENST00000549396 MAP7D2Q96T17 732 aa10.71□□□□□ -0.7
PPFIA2-216ENST00000549396 CARD10Q9BWT7 1032 aa10.71□□□□□ -0.7
PPFIA2-216ENST00000549396 PDCL3Q9H2J4 239 aa10.71□□□□□ -0.7
PPFIA2-216ENST00000549396 USP6P35125 1406 aa10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 MAGEB6P1A0A0J9YX57 407 aa10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 LMOD1P29536 600 aaPredicted RBP10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 METAP2P50579 478 aaKnown RBP eCLIP10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 PDILTQ8N807 584 aa10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 WDR66Q8TBY9 1149 aa10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 CCDC183Q5T5S1 534 aa10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 FAM83GA6ND36 823 aa10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 ATP5J2-PTCD1G3V325 749 aa10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 CYP7A1P22680 504 aa10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 SLC4A3P48751 1232 aa10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 PDE1AP54750 535 aa10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 MCTP2Q6DN12 878 aa10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 UPF3BQ9BZI7 483 aaKnown RBP10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 PPP1R2P41236 205 aa10.7□□□□□ -0.7
PPFIA2-216ENST00000549396 SETQ01105 290 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms