RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 DPEP1P16444 411 aa26.47■■□□□ 1.83
CACNB3-210ENST00000548874 KCNA3P22001 575 aa26.47■■□□□ 1.83
CACNB3-210ENST00000548874 HOXA10P31260 410 aaPredicted RBP26.47■■□□□ 1.83
CACNB3-210ENST00000548874 RABL6Q3YEC7 729 aaPredicted RBP26.47■■□□□ 1.83
CACNB3-210ENST00000548874 ANKRD44Q8N8A2 993 aa26.47■■□□□ 1.83
CACNB3-210ENST00000548874 NLGN2Q8NFZ4 835 aa26.47■■□□□ 1.83
CACNB3-210ENST00000548874 CHMP4BQ9H444 224 aaKnown RBP26.47■■□□□ 1.83
CACNB3-210ENST00000548874 BICC1Q9H694 974 aaKnown RBP26.47■■□□□ 1.83
CACNB3-210ENST00000548874 LRRFIP2Q9Y608 721 aaKnown RBP26.47■■□□□ 1.83
CACNB3-210ENST00000548874 RTL9Q8NET4 1388 aa26.46■■□□□ 1.83
CACNB3-210ENST00000548874 CRBNQ96SW2 442 aa26.46■■□□□ 1.83
CACNB3-210ENST00000548874 ZBTB40Q9NUA8 1239 aa26.46■■□□□ 1.83
CACNB3-210ENST00000548874 A0A0G2JLW4 131 aa26.45■■□□□ 1.82
CACNB3-210ENST00000548874 GNAI2P04899 355 aa26.45■■□□□ 1.82
CACNB3-210ENST00000548874 NPR1P16066 1061 aa26.45■■□□□ 1.82
CACNB3-210ENST00000548874 CCDC152Q4G0S7 254 aa26.45■■□□□ 1.82
CACNB3-210ENST00000548874 STYK1Q6J9G0 422 aa26.45■■□□□ 1.82
CACNB3-210ENST00000548874 MASTLQ96GX5 879 aa26.45■■□□□ 1.82
CACNB3-210ENST00000548874 LMBR1LQ6UX01 489 aa26.44■■□□□ 1.82
CACNB3-210ENST00000548874 RPGRQ92834 1020 aaKnown RBP26.44■■□□□ 1.82
CACNB3-210ENST00000548874 BRCA1P38398 1863 aaKnown RBP26.42■■□□□ 1.82
CACNB3-210ENST00000548874 CRAMP1Q96RY5 1269 aa26.42■■□□□ 1.82
CACNB3-210ENST00000548874 GREM2Q9H772 168 aa26.42■■□□□ 1.82
CACNB3-210ENST00000548874 MTX1Q13505 466 aa26.41■■□□□ 1.82
CACNB3-210ENST00000548874 FAM161AQ3B820 660 aa26.41■■□□□ 1.82
CACNB3-210ENST00000548874 RBM17Q96I25 401 aaKnown RBP26.41■■□□□ 1.82
CACNB3-210ENST00000548874 CCDC85AQ96PX6 553 aaPredicted RBP26.41■■□□□ 1.82
CACNB3-210ENST00000548874 DDX46Q7L014 1031 aaKnown RBP26.4■■□□□ 1.82
CACNB3-210ENST00000548874 C1orf115Q9H7X2 142 aa26.4■■□□□ 1.82
CACNB3-210ENST00000548874 COL4A1P02462 1669 aa26.4■■□□□ 1.82
CACNB3-210ENST00000548874 CNKSR1Q969H4 720 aa26.39■■□□□ 1.82
CACNB3-210ENST00000548874 ZNF622Q969S3 477 aaKnown RBP eCLIP26.39■■□□□ 1.82
CACNB3-210ENST00000548874 SEC31BQ9NQW1 1179 aa26.39■■□□□ 1.82
CACNB3-210ENST00000548874 ITGA6P23229 1130 aa26.38■■□□□ 1.81
CACNB3-210ENST00000548874 ALDH1B1P30837 517 aa26.38■■□□□ 1.81
CACNB3-210ENST00000548874 GRAPQ13588 217 aa26.38■■□□□ 1.81
CACNB3-210ENST00000548874 GRAPLQ8TC17 118 aaPredicted RBP26.38■■□□□ 1.81
CACNB3-210ENST00000548874 PIM2Q9P1W9 311 aa26.38■■□□□ 1.81
CACNB3-210ENST00000548874 IRX6P78412 446 aaPredicted RBP26.37■■□□□ 1.81
CACNB3-210ENST00000548874 EXOC6Q8TAG9 804 aa26.37■■□□□ 1.81
CACNB3-210ENST00000548874 CHMP3Q9Y3E7 222 aa26.37■■□□□ 1.81
CACNB3-210ENST00000548874 IFIT5Q13325 482 aaKnown RBP26.36■■□□□ 1.81
CACNB3-210ENST00000548874 TTLL6Q8N841 843 aa26.36■■□□□ 1.81
CACNB3-210ENST00000548874 CELF1Q92879 486 aaKnown RBP26.36■■□□□ 1.81
CACNB3-210ENST00000548874 TAF1P21675 1872 aa26.36■■□□□ 1.81
CACNB3-210ENST00000548874 ANKRD18BA2A2Z9 1011 aa26.35■■□□□ 1.81
CACNB3-210ENST00000548874 RFX5P48382 616 aaPredicted RBP26.35■■□□□ 1.81
CACNB3-210ENST00000548874 CEP85Q6P2H3 762 aa26.35■■□□□ 1.81
CACNB3-210ENST00000548874 CDC5LQ99459 802 aaKnown RBP26.35■■□□□ 1.81
CACNB3-210ENST00000548874 SRCAPQ6ZRS2 3230 aa26.35■■□□□ 1.81
CACNB3-210ENST00000548874 ATP8B2P98198 1209 aa26.34■■□□□ 1.81
CACNB3-210ENST00000548874 AAMPQ13685 434 aa26.34■■□□□ 1.81
CACNB3-210ENST00000548874 CCDC57Q2TAC2 916 aa26.34■■□□□ 1.81
CACNB3-210ENST00000548874 PRPF40BQ6NWY9 871 aaKnown RBP26.34■■□□□ 1.81
CACNB3-210ENST00000548874 SLX4Q8IY92 1834 aa26.34■■□□□ 1.81
CACNB3-210ENST00000548874 PNMA6EA0A0J9YXQ4 647 aa26.33■■□□□ 1.81
CACNB3-210ENST00000548874 BBOX1O75936 387 aa26.33■■□□□ 1.81
CACNB3-210ENST00000548874 RPS8P62241 208 aaKnown RBP26.33■■□□□ 1.81
CACNB3-210ENST00000548874 DALRD3Q5D0E6 543 aaKnown RBP26.33■■□□□ 1.81
CACNB3-210ENST00000548874 SRGAP3O43295 1099 aa26.32■■□□□ 1.8
CACNB3-210ENST00000548874 ANKRD18AQ8IVF6 992 aa26.32■■□□□ 1.8
CACNB3-210ENST00000548874 RPAP2Q8IXW5 612 aaPredicted RBP26.32■■□□□ 1.8
CACNB3-210ENST00000548874 CACNA1SQ13698 1873 aa26.32■■□□□ 1.8
CACNB3-210ENST00000548874 POLA2Q14181 598 aa26.31■■□□□ 1.8
CACNB3-210ENST00000548874 SSH3Q8TE77 659 aa26.31■■□□□ 1.8
CACNB3-210ENST00000548874 C7orf43Q8WVR3 580 aa26.31■■□□□ 1.8
CACNB3-210ENST00000548874 PPEF1O14829 653 aaPredicted RBP26.3■■□□□ 1.8
CACNB3-210ENST00000548874 TMC4Q7Z404 712 aa26.3■■□□□ 1.8
CACNB3-210ENST00000548874 LRRC37AA6NMS7 1700 aa26.29■■□□□ 1.8
CACNB3-210ENST00000548874 PTPN12Q05209 780 aaKnown RBP26.29■■□□□ 1.8
CACNB3-210ENST00000548874 SIRT2Q8IXJ6 389 aa26.29■■□□□ 1.8
CACNB3-210ENST00000548874 ZNF594Q96JF6 807 aaPredicted RBP26.29■■□□□ 1.8
CACNB3-210ENST00000548874 BSDC1Q9NW68 430 aaPredicted RBP26.29■■□□□ 1.8
CACNB3-210ENST00000548874 WWC3Q9ULE0 1092 aa26.29■■□□□ 1.8
CACNB3-210ENST00000548874 ARFGEF1Q9Y6D6 1849 aa26.28■■□□□ 1.8
CACNB3-210ENST00000548874 IGHMBP2P38935 993 aaKnown RBP26.28■■□□□ 1.8
CACNB3-210ENST00000548874 COPRSQ9NQ92 184 aa26.28■■□□□ 1.8
CACNB3-210ENST00000548874 BCS1LQ9Y276 419 aa26.28■■□□□ 1.8
CACNB3-210ENST00000548874 ATP6V0A2Q9Y487 856 aa26.28■■□□□ 1.8
CACNB3-210ENST00000548874 PCDHB15Q9Y5E8 787 aa26.28■■□□□ 1.8
CACNB3-210ENST00000548874 TAF7LQ5H9L4 462 aa26.27■■□□□ 1.8
CACNB3-210ENST00000548874 SP8Q8IXZ3 490 aa26.27■■□□□ 1.8
CACNB3-210ENST00000548874 KLHDC4Q8TBB5 520 aa26.27■■□□□ 1.8
CACNB3-210ENST00000548874 SPEF2Q9C093 1822 aa26.27■■□□□ 1.8
CACNB3-210ENST00000548874 SNED1Q8TER0 1413 aa26.26■■□□□ 1.79
CACNB3-210ENST00000548874 SLC51AQ86UW1 340 aa26.26■■□□□ 1.79
CACNB3-210ENST00000548874 C21orf2O43822 256 aa26.25■■□□□ 1.79
CACNB3-210ENST00000548874 MPHOSPH8Q99549 860 aa26.25■■□□□ 1.79
CACNB3-210ENST00000548874 CC2D2BQ6DHV5 1058 aa26.24■■□□□ 1.79
CACNB3-210ENST00000548874 LDHAL6AQ6ZMR3 332 aa26.24■■□□□ 1.79
CACNB3-210ENST00000548874 PUS3Q9BZE2 481 aaKnown RBP26.24■■□□□ 1.79
CACNB3-210ENST00000548874 FBXO3Q9UK99 471 aa26.24■■□□□ 1.79
CACNB3-210ENST00000548874 PA2G4Q9UQ80 394 aaKnown RBP26.24■■□□□ 1.79
CACNB3-210ENST00000548874 HMMRO75330 724 aa26.23■■□□□ 1.79
CACNB3-210ENST00000548874 YBX3P16989 372 aaKnown RBP eCLIP26.23■■□□□ 1.79
CACNB3-210ENST00000548874 OLFM4Q6UX06 510 aa26.23■■□□□ 1.79
CACNB3-210ENST00000548874 RIPOR2Q9Y4F9 1068 aa26.23■■□□□ 1.79
CACNB3-210ENST00000548874 EYA2O00167 538 aa26.22■■□□□ 1.79
CACNB3-210ENST00000548874 NEFLP07196 543 aa26.22■■□□□ 1.79
CACNB3-210ENST00000548874 SOGA3Q5TF21 947 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms