RNA–Protein interactions for RNA: ENST00000549233.2

PMEL-208, Transcript of premelanosome protein, humanhuman

TSL 5

Gene PMEL, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-208ENST00000549233 NPHP3Q7Z494 1330 aa7.37□□□□□ -1.23
PMEL-208ENST00000549233 SKIP12755 728 aa7.37□□□□□ -1.23
PMEL-208ENST00000549233 PTGIRP43119 386 aa7.37□□□□□ -1.23
PMEL-208ENST00000549233 KIFC2Q96AC6 838 aa7.37□□□□□ -1.23
PMEL-208ENST00000549233 MAFBQ9Y5Q3 323 aaPredicted RBP7.37□□□□□ -1.23
PMEL-208ENST00000549233 COL24A1Q17RW2 1714 aa7.37□□□□□ -1.23
PMEL-208ENST00000549233 CDC42BPGQ6DT37 1551 aa7.37□□□□□ -1.23
PMEL-208ENST00000549233 TNS2Q63HR2 1409 aa7.36□□□□□ -1.23
PMEL-208ENST00000549233 TNRC18O15417 2968 aaPredicted RBP7.36□□□□□ -1.23
PMEL-208ENST00000549233 TOPAZ1Q8N9V7 1692 aa7.36□□□□□ -1.23
PMEL-208ENST00000549233 USP17L3A6NCW0 530 aa7.36□□□□□ -1.23
PMEL-208ENST00000549233 USP17L4A6NCW7 530 aa7.36□□□□□ -1.23
PMEL-208ENST00000549233 PALM3A6NDB9 673 aaPredicted RBP7.36□□□□□ -1.23
PMEL-208ENST00000549233 ATP5J2-PTCD1G3V325 749 aa7.36□□□□□ -1.23
PMEL-208ENST00000549233 WASLO00401 505 aaPredicted RBP7.36□□□□□ -1.23
PMEL-208ENST00000549233 NCOA4Q13772 614 aa7.36□□□□□ -1.23
PMEL-208ENST00000549233 SCARF1Q14162 830 aa7.36□□□□□ -1.23
PMEL-208ENST00000549233 USP17L2Q6R6M4 530 aa7.36□□□□□ -1.23
PMEL-208ENST00000549233 USP17L1Q7RTZ2 530 aa7.36□□□□□ -1.23
PMEL-208ENST00000549233 SIRT1Q96EB6 747 aa7.36□□□□□ -1.23
PMEL-208ENST00000549233 PURBQ96QR8 312 aaKnown RBP7.36□□□□□ -1.23
PMEL-208ENST00000549233 SLC52A1Q9NWF4 448 aa7.36□□□□□ -1.23
PMEL-208ENST00000549233 HRH3Q9Y5N1 445 aa7.36□□□□□ -1.23
PMEL-208ENST00000549233 PEAK1Q9H792 1746 aa7.35□□□□□ -1.23
PMEL-208ENST00000549233 FMN2Q9NZ56 1722 aa7.35□□□□□ -1.23
PMEL-208ENST00000549233 KANK1Q14678 1352 aa7.35□□□□□ -1.23
PMEL-208ENST00000549233 POTECB2RU33 542 aa7.35□□□□□ -1.23
PMEL-208ENST00000549233 MYCP01106 439 aaPredicted RBP7.35□□□□□ -1.23
PMEL-208ENST00000549233 GNRH1P01148 92 aa7.35□□□□□ -1.23
PMEL-208ENST00000549233 GPR162Q16538 588 aa7.35□□□□□ -1.23
PMEL-208ENST00000549233 EML3Q32P44 896 aa7.35□□□□□ -1.23
PMEL-208ENST00000549233 OXLD1Q5BKU9 147 aa7.35□□□□□ -1.23
PMEL-208ENST00000549233 CFAP70Q5T0N1 1121 aa7.35□□□□□ -1.23
PMEL-208ENST00000549233 AGBL1Q96MI9 1066 aa7.35□□□□□ -1.23
PMEL-208ENST00000549233 C1orf115Q9H7X2 142 aa7.35□□□□□ -1.23
PMEL-208ENST00000549233 PCDHGA11Q9Y5H2 935 aa7.35□□□□□ -1.23
PMEL-208ENST00000549233 IFT172Q9UG01 1749 aa7.35□□□□□ -1.23
PMEL-208ENST00000549233 ABCC5O15440 1437 aa7.35□□□□□ -1.23
PMEL-208ENST00000549233 KIF15Q9NS87 1388 aa7.34□□□□□ -1.23
PMEL-208ENST00000549233 TUBGCP6Q96RT7 1819 aa7.34□□□□□ -1.23
PMEL-208ENST00000549233 UPP2O95045 317 aa7.34□□□□□ -1.23
PMEL-208ENST00000549233 GPC1P35052 558 aa7.34□□□□□ -1.23
PMEL-208ENST00000549233 CLN3Q13286 438 aa7.34□□□□□ -1.23
PMEL-208ENST00000549233 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.34□□□□□ -1.23
PMEL-208ENST00000549233 TFIP11Q9UBB9 837 aaKnown RBP7.34□□□□□ -1.23
PMEL-208ENST00000549233 ARHGEF28Q8N1W1 1705 aaKnown RBP7.34□□□□□ -1.23
PMEL-208ENST00000549233 PARP4Q9UKK3 1724 aaKnown RBP7.33□□□□□ -1.24
PMEL-208ENST00000549233 FOXO3O43524 673 aa7.33□□□□□ -1.24
PMEL-208ENST00000549233 SCNN1DP51172 638 aa7.33□□□□□ -1.24
PMEL-208ENST00000549233 RELBQ01201 579 aa7.33□□□□□ -1.24
PMEL-208ENST00000549233 FAM196AQ6ZSG2 479 aa7.33□□□□□ -1.24
PMEL-208ENST00000549233 ZNF526Q8TF50 670 aaPredicted RBP7.33□□□□□ -1.24
PMEL-208ENST00000549233 WWC3Q9ULE0 1092 aa7.33□□□□□ -1.24
PMEL-208ENST00000549233 AKAP12Q02952 1782 aa7.33□□□□□ -1.24
PMEL-208ENST00000549233 MAP3K5Q99683 1374 aa7.33□□□□□ -1.24
PMEL-208ENST00000549233 SPATA31A3Q5VYP0 1347 aa7.32□□□□□ -1.24
PMEL-208ENST00000549233 ALS2Q96Q42 1657 aa7.32□□□□□ -1.24
PMEL-208ENST00000549233 A0A1W2PRU2 124 aa7.32□□□□□ -1.24
PMEL-208ENST00000549233 BMP2P12643 396 aa7.32□□□□□ -1.24
PMEL-208ENST00000549233 SNRPBP14678 240 aaKnown RBP7.32□□□□□ -1.24
PMEL-208ENST00000549233 RNF144AP50876 292 aaPredicted RBP7.32□□□□□ -1.24
PMEL-208ENST00000549233 SRPK2P78362 688 aaKnown RBP7.32□□□□□ -1.24
PMEL-208ENST00000549233 ESCO1Q5FWF5 840 aa7.32□□□□□ -1.24
PMEL-208ENST00000549233 KANK4Q5T7N3 995 aaPredicted RBP7.32□□□□□ -1.24
PMEL-208ENST00000549233 FOXD4L5Q5VV16 416 aaPredicted RBP7.32□□□□□ -1.24
PMEL-208ENST00000549233 NOD1Q9Y239 953 aa7.32□□□□□ -1.24
PMEL-208ENST00000549233 TRPM3Q9HCF6 1732 aaPredicted RBP7.32□□□□□ -1.24
PMEL-208ENST00000549233 SPATA31A5Q5VU36 1347 aa7.31□□□□□ -1.24
PMEL-208ENST00000549233 SPATA31A7Q8IWB4 1347 aa7.31□□□□□ -1.24
PMEL-208ENST00000549233 C11orf95C9JLR9 678 aaPredicted RBP7.31□□□□□ -1.24
PMEL-208ENST00000549233 DKK1O94907 266 aa7.31□□□□□ -1.24
PMEL-208ENST00000549233 IL2RAP01589 272 aa7.31□□□□□ -1.24
PMEL-208ENST00000549233 CTSOP43234 321 aaPredicted RBP7.31□□□□□ -1.24
PMEL-208ENST00000549233 GTF2IP78347 998 aa7.31□□□□□ -1.24
PMEL-208ENST00000549233 QSER1Q2KHR3 1735 aa7.31□□□□□ -1.24
PMEL-208ENST00000549233 C6orf118Q5T5N4 469 aa7.31□□□□□ -1.24
PMEL-208ENST00000549233 TNS3Q68CZ2 1445 aa7.31□□□□□ -1.24
PMEL-208ENST00000549233 DEPDC4Q8N2C3 294 aa7.31□□□□□ -1.24
PMEL-208ENST00000549233 RNF217Q8TC41 542 aa7.31□□□□□ -1.24
PMEL-208ENST00000549233 XAGE2Q96GT9 111 aa7.31□□□□□ -1.24
PMEL-208ENST00000549233 INSM2Q96T92 566 aaPredicted RBP7.31□□□□□ -1.24
PMEL-208ENST00000549233 ETNK1Q9HBU6 452 aa7.31□□□□□ -1.24
PMEL-208ENST00000549233 ARHGEF10LQ9HCE6 1279 aa7.31□□□□□ -1.24
PMEL-208ENST00000549233 WNK3Q9BYP7 1800 aa7.31□□□□□ -1.24
PMEL-208ENST00000549233 ADCY9O60503 1353 aa7.31□□□□□ -1.24
PMEL-208ENST00000549233 ROBO2Q9HCK4 1378 aa7.31□□□□□ -1.24
PMEL-208ENST00000549233 TTLL8A6PVC2 850 aa7.3□□□□□ -1.24
PMEL-208ENST00000549233 TMEM229AB2RXF0 380 aa7.3□□□□□ -1.24
PMEL-208ENST00000549233 CLDN10P78369 228 aa7.3□□□□□ -1.24
PMEL-208ENST00000549233 HTRA3P83110 453 aa7.3□□□□□ -1.24
PMEL-208ENST00000549233 ZNF787Q6DD87 383 aa7.3□□□□□ -1.24
PMEL-208ENST00000549233 TRIM50Q86XT4 487 aa7.3□□□□□ -1.24
PMEL-208ENST00000549233 SIX5Q8N196 739 aa7.3□□□□□ -1.24
PMEL-208ENST00000549233 ESYT1Q9BSJ8 1104 aa7.3□□□□□ -1.24
PMEL-208ENST00000549233 ZNF395Q9H8N7 513 aaPredicted RBP7.3□□□□□ -1.24
PMEL-208ENST00000549233 BTG4Q9NY30 223 aa7.3□□□□□ -1.24
PMEL-208ENST00000549233 DNMT3LQ9UJW3 386 aa7.3□□□□□ -1.24
PMEL-208ENST00000549233 ZBTB7BO15156 539 aaPredicted RBP7.29□□□□□ -1.24
PMEL-208ENST00000549233 ATP1A2P50993 1020 aa7.29□□□□□ -1.24
PMEL-208ENST00000549233 JMYQ8N9B5 988 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms