RNA–Protein interactions for RNA: ENST00000548868.5

SCRN3-212, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-212ENST00000548868 SYNE4Q8N205 404 aa14.04□□□□□ -0.16
SCRN3-212ENST00000548868 CCDC136Q96JN2 1154 aa14.04□□□□□ -0.16
SCRN3-212ENST00000548868 PDGFDQ9GZP0 370 aaPredicted RBP14.04□□□□□ -0.16
SCRN3-212ENST00000548868 RWDD1Q9H446 243 aaPredicted RBP14.04□□□□□ -0.16
SCRN3-212ENST00000548868 ANKRD31Q8N7Z5 1873 aa14.03□□□□□ -0.16
SCRN3-212ENST00000548868 EPHA10Q5JZY3 1008 aa14.03□□□□□ -0.16
SCRN3-212ENST00000548868 PRR5LQ6MZQ0 368 aa14.03□□□□□ -0.16
SCRN3-212ENST00000548868 MTFR1LQ9H019 292 aa14.03□□□□□ -0.16
SCRN3-212ENST00000548868 ABCC12Q96J65 1359 aa14.02□□□□□ -0.16
SCRN3-212ENST00000548868 CSF1RP07333 972 aa14.02□□□□□ -0.16
SCRN3-212ENST00000548868 CTSWP56202 376 aa14.02□□□□□ -0.16
SCRN3-212ENST00000548868 LMBR1LQ6UX01 489 aa14.02□□□□□ -0.16
SCRN3-212ENST00000548868 SIRT2Q8IXJ6 389 aa14.02□□□□□ -0.16
SCRN3-212ENST00000548868 SSH3Q8TE77 659 aa14.02□□□□□ -0.16
SCRN3-212ENST00000548868 TNRC6CQ9HCJ0 1690 aaKnown RBP14.02□□□□□ -0.17
SCRN3-212ENST00000548868 SRGAP3O43295 1099 aa14.01□□□□□ -0.17
SCRN3-212ENST00000548868 HCLS1P14317 486 aaPredicted RBP14.01□□□□□ -0.17
SCRN3-212ENST00000548868 POLA2Q14181 598 aa14.01□□□□□ -0.17
SCRN3-212ENST00000548868 NLRP3Q96P20 1036 aa14.01□□□□□ -0.17
SCRN3-212ENST00000548868 RTL9Q8NET4 1388 aa14.01□□□□□ -0.17
SCRN3-212ENST00000548868 PNMA6EA0A0J9YXQ4 647 aa14□□□□□ -0.17
SCRN3-212ENST00000548868 SF3B3Q15393 1217 aaKnown RBP14□□□□□ -0.17
SCRN3-212ENST00000548868 CCDC152Q4G0S7 254 aa14□□□□□ -0.17
SCRN3-212ENST00000548868 TTLL11Q8NHH1 800 aa14□□□□□ -0.17
SCRN3-212ENST00000548868 KIF13BQ9NQT8 1826 aa14□□□□□ -0.17
SCRN3-212ENST00000548868 PSDA5PKW4 1024 aaPredicted RBP14□□□□□ -0.17
SCRN3-212ENST00000548868 SOCS7O14512 581 aa13.99□□□□□ -0.17
SCRN3-212ENST00000548868 ZBTB7AO95365 584 aa13.99□□□□□ -0.17
SCRN3-212ENST00000548868 POLD1P28340 1107 aa13.99□□□□□ -0.17
SCRN3-212ENST00000548868 B4GALNT3Q6L9W6 998 aa13.99□□□□□ -0.17
SCRN3-212ENST00000548868 BRIP1Q9BX63 1249 aa13.99□□□□□ -0.17
SCRN3-212ENST00000548868 CHMP3Q9Y3E7 222 aa13.99□□□□□ -0.17
SCRN3-212ENST00000548868 SPEF2Q9C093 1822 aa13.98□□□□□ -0.17
SCRN3-212ENST00000548868 IGHDP01880 384 aa13.98□□□□□ -0.17
SCRN3-212ENST00000548868 IFIT5Q13325 482 aaKnown RBP13.98□□□□□ -0.17
SCRN3-212ENST00000548868 CCDC57Q2TAC2 916 aa13.98□□□□□ -0.17
SCRN3-212ENST00000548868 CENPQQ7L2Z9 268 aaPredicted RBP13.98□□□□□ -0.17
SCRN3-212ENST00000548868 GCC1Q96CN9 775 aa13.98□□□□□ -0.17
SCRN3-212ENST00000548868 KDM2BQ8NHM5 1336 aa13.97□□□□□ -0.17
SCRN3-212ENST00000548868 ANKRD18BA2A2Z9 1011 aa13.97□□□□□ -0.17
SCRN3-212ENST00000548868 RFX5P48382 616 aaPredicted RBP13.97□□□□□ -0.17
SCRN3-212ENST00000548868 FAM161AQ3B820 660 aa13.97□□□□□ -0.17
SCRN3-212ENST00000548868 GREM2Q9H772 168 aa13.97□□□□□ -0.17
SCRN3-212ENST00000548868 DCTPP1Q9H773 170 aa13.97□□□□□ -0.17
SCRN3-212ENST00000548868 COPRSQ9NQ92 184 aa13.97□□□□□ -0.17
SCRN3-212ENST00000548868 PDZRN3Q9UPQ7 1066 aa13.97□□□□□ -0.17
SCRN3-212ENST00000548868 DLEC1Q9Y238 1755 aa13.97□□□□□ -0.17
SCRN3-212ENST00000548868 TAF1P21675 1872 aa13.97□□□□□ -0.17
SCRN3-212ENST00000548868 COL11A2P13942 1736 aaPredicted RBP13.97□□□□□ -0.17
SCRN3-212ENST00000548868 C10orf71Q711Q0 1435 aa13.96□□□□□ -0.17
SCRN3-212ENST00000548868 KLRG2A4D1S0 409 aaPredicted RBP13.96□□□□□ -0.17
SCRN3-212ENST00000548868 ITGA6P23229 1130 aa13.96□□□□□ -0.17
SCRN3-212ENST00000548868 PDE6BP35913 854 aa13.96□□□□□ -0.17
SCRN3-212ENST00000548868 CRY2Q49AN0 593 aa13.96□□□□□ -0.17
SCRN3-212ENST00000548868 HSP90AB4PQ58FF6 505 aa13.96□□□□□ -0.17
SCRN3-212ENST00000548868 CCDC24Q8N4L8 307 aa13.96□□□□□ -0.17
SCRN3-212ENST00000548868 FBXO3Q9UK99 471 aa13.96□□□□□ -0.17
SCRN3-212ENST00000548868 NOP58Q9Y2X3 529 aaKnown RBP13.96□□□□□ -0.17
SCRN3-212ENST00000548868 LRP5O75197 1615 aa13.96□□□□□ -0.17
SCRN3-212ENST00000548868 PTPN12Q05209 780 aaKnown RBP13.96□□□□□ -0.18
SCRN3-212ENST00000548868 C3orf67Q6ZVT6 689 aa13.96□□□□□ -0.18
SCRN3-212ENST00000548868 SMC5Q8IY18 1101 aa13.96□□□□□ -0.18
SCRN3-212ENST00000548868 ATF5Q9Y2D1 282 aaPredicted RBP13.96□□□□□ -0.18
SCRN3-212ENST00000548868 SURF6O75683 361 aaKnown RBP13.95□□□□□ -0.18
SCRN3-212ENST00000548868 TAF7LQ5H9L4 462 aa13.95□□□□□ -0.18
SCRN3-212ENST00000548868 CCDC85AQ96PX6 553 aaPredicted RBP13.95□□□□□ -0.18
SCRN3-212ENST00000548868 CDC5LQ99459 802 aaKnown RBP13.95□□□□□ -0.18
SCRN3-212ENST00000548868 SGIP1Q9BQI5 828 aa13.95□□□□□ -0.18
SCRN3-212ENST00000548868 RAB11FIP3O75154 756 aa13.94□□□□□ -0.18
SCRN3-212ENST00000548868 DDX46Q7L014 1031 aaKnown RBP13.94□□□□□ -0.18
SCRN3-212ENST00000548868 RPGRQ92834 1020 aaKnown RBP13.94□□□□□ -0.18
SCRN3-212ENST00000548868 CACNA1SQ13698 1873 aa13.93□□□□□ -0.18
SCRN3-212ENST00000548868 A0A1B0GUL6 1792 aa13.93□□□□□ -0.18
SCRN3-212ENST00000548868 CIAO1O76071 339 aa13.93□□□□□ -0.18
SCRN3-212ENST00000548868 HOXA10P31260 410 aaPredicted RBP13.93□□□□□ -0.18
SCRN3-212ENST00000548868 G3BP1Q13283 466 aaKnown RBP eCLIP13.93□□□□□ -0.18
SCRN3-212ENST00000548868 ERC1Q8IUD2 1116 aa13.93□□□□□ -0.18
SCRN3-212ENST00000548868 RBM17Q96I25 401 aaKnown RBP13.93□□□□□ -0.18
SCRN3-212ENST00000548868 SPON1Q9HCB6 807 aa13.93□□□□□ -0.18
SCRN3-212ENST00000548868 PA2G4Q9UQ80 394 aaKnown RBP13.93□□□□□ -0.18
SCRN3-212ENST00000548868 EYA2O00167 538 aa13.92□□□□□ -0.18
SCRN3-212ENST00000548868 IGHMBP2P38935 993 aaKnown RBP13.92□□□□□ -0.18
SCRN3-212ENST00000548868 ANKRD18AQ8IVF6 992 aa13.92□□□□□ -0.18
SCRN3-212ENST00000548868 KLHDC4Q8TBB5 520 aa13.92□□□□□ -0.18
SCRN3-212ENST00000548868 CRAMP1Q96RY5 1269 aa13.92□□□□□ -0.18
SCRN3-212ENST00000548868 SEC31BQ9NQW1 1179 aa13.92□□□□□ -0.18
SCRN3-212ENST00000548868 EXOC6BQ9Y2D4 811 aa13.92□□□□□ -0.18
SCRN3-212ENST00000548868 KIAA1551Q9HCM1 1747 aa13.92□□□□□ -0.18
SCRN3-212ENST00000548868 SRGNP10124 158 aa13.92□□□□□ -0.18
SCRN3-212ENST00000548868 NPR1P16066 1061 aa13.92□□□□□ -0.18
SCRN3-212ENST00000548868 IL15P40933 162 aaPredicted RBP13.92□□□□□ -0.18
SCRN3-212ENST00000548868 PTGER2P43116 358 aa13.92□□□□□ -0.18
SCRN3-212ENST00000548868 OS9Q13438 667 aaPredicted RBP13.92□□□□□ -0.18
SCRN3-212ENST00000548868 GRAPQ13588 217 aa13.92□□□□□ -0.18
SCRN3-212ENST00000548868 GRAPLQ8TC17 118 aaPredicted RBP13.92□□□□□ -0.18
SCRN3-212ENST00000548868 MASTLQ96GX5 879 aa13.92□□□□□ -0.18
SCRN3-212ENST00000548868 ZNF594Q96JF6 807 aaPredicted RBP13.92□□□□□ -0.18
SCRN3-212ENST00000548868 MPHOSPH8Q99549 860 aa13.92□□□□□ -0.18
SCRN3-212ENST00000548868 FOXD4L1Q9NU39 408 aa13.92□□□□□ -0.18
SCRN3-212ENST00000548868 COL4A1P02462 1669 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms