RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 USPL1Q5W0Q7 1092 aa6.21□□□□□ -1.42
SCAF11-212ENST00000549162 SLC4A9Q96Q91 983 aa6.21□□□□□ -1.42
SCAF11-212ENST00000549162 APAF1O14727 1248 aa6.21□□□□□ -1.42
SCAF11-212ENST00000549162 FOXO4P98177 505 aa6.21□□□□□ -1.42
SCAF11-212ENST00000549162 GIGYF2Q6Y7W6 1299 aaKnown RBP6.21□□□□□ -1.42
SCAF11-212ENST00000549162 MTMR14Q8NCE2 650 aa6.21□□□□□ -1.42
SCAF11-212ENST00000549162 KCNN1Q92952 543 aa6.21□□□□□ -1.42
SCAF11-212ENST00000549162 CASP8AP2Q9UKL3 1982 aa6.21□□□□□ -1.42
SCAF11-212ENST00000549162 GNAI3P08754 354 aa6.2□□□□□ -1.42
SCAF11-212ENST00000549162 MAP3K10Q02779 954 aa6.2□□□□□ -1.42
SCAF11-212ENST00000549162 DDX27Q96GQ7 796 aaKnown RBP6.2□□□□□ -1.42
SCAF11-212ENST00000549162 CREBZFQ9NS37 354 aa6.2□□□□□ -1.42
SCAF11-212ENST00000549162 NARFQ9UHQ1 456 aa6.2□□□□□ -1.42
SCAF11-212ENST00000549162 GINM1Q9NU53 330 aa6.2□□□□□ -1.42
SCAF11-212ENST00000549162 ARID4AP29374 1257 aaPredicted RBP6.2□□□□□ -1.42
SCAF11-212ENST00000549162 KAZALD1Q96I82 304 aa6.2□□□□□ -1.42
SCAF11-212ENST00000549162 CRAMP1Q96RY5 1269 aa6.2□□□□□ -1.42
SCAF11-212ENST00000549162 PLXNB2O15031 1838 aa6.2□□□□□ -1.42
SCAF11-212ENST00000549162 TRIM27P14373 513 aa6.19□□□□□ -1.42
SCAF11-212ENST00000549162 ATP6V1AP38606 617 aa6.19□□□□□ -1.42
SCAF11-212ENST00000549162 PDAP1Q13442 181 aaKnown RBP6.19□□□□□ -1.42
SCAF11-212ENST00000549162 STYK1Q6J9G0 422 aa6.19□□□□□ -1.42
SCAF11-212ENST00000549162 SCN9AQ15858 1988 aa6.19□□□□□ -1.42
SCAF11-212ENST00000549162 PLXNA1Q9UIW2 1896 aa6.19□□□□□ -1.42
SCAF11-212ENST00000549162 NTSR2O95665 410 aa6.19□□□□□ -1.42
SCAF11-212ENST00000549162 AMPHP49418 695 aa6.19□□□□□ -1.42
SCAF11-212ENST00000549162 TWISTNBQ3B726 338 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-212ENST00000549162 BMP2KLQ5H9B9 411 aa6.19□□□□□ -1.42
SCAF11-212ENST00000549162 FAM163AQ96GL9 167 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-212ENST00000549162 CRISPLD2Q9H0B8 497 aa6.19□□□□□ -1.42
SCAF11-212ENST00000549162 TCERG1O14776 1098 aaKnown RBP6.19□□□□□ -1.42
SCAF11-212ENST00000549162 HSP90AB4PQ58FF6 505 aa6.19□□□□□ -1.42
SCAF11-212ENST00000549162 SSH1Q8WYL5 1049 aa6.19□□□□□ -1.42
SCAF11-212ENST00000549162 AGXT2Q9BYV1 514 aa6.19□□□□□ -1.42
SCAF11-212ENST00000549162 PCP11498 1178 aaKnown RBP6.18□□□□□ -1.42
SCAF11-212ENST00000549162 ALX1Q15699 326 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 LARP1Q6PKG0 1096 aaKnown RBP6.18□□□□□ -1.42
SCAF11-212ENST00000549162 ERC1Q8IUD2 1116 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 PCMTD1Q96MG8 357 aaPredicted RBP6.18□□□□□ -1.42
SCAF11-212ENST00000549162 AFF2P51816 1311 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 NBPF26B4DH59 902 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 FOXO3O43524 673 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 CC2D1BQ5T0F9 858 aaKnown RBP6.18□□□□□ -1.42
SCAF11-212ENST00000549162 NBPF14Q5TI25 921 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 NBPF10Q6P3W6 841 aaKnown RBP6.18□□□□□ -1.42
SCAF11-212ENST00000549162 NBPF15Q8N660 670 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 ZBTB38Q8NAP3 1195 aaPredicted RBP6.18□□□□□ -1.42
SCAF11-212ENST00000549162 C8orf58Q8NAV2 365 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 PCDHB8Q9UN66 801 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 PCDHB13Q9Y5F0 798 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 FAM205AQ6ZU69 1335 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 GHRHRQ02643 423 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 RRS1Q15050 365 aaKnown RBP6.18□□□□□ -1.42
SCAF11-212ENST00000549162 PIGBQ92521 554 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 ARID2Q68CP9 1835 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 NEURL1BA8MQ27 555 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 IRF6O14896 467 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 ANAPC15P60006 121 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 MAP2K5Q13163 448 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 TCIRG1Q13488 830 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 CC2D2BQ6DHV5 1058 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 CEP85Q6P2H3 762 aa6.18□□□□□ -1.42
SCAF11-212ENST00000549162 ATRNL1Q5VV63 1379 aa6.17□□□□□ -1.42
SCAF11-212ENST00000549162 CAPN2P17655 700 aa6.17□□□□□ -1.42
SCAF11-212ENST00000549162 PDE4AP27815 886 aa6.17□□□□□ -1.42
SCAF11-212ENST00000549162 GIMAP6Q6P9H5 292 aa6.17□□□□□ -1.42
SCAF11-212ENST00000549162 ZNF496Q96IT1 587 aaPredicted RBP6.17□□□□□ -1.42
SCAF11-212ENST00000549162 MAP3K14Q99558 947 aa6.17□□□□□ -1.42
SCAF11-212ENST00000549162 BCL2L12Q9HB09 334 aa6.17□□□□□ -1.42
SCAF11-212ENST00000549162 MGAMO43451 1857 aa6.17□□□□□ -1.42
SCAF11-212ENST00000549162 HDLBPQ00341 1268 aaKnown RBP6.17□□□□□ -1.42
SCAF11-212ENST00000549162 ZNF467Q7Z7K2 595 aaPredicted RBP6.17□□□□□ -1.42
SCAF11-212ENST00000549162 SIRT2Q8IXJ6 389 aa6.17□□□□□ -1.42
SCAF11-212ENST00000549162 DZIP1LQ8IYY4 767 aaKnown RBP6.17□□□□□ -1.42
SCAF11-212ENST00000549162 SNX21Q969T3 373 aa6.17□□□□□ -1.42
SCAF11-212ENST00000549162 ZBED3Q96IU2 234 aaPredicted RBP6.17□□□□□ -1.42
SCAF11-212ENST00000549162 NGLY1Q96IV0 654 aa6.17□□□□□ -1.42
SCAF11-212ENST00000549162 HIRIP3Q9BW71 556 aaPredicted RBP6.17□□□□□ -1.42
SCAF11-212ENST00000549162 RAPGEF4Q8WZA2 1011 aa6.17□□□□□ -1.42
SCAF11-212ENST00000549162 IGKV5-2P06315 115 aa6.16□□□□□ -1.42
SCAF11-212ENST00000549162 HSPA1LP34931 641 aa6.16□□□□□ -1.42
SCAF11-212ENST00000549162 TTLL12Q14166 644 aaPredicted RBP6.16□□□□□ -1.42
SCAF11-212ENST00000549162 C7orf43Q8WVR3 580 aa6.16□□□□□ -1.42
SCAF11-212ENST00000549162 USP44Q9H0E7 712 aa6.16□□□□□ -1.42
SCAF11-212ENST00000549162 ANAPC4Q9UJX5 808 aa6.16□□□□□ -1.42
SCAF11-212ENST00000549162 MROH5Q6ZUA9 1318 aa6.16□□□□□ -1.42
SCAF11-212ENST00000549162 U2AF1L5P0DN76 240 aaPredicted RBP6.16□□□□□ -1.42
SCAF11-212ENST00000549162 U2AF1Q01081 240 aaKnown RBP eCLIP6.16□□□□□ -1.42
SCAF11-212ENST00000549162 C1orf141Q5JVX7 400 aa6.16□□□□□ -1.42
SCAF11-212ENST00000549162 ANKS1AQ92625 1134 aa6.16□□□□□ -1.42
SCAF11-212ENST00000549162 COG6Q9Y2V7 657 aa6.16□□□□□ -1.42
SCAF11-212ENST00000549162 ZNF536O15090 1300 aa6.15□□□□□ -1.42
SCAF11-212ENST00000549162 PNPLA7Q6ZV29 1317 aa6.15□□□□□ -1.42
SCAF11-212ENST00000549162 COL4A5P29400 1685 aa6.15□□□□□ -1.42
SCAF11-212ENST00000549162 ZNF530Q6P9A1 599 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-212ENST00000549162 EFCAB3Q8N7B9 438 aa6.15□□□□□ -1.42
SCAF11-212ENST00000549162 NYXQ9GZU5 481 aa6.15□□□□□ -1.42
SCAF11-212ENST00000549162 DEFB129Q9H1M3 183 aa6.15□□□□□ -1.42
SCAF11-212ENST00000549162 WDR81Q562E7 1941 aa6.15□□□□□ -1.42
SCAF11-212ENST00000549162 GCKRQ14397 625 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms