RNA–Protein interactions for RNA: ENST00000548495.5

RPLP0-211, Transcript of ribosomal protein lateral stalk subunit P0, human

TSL 3

Gene RPLP0, Length 651 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPLP0-211	ENST00000548495	LAMB2	P55268	1798 aa		12.07	□□□□□ -0.48
RPLP0-211	ENST00000548495	KIF13B	Q9NQT8	1826 aa		12.07	□□□□□ -0.48
RPLP0-211	ENST00000548495	MYH3	P11055	1940 aa		12.06	□□□□□ -0.48
RPLP0-211	ENST00000548495	SRGN	P10124	158 aa		12.06	□□□□□ -0.48
RPLP0-211	ENST00000548495	ATP8B2	P98198	1209 aa		12.06	□□□□□ -0.48
RPLP0-211	ENST00000548495	MTX1	Q13505	466 aa		12.06	□□□□□ -0.48
RPLP0-211	ENST00000548495	CCDC152	Q4G0S7	254 aa		12.06	□□□□□ -0.48
RPLP0-211	ENST00000548495	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.06	□□□□□ -0.48
RPLP0-211	ENST00000548495	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.06	□□□□□ -0.48
RPLP0-211	ENST00000548495	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.06	□□□□□ -0.48
RPLP0-211	ENST00000548495	RTL9	Q8NET4	1388 aa		12.05	□□□□□ -0.48
RPLP0-211	ENST00000548495	NEFL	P07196	543 aa		12.05	□□□□□ -0.48
RPLP0-211	ENST00000548495	NPR1	P16066	1061 aa		12.05	□□□□□ -0.48
RPLP0-211	ENST00000548495	DPEP1	P16444	411 aa		12.05	□□□□□ -0.48
RPLP0-211	ENST00000548495	KCNA3	P22001	575 aa		12.05	□□□□□ -0.48
RPLP0-211	ENST00000548495	CHRNA5	P30532	468 aa		12.05	□□□□□ -0.48
RPLP0-211	ENST00000548495	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.05	□□□□□ -0.48
RPLP0-211	ENST00000548495	KLHL34	Q8N239	644 aa		12.05	□□□□□ -0.48
RPLP0-211	ENST00000548495	RPGR	Q92834	1020 aa	Known RBP	12.05	□□□□□ -0.48
RPLP0-211	ENST00000548495	MASTL	Q96GX5	879 aa		12.05	□□□□□ -0.48
RPLP0-211	ENST00000548495	CRAMP1	Q96RY5	1269 aa		12.05	□□□□□ -0.48
RPLP0-211	ENST00000548495	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.05	□□□□□ -0.48
RPLP0-211	ENST00000548495	GREM2	Q9H772	168 aa		12.05	□□□□□ -0.48
RPLP0-211	ENST00000548495		A0A0G2JLW4	131 aa		12.04	□□□□□ -0.48
RPLP0-211	ENST00000548495	ALDH1B1	P30837	517 aa		12.04	□□□□□ -0.48
RPLP0-211	ENST00000548495	FAM161A	Q3B820	660 aa		12.04	□□□□□ -0.48
RPLP0-211	ENST00000548495	STYK1	Q6J9G0	422 aa		12.04	□□□□□ -0.48
RPLP0-211	ENST00000548495	CEP85	Q6P2H3	762 aa		12.04	□□□□□ -0.48
RPLP0-211	ENST00000548495	DDX46	Q7L014	1031 aa	Known RBP	12.04	□□□□□ -0.48
RPLP0-211	ENST00000548495	RBM17	Q96I25	401 aa	Known RBP	12.04	□□□□□ -0.48
RPLP0-211	ENST00000548495	SYT17	Q9BSW7	474 aa		12.04	□□□□□ -0.48
RPLP0-211	ENST00000548495	SEC31B	Q9NQW1	1179 aa		12.04	□□□□□ -0.48
RPLP0-211	ENST00000548495	CHMP3	Q9Y3E7	222 aa		12.04	□□□□□ -0.48
RPLP0-211	ENST00000548495	PCDHB15	Q9Y5E8	787 aa		12.04	□□□□□ -0.48
RPLP0-211	ENST00000548495	ANKRD18B	A2A2Z9	1011 aa		12.03	□□□□□ -0.48
RPLP0-211	ENST00000548495	SRGAP3	O43295	1099 aa		12.03	□□□□□ -0.48
RPLP0-211	ENST00000548495	ITGA6	P23229	1130 aa		12.03	□□□□□ -0.48
RPLP0-211	ENST00000548495	RFX5	P48382	616 aa	Predicted RBP	12.03	□□□□□ -0.48
RPLP0-211	ENST00000548495	IFIT5	Q13325	482 aa	Known RBP	12.03	□□□□□ -0.48
RPLP0-211	ENST00000548495	CCDC57	Q2TAC2	916 aa		12.03	□□□□□ -0.48
RPLP0-211	ENST00000548495	SSH3	Q8TE77	659 aa		12.03	□□□□□ -0.48
RPLP0-211	ENST00000548495	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
RPLP0-211	ENST00000548495	LRP5	O75197	1615 aa		12.02	□□□□□ -0.49
RPLP0-211	ENST00000548495	PNMA6E	A0A0J9YXQ4	647 aa		12.02	□□□□□ -0.49
RPLP0-211	ENST00000548495	BBOX1	O75936	387 aa		12.02	□□□□□ -0.49
RPLP0-211	ENST00000548495	RPS8	P62241	208 aa	Known RBP	12.02	□□□□□ -0.49
RPLP0-211	ENST00000548495	GRAP	Q13588	217 aa		12.02	□□□□□ -0.49
RPLP0-211	ENST00000548495	POLA2	Q14181	598 aa		12.02	□□□□□ -0.49
RPLP0-211	ENST00000548495	SIRT2	Q8IXJ6	389 aa		12.02	□□□□□ -0.49
RPLP0-211	ENST00000548495	NLGN2	Q8NFZ4	835 aa		12.02	□□□□□ -0.49
RPLP0-211	ENST00000548495	GRAPL	Q8TC17	118 aa	Predicted RBP	12.02	□□□□□ -0.49
RPLP0-211	ENST00000548495	CELF1	Q92879	486 aa	Known RBP	12.02	□□□□□ -0.49
RPLP0-211	ENST00000548495	CNKSR1	Q969H4	720 aa		12.02	□□□□□ -0.49
RPLP0-211	ENST00000548495	CDC5L	Q99459	802 aa	Known RBP	12.02	□□□□□ -0.49
RPLP0-211	ENST00000548495	KIAA1551	Q9HCM1	1747 aa		12.02	□□□□□ -0.49
RPLP0-211	ENST00000548495	TAF1	P21675	1872 aa		12.02	□□□□□ -0.49
RPLP0-211	ENST00000548495	COL11A2	P13942	1736 aa	Predicted RBP	12.01	□□□□□ -0.49
RPLP0-211	ENST00000548495	PTPN12	Q05209	780 aa	Known RBP	12.01	□□□□□ -0.49
RPLP0-211	ENST00000548495	ZNF594	Q96JF6	807 aa	Predicted RBP	12.01	□□□□□ -0.49
RPLP0-211	ENST00000548495	COPRS	Q9NQ92	184 aa		12.01	□□□□□ -0.49
RPLP0-211	ENST00000548495	PIM2	Q9P1W9	311 aa		12.01	□□□□□ -0.49
RPLP0-211	ENST00000548495	HMMR	O75330	724 aa		12	□□□□□ -0.49
RPLP0-211	ENST00000548495	TAF7L	Q5H9L4	462 aa		12	□□□□□ -0.49
RPLP0-211	ENST00000548495	ERICH6B	Q5W0A0	696 aa		12	□□□□□ -0.49
RPLP0-211	ENST00000548495	ANKRD18A	Q8IVF6	992 aa		12	□□□□□ -0.49
RPLP0-211	ENST00000548495	TTLL6	Q8N841	843 aa		12	□□□□□ -0.49
RPLP0-211	ENST00000548495	KLHDC4	Q8TBB5	520 aa		12	□□□□□ -0.49
RPLP0-211	ENST00000548495	DLEC1	Q9Y238	1755 aa		12	□□□□□ -0.49
RPLP0-211	ENST00000548495	IGHMBP2	P38935	993 aa	Known RBP	11.99	□□□□□ -0.49
RPLP0-211	ENST00000548495	DALRD3	Q5D0E6	543 aa	Known RBP	11.99	□□□□□ -0.49
RPLP0-211	ENST00000548495	TMC4	Q7Z404	712 aa		11.99	□□□□□ -0.49
RPLP0-211	ENST00000548495	SP8	Q8IXZ3	490 aa		11.99	□□□□□ -0.49
RPLP0-211	ENST00000548495	MPHOSPH8	Q99549	860 aa		11.99	□□□□□ -0.49
RPLP0-211	ENST00000548495	BSDC1	Q9NW68	430 aa	Predicted RBP	11.99	□□□□□ -0.49
RPLP0-211	ENST00000548495	FBXO3	Q9UK99	471 aa		11.99	□□□□□ -0.49
RPLP0-211	ENST00000548495	PA2G4	Q9UQ80	394 aa	Known RBP	11.99	□□□□□ -0.49
RPLP0-211	ENST00000548495	SLX4	Q8IY92	1834 aa		11.98	□□□□□ -0.49
RPLP0-211	ENST00000548495	COL4A1	P02462	1669 aa		11.98	□□□□□ -0.49
RPLP0-211	ENST00000548495	EYA2	O00167	538 aa		11.98	□□□□□ -0.49
RPLP0-211	ENST00000548495	PPEF1	O14829	653 aa	Predicted RBP	11.98	□□□□□ -0.49
RPLP0-211	ENST00000548495	HDAC1	Q13547	482 aa	Predicted RBP	11.98	□□□□□ -0.49
RPLP0-211	ENST00000548495	PRPF40B	Q6NWY9	871 aa	Known RBP	11.98	□□□□□ -0.49
RPLP0-211	ENST00000548495	LDHAL6A	Q6ZMR3	332 aa		11.98	□□□□□ -0.49
RPLP0-211	ENST00000548495	C7orf43	Q8WVR3	580 aa		11.98	□□□□□ -0.49
RPLP0-211	ENST00000548495	PUS3	Q9BZE2	481 aa	Known RBP	11.98	□□□□□ -0.49
RPLP0-211	ENST00000548495	NOP58	Q9Y2X3	529 aa	Known RBP	11.98	□□□□□ -0.49
RPLP0-211	ENST00000548495	ATP6V0A2	Q9Y487	856 aa		11.98	□□□□□ -0.49
RPLP0-211	ENST00000548495	RIPOR2	Q9Y4F9	1068 aa		11.98	□□□□□ -0.49
RPLP0-211	ENST00000548495	SURF6	O75683	361 aa	Known RBP	11.97	□□□□□ -0.49
RPLP0-211	ENST00000548495	CIAO1	O76071	339 aa		11.97	□□□□□ -0.49
RPLP0-211	ENST00000548495	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
RPLP0-211	ENST00000548495	LRRC24	Q50LG9	513 aa		11.97	□□□□□ -0.49
RPLP0-211	ENST00000548495	CC2D2B	Q6DHV5	1058 aa		11.97	□□□□□ -0.49
RPLP0-211	ENST00000548495	ATG9A	Q7Z3C6	839 aa		11.97	□□□□□ -0.49
RPLP0-211	ENST00000548495	RWDD1	Q9H446	243 aa	Predicted RBP	11.97	□□□□□ -0.49
RPLP0-211	ENST00000548495	DCTPP1	Q9H773	170 aa		11.97	□□□□□ -0.49
RPLP0-211	ENST00000548495	CNNM1	Q9NRU3	951 aa		11.97	□□□□□ -0.49
RPLP0-211	ENST00000548495	BRCA1	P38398	1863 aa	Known RBP	11.97	□□□□□ -0.49
RPLP0-211	ENST00000548495	IL15	P40933	162 aa	Predicted RBP	11.96	□□□□□ -0.49
RPLP0-211	ENST00000548495	SIL1	Q9H173	461 aa		11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms