RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 STRCQ7RTU9 1775 aa8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 DOCK2Q92608 1830 aa8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 COL22A1Q8NFW1 1626 aaPredicted RBP8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 PHF14O94880 888 aa8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 PDIA4P13667 645 aaKnown RBP8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 G3BP1Q13283 466 aaKnown RBP eCLIP8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 COPS6Q7L5N1 327 aa8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 DCAF5Q96JK2 942 aa8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 HAUS7Q99871 368 aa8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 HMG20BQ9P0W2 317 aa8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 USP16Q9Y5T5 823 aa8.55□□□□□ -1.04
PDZRN4-204ENST00000548316 SH3TC1Q8TE82 1336 aa8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 MYO5AQ9Y4I1 1855 aaKnown RBP8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 OS9Q13438 667 aaPredicted RBP8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 IFNL2Q8IZJ0 200 aa8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 KLHDC4Q8TBB5 520 aa8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 MYD88Q99836 296 aa8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 RREB1Q92766 1687 aa8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 NBPF26B4DH59 902 aa8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 SNRPA1P09661 255 aaKnown RBP8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 NKX1-1Q15270 411 aaPredicted RBP8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 NBPF14Q5TI25 921 aa8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 NBPF10Q6P3W6 841 aaKnown RBP8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 ATG9AQ7Z3C6 839 aa8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 TTC6Q86TZ1 520 aa8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 NBPF15Q8N660 670 aa8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 NFATC2IPQ8NCF5 419 aa8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 AGXT2Q9BYV1 514 aa8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 GPR108Q9NPR9 543 aa8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 SPATA31A3Q5VYP0 1347 aa8.54□□□□□ -1.04
PDZRN4-204ENST00000548316 CICQ96RK0 1608 aaPredicted RBP8.53□□□□□ -1.04
PDZRN4-204ENST00000548316 TATP17735 454 aaPredicted RBP8.53□□□□□ -1.04
PDZRN4-204ENST00000548316 DNM1Q05193 864 aaKnown RBP8.53□□□□□ -1.04
PDZRN4-204ENST00000548316 NECAB1Q8N987 351 aa8.53□□□□□ -1.04
PDZRN4-204ENST00000548316 SMARCC2Q8TAQ2 1214 aa8.53□□□□□ -1.04
PDZRN4-204ENST00000548316 LRP6O75581 1613 aa8.53□□□□□ -1.04
PDZRN4-204ENST00000548316 ANKRD13DQ6ZTN6 518 aa8.53□□□□□ -1.04
PDZRN4-204ENST00000548316 CDC37L1Q7L3B6 337 aa8.53□□□□□ -1.04
PDZRN4-204ENST00000548316 PLBD2Q8NHP8 589 aa8.53□□□□□ -1.04
PDZRN4-204ENST00000548316 ANP32BQ92688 251 aaKnown RBP8.53□□□□□ -1.04
PDZRN4-204ENST00000548316 SPTLC3Q9NUV7 552 aa8.53□□□□□ -1.04
PDZRN4-204ENST00000548316 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.53□□□□□ -1.04
PDZRN4-204ENST00000548316 COL5A2P05997 1499 aaPredicted RBP8.53□□□□□ -1.04
PDZRN4-204ENST00000548316 PSMA5P28066 241 aa8.52□□□□□ -1.04
PDZRN4-204ENST00000548316 TFCP2Q12800 502 aa8.52□□□□□ -1.04
PDZRN4-204ENST00000548316 RESTQ13127 1097 aa8.52□□□□□ -1.04
PDZRN4-204ENST00000548316 RIC3Q7Z5B4 369 aa8.52□□□□□ -1.04
PDZRN4-204ENST00000548316 PROSER2Q86WR7 435 aaPredicted RBP8.52□□□□□ -1.04
PDZRN4-204ENST00000548316 EDC3Q96F86 508 aaKnown RBP8.52□□□□□ -1.04
PDZRN4-204ENST00000548316 BOLA2Q9H3K6 86 aa8.52□□□□□ -1.04
PDZRN4-204ENST00000548316 A0A1B0GUL6 1792 aa8.52□□□□□ -1.05
PDZRN4-204ENST00000548316 ZBTB7CA1YPR0 619 aa8.52□□□□□ -1.05
PDZRN4-204ENST00000548316 RRP9O43818 475 aaKnown RBP8.52□□□□□ -1.05
PDZRN4-204ENST00000548316 STOX1Q6ZVD7 989 aa8.52□□□□□ -1.05
PDZRN4-204ENST00000548316 GTF3C6Q969F1 213 aa8.52□□□□□ -1.05
PDZRN4-204ENST00000548316 ATP6V1DQ9Y5K8 247 aa8.52□□□□□ -1.05
PDZRN4-204ENST00000548316 SALL1Q9NSC2 1324 aa8.52□□□□□ -1.05
PDZRN4-204ENST00000548316 KDM4AO75164 1064 aa8.52□□□□□ -1.05
PDZRN4-204ENST00000548316 ADD1P35611 737 aaKnown RBP8.52□□□□□ -1.05
PDZRN4-204ENST00000548316 AIMP1Q12904 312 aaKnown RBP8.52□□□□□ -1.05
PDZRN4-204ENST00000548316 ANKRD1Q15327 319 aa8.52□□□□□ -1.05
PDZRN4-204ENST00000548316 FBXL16Q8N461 479 aa8.52□□□□□ -1.05
PDZRN4-204ENST00000548316 RNF214Q8ND24 703 aa8.52□□□□□ -1.05
PDZRN4-204ENST00000548316 UBE2Q2Q8WVN8 375 aa8.52□□□□□ -1.05
PDZRN4-204ENST00000548316 FMNL2Q96PY5 1086 aa8.52□□□□□ -1.05
PDZRN4-204ENST00000548316 LAMB2P55268 1798 aa8.52□□□□□ -1.05
PDZRN4-204ENST00000548316 CASZ1Q86V15 1759 aa8.52□□□□□ -1.05
PDZRN4-204ENST00000548316 CHD4Q14839 1912 aa8.51□□□□□ -1.05
PDZRN4-204ENST00000548316 NUP98P52948 1817 aa8.51□□□□□ -1.05
PDZRN4-204ENST00000548316 CHGBP05060 677 aa8.51□□□□□ -1.05
PDZRN4-204ENST00000548316 ZC3H6P61129 1189 aaKnown RBP8.51□□□□□ -1.05
PDZRN4-204ENST00000548316 EXOSC10Q01780 885 aaKnown RBP8.51□□□□□ -1.05
PDZRN4-204ENST00000548316 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.51□□□□□ -1.05
PDZRN4-204ENST00000548316 RAPGEF4Q8WZA2 1011 aa8.51□□□□□ -1.05
PDZRN4-204ENST00000548316 ZKSCAN1P17029 563 aaPredicted RBP8.51□□□□□ -1.05
PDZRN4-204ENST00000548316 MSNP26038 577 aaKnown RBP8.51□□□□□ -1.05
PDZRN4-204ENST00000548316 BLOC1S2Q6QNY1 142 aa8.51□□□□□ -1.05
PDZRN4-204ENST00000548316 DDX54Q8TDD1 881 aaKnown RBP8.51□□□□□ -1.05
PDZRN4-204ENST00000548316 DBNDD2Q9BQY9 259 aa8.51□□□□□ -1.05
PDZRN4-204ENST00000548316 FSD1Q9BTV5 496 aa8.51□□□□□ -1.05
PDZRN4-204ENST00000548316 DTNBO60941 627 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 MYL6BP14649 208 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 LIG1P18858 919 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 NEXNQ0ZGT2 675 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 CSPP1Q1MSJ5 1256 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 SIL1Q9H173 461 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 U3KPZ7 1027 aaPredicted RBP8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 BCORQ6W2J9 1755 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 PHLPP1O60346 1717 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 TIAM2Q8IVF5 1701 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 FOXP2O15409 715 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 FIBPO43427 364 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 CTDNEP1O95476 244 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 CYP21A2P08686 494 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 HCLS1P14317 486 aaPredicted RBP8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 EVCP57679 992 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 KRT32Q14532 448 aa8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 FOXD4L6Q3SYB3 417 aaPredicted RBP8.5□□□□□ -1.05
PDZRN4-204ENST00000548316 ZMYM1Q5SVZ6 1142 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms