RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 TSGA10IPQ3SY00 556 aa27.2■■□□□ 1.95
NPAS3-206ENST00000548645 A0A0D9SFI3 127 aa27.2■■□□□ 1.94
NPAS3-206ENST00000548645 NYAP1Q6ZVC0 841 aa27.2■■□□□ 1.94
NPAS3-206ENST00000548645 KRT222Q8N1A0 295 aa27.2■■□□□ 1.94
NPAS3-206ENST00000548645 FSD1Q9BTV5 496 aa27.2■■□□□ 1.94
NPAS3-206ENST00000548645 STX1AQ16623 288 aa27.2■■□□□ 1.94
NPAS3-206ENST00000548645 SLFN14P0C7P3 912 aa27.19■■□□□ 1.94
NPAS3-206ENST00000548645 SKILP12757 684 aa27.19■■□□□ 1.94
NPAS3-206ENST00000548645 H3BQV1 296 aa27.19■■□□□ 1.94
NPAS3-206ENST00000548645 IFFO2Q5TF58 517 aa27.19■■□□□ 1.94
NPAS3-206ENST00000548645 LTV1Q96GA3 475 aaPredicted RBP27.19■■□□□ 1.94
NPAS3-206ENST00000548645 BRF1Q92994 677 aa27.18■■□□□ 1.94
NPAS3-206ENST00000548645 GTF3C6Q969F1 213 aa27.18■■□□□ 1.94
NPAS3-206ENST00000548645 ZNF215Q9UL58 517 aaPredicted RBP27.18■■□□□ 1.94
NPAS3-206ENST00000548645 KRT32Q14532 448 aa27.18■■□□□ 1.94
NPAS3-206ENST00000548645 MED23Q9ULK4 1368 aa27.18■■□□□ 1.94
NPAS3-206ENST00000548645 ANXA1P04083 346 aa27.17■■□□□ 1.94
NPAS3-206ENST00000548645 G3BP1Q13283 466 aaKnown RBP eCLIP27.17■■□□□ 1.94
NPAS3-206ENST00000548645 ERO1AQ96HE7 468 aa27.17■■□□□ 1.94
NPAS3-206ENST00000548645 USP27XA6NNY8 438 aa27.17■■□□□ 1.94
NPAS3-206ENST00000548645 BECN2A8MW95 431 aa27.17■■□□□ 1.94
NPAS3-206ENST00000548645 EAF2Q96CJ1 260 aaPredicted RBP27.17■■□□□ 1.94
NPAS3-206ENST00000548645 C11orf57Q6ZUT1 292 aaPredicted RBP27.17■■□□□ 1.94
NPAS3-206ENST00000548645 TAF6LQ9Y6J9 622 aa27.17■■□□□ 1.94
NPAS3-206ENST00000548645 PIK3C2AO00443 1686 aa27.16■■□□□ 1.94
NPAS3-206ENST00000548645 JAK2O60674 1132 aa27.16■■□□□ 1.94
NPAS3-206ENST00000548645 CEBPAP49715 358 aaPredicted RBP27.16■■□□□ 1.94
NPAS3-206ENST00000548645 KMT5BQ4FZB7 885 aa27.16■■□□□ 1.94
NPAS3-206ENST00000548645 A0A0U1RQG5 324 aaPredicted RBP27.16■■□□□ 1.94
NPAS3-206ENST00000548645 ARID5BQ14865 1188 aa27.16■■□□□ 1.94
NPAS3-206ENST00000548645 CCDC8Q9H0W5 538 aaPredicted RBP27.16■■□□□ 1.94
NPAS3-206ENST00000548645 DBF4Q9UBU7 674 aaPredicted RBP27.16■■□□□ 1.94
NPAS3-206ENST00000548645 MAP3K2Q9Y2U5 619 aa27.15■■□□□ 1.94
NPAS3-206ENST00000548645 CCDC69A6NI79 296 aa27.15■■□□□ 1.94
NPAS3-206ENST00000548645 SASH1O94885 1247 aa27.15■■□□□ 1.94
NPAS3-206ENST00000548645 JCADQ9P266 1359 aa27.15■■□□□ 1.94
NPAS3-206ENST00000548645 KIF2AO00139 706 aaPredicted RBP27.14■■□□□ 1.94
NPAS3-206ENST00000548645 TERF2Q15554 542 aa27.14■■□□□ 1.94
NPAS3-206ENST00000548645 BOLA2Q9H3K6 86 aa27.14■■□□□ 1.94
NPAS3-206ENST00000548645 TNRQ92752 1358 aa27.14■■□□□ 1.93
NPAS3-206ENST00000548645 SLFNL1Q499Z3 407 aa27.13■■□□□ 1.93
NPAS3-206ENST00000548645 KCND1Q9NSA2 647 aa27.13■■□□□ 1.93
NPAS3-206ENST00000548645 CCZ1BP86790 482 aa27.13■■□□□ 1.93
NPAS3-206ENST00000548645 CCZ1P86791 482 aaPredicted RBP27.13■■□□□ 1.93
NPAS3-206ENST00000548645 FILIP1Q7Z7B0 1213 aa27.13■■□□□ 1.93
NPAS3-206ENST00000548645 KSR2Q6VAB6 950 aa27.12■■□□□ 1.93
NPAS3-206ENST00000548645 CCAR1Q8IX12 1150 aaKnown RBP27.12■■□□□ 1.93
NPAS3-206ENST00000548645 CCAR2Q8N163 923 aaKnown RBP27.12■■□□□ 1.93
NPAS3-206ENST00000548645 USHBP1Q8N6Y0 703 aa27.12■■□□□ 1.93
NPAS3-206ENST00000548645 DDX11Q96FC9 970 aa27.12■■□□□ 1.93
NPAS3-206ENST00000548645 LGR6Q9HBX8 967 aa27.12■■□□□ 1.93
NPAS3-206ENST00000548645 ANO10Q9NW15 660 aa27.12■■□□□ 1.93
NPAS3-206ENST00000548645 USP16Q9Y5T5 823 aa27.12■■□□□ 1.93
NPAS3-206ENST00000548645 MED1Q15648 1581 aaPredicted RBP27.12■■□□□ 1.93
NPAS3-206ENST00000548645 TAF5LO75529 589 aa27.12■■□□□ 1.93
NPAS3-206ENST00000548645 ZNF589Q86UQ0 364 aaPredicted RBP27.12■■□□□ 1.93
NPAS3-206ENST00000548645 NEK1Q96PY6 1258 aa27.12■■□□□ 1.93
NPAS3-206ENST00000548645 PLEKHG1Q9ULL1 1385 aa27.11■■□□□ 1.93
NPAS3-206ENST00000548645 SLU7O95391 586 aaKnown RBP27.11■■□□□ 1.93
NPAS3-206ENST00000548645 USPL1Q5W0Q7 1092 aa27.11■■□□□ 1.93
NPAS3-206ENST00000548645 CCDC73Q6ZRK6 1079 aa27.11■■□□□ 1.93
NPAS3-206ENST00000548645 KCNQ3O43525 872 aa27.11■■□□□ 1.93
NPAS3-206ENST00000548645 FAM53CQ9NYF3 392 aa27.11■■□□□ 1.93
NPAS3-206ENST00000548645 RCOR1Q9UKL0 485 aa27.11■■□□□ 1.93
NPAS3-206ENST00000548645 HSP90B1P14625 803 aaKnown RBP27.1■■□□□ 1.93
NPAS3-206ENST00000548645 GSDMDP57764 484 aa27.1■■□□□ 1.93
NPAS3-206ENST00000548645 TEFQ10587 303 aa27.1■■□□□ 1.93
NPAS3-206ENST00000548645 BCL11BQ9C0K0 894 aaPredicted RBP27.1■■□□□ 1.93
NPAS3-206ENST00000548645 TRMT1Q9NXH9 659 aaKnown RBP27.1■■□□□ 1.93
NPAS3-206ENST00000548645 TLR7Q9NYK1 1049 aaKnown RBP27.1■■□□□ 1.93
NPAS3-206ENST00000548645 KINO60870 393 aaKnown RBP27.1■■□□□ 1.93
NPAS3-206ENST00000548645 CEBPZQ03701 1054 aaKnown RBP27.1■■□□□ 1.93
NPAS3-206ENST00000548645 FBXO38Q6PIJ6 1188 aa27.1■■□□□ 1.93
NPAS3-206ENST00000548645 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.1■■□□□ 1.93
NPAS3-206ENST00000548645 V9GYY5 206 aaPredicted RBP27.1■■□□□ 1.93
NPAS3-206ENST00000548645 KDM3BQ7LBC6 1761 aa27.09■■□□□ 1.93
NPAS3-206ENST00000548645 CCDC66A2RUB6 948 aa27.09■■□□□ 1.93
NPAS3-206ENST00000548645 BTBD11A6QL63 1104 aa27.09■■□□□ 1.93
NPAS3-206ENST00000548645 NUTM2GQ5VZR2 741 aa27.09■■□□□ 1.93
NPAS3-206ENST00000548645 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.09■■□□□ 1.93
NPAS3-206ENST00000548645 ELF2Q15723 593 aa27.09■■□□□ 1.93
NPAS3-206ENST00000548645 CWF19L2Q2TBE0 894 aaKnown RBP27.09■■□□□ 1.93
NPAS3-206ENST00000548645 DHX40Q8IX18 779 aaKnown RBP27.09■■□□□ 1.93
NPAS3-206ENST00000548645 Q6ZUG5 572 aa27.08■■□□□ 1.93
NPAS3-206ENST00000548645 CEP57L1Q8IYX8 460 aa27.08■■□□□ 1.93
NPAS3-206ENST00000548645 LLPHQ9BRT6 129 aaKnown RBP27.08■■□□□ 1.93
NPAS3-206ENST00000548645 GRM8O00222 908 aa27.07■■□□□ 1.92
NPAS3-206ENST00000548645 NAA16Q6N069 864 aaPredicted RBP27.07■■□□□ 1.92
NPAS3-206ENST00000548645 SUCLG2Q96I99 432 aa27.07■■□□□ 1.92
NPAS3-206ENST00000548645 NAT10Q9H0A0 1025 aaKnown RBP27.07■■□□□ 1.92
NPAS3-206ENST00000548645 UBR1Q8IWV7 1749 aa27.07■■□□□ 1.92
NPAS3-206ENST00000548645 ADD1P35611 737 aaKnown RBP27.07■■□□□ 1.92
NPAS3-206ENST00000548645 FAM193AP78312 1265 aa27.07■■□□□ 1.92
NPAS3-206ENST00000548645 LINS1Q8NG48 757 aa27.06■■□□□ 1.92
NPAS3-206ENST00000548645 SMARCC2Q8TAQ2 1214 aa27.06■■□□□ 1.92
NPAS3-206ENST00000548645 BICC1Q9H694 974 aaKnown RBP27.06■■□□□ 1.92
NPAS3-206ENST00000548645 ATL3Q6DD88 541 aa27.06■■□□□ 1.92
NPAS3-206ENST00000548645 FAM160A1Q05DH4 1040 aa27.06■■□□□ 1.92
NPAS3-206ENST00000548645 SNW1Q13573 536 aaKnown RBP27.06■■□□□ 1.92
NPAS3-206ENST00000548645 GOLPH3LQ9H4A5 285 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms