RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 ZNF34Q8IZ26 560 aa25.32■■□□□ 1.64
RITA1-201ENST00000548278 FSD1Q9BTV5 496 aa25.32■■□□□ 1.64
RITA1-201ENST00000548278 SNRKQ9NRH2 765 aa25.32■■□□□ 1.64
RITA1-201ENST00000548278 FBXO3Q9UK99 471 aa25.32■■□□□ 1.64
RITA1-201ENST00000548278 NMIQ13287 307 aaPredicted RBP25.32■■□□□ 1.64
RITA1-201ENST00000548278 FAM227BQ96M60 508 aa25.32■■□□□ 1.64
RITA1-201ENST00000548278 ZNF609O15014 1411 aa25.31■■□□□ 1.64
RITA1-201ENST00000548278 HAUS7Q99871 368 aa25.31■■□□□ 1.64
RITA1-201ENST00000548278 EDC3Q96F86 508 aaKnown RBP25.3■■□□□ 1.64
RITA1-201ENST00000548278 UBN2Q6ZU65 1347 aa25.3■■□□□ 1.64
RITA1-201ENST00000548278 MYH3P11055 1940 aa25.3■■□□□ 1.64
RITA1-201ENST00000548278 MCM2P49736 904 aa25.3■■□□□ 1.64
RITA1-201ENST00000548278 PTH1RQ03431 593 aa25.3■■□□□ 1.64
RITA1-201ENST00000548278 SNX14Q9Y5W7 946 aa25.3■■□□□ 1.64
RITA1-201ENST00000548278 TIMM10P62072 90 aa25.29■■□□□ 1.64
RITA1-201ENST00000548278 CCDC85AQ96PX6 553 aaPredicted RBP25.29■■□□□ 1.64
RITA1-201ENST00000548278 TRMT112Q9UI30 125 aaKnown RBP25.29■■□□□ 1.64
RITA1-201ENST00000548278 IFIT5Q13325 482 aaKnown RBP25.28■■□□□ 1.64
RITA1-201ENST00000548278 RAB3GAP1Q15042 981 aa25.28■■□□□ 1.64
RITA1-201ENST00000548278 TTLL11Q8NHH1 800 aa25.28■■□□□ 1.64
RITA1-201ENST00000548278 NEUROD6Q96NK8 337 aa25.28■■□□□ 1.64
RITA1-201ENST00000548278 A0A0D9SFI3 127 aa25.28■■□□□ 1.64
RITA1-201ENST00000548278 IRS4O14654 1257 aaPredicted RBP25.28■■□□□ 1.64
RITA1-201ENST00000548278 DEKP35659 375 aaKnown RBP25.28■■□□□ 1.64
RITA1-201ENST00000548278 CTSWP56202 376 aa25.28■■□□□ 1.64
RITA1-201ENST00000548278 RASEFQ8IZ41 740 aa25.28■■□□□ 1.64
RITA1-201ENST00000548278 IL27Q8NEV9 243 aa25.28■■□□□ 1.64
RITA1-201ENST00000548278 ZNF831Q5JPB2 1677 aa25.28■■□□□ 1.64
RITA1-201ENST00000548278 RFX7Q2KHR2 1363 aa25.28■■□□□ 1.64
RITA1-201ENST00000548278 COL5A3P25940 1745 aaPredicted RBP25.27■■□□□ 1.64
RITA1-201ENST00000548278 CEP126Q9P2H0 1117 aa25.27■■□□□ 1.64
RITA1-201ENST00000548278 USP21Q9UK80 565 aa25.27■■□□□ 1.64
RITA1-201ENST00000548278 CCDC171Q6TFL3 1326 aa25.27■■□□□ 1.64
RITA1-201ENST00000548278 MCM4P33991 863 aa25.27■■□□□ 1.64
RITA1-201ENST00000548278 NDUFB9Q9Y6M9 179 aa25.27■■□□□ 1.64
RITA1-201ENST00000548278 MED23Q9ULK4 1368 aa25.26■■□□□ 1.63
RITA1-201ENST00000548278 A0A1B0GUL7 405 aa25.26■■□□□ 1.63
RITA1-201ENST00000548278 CAMTA2O94983 1202 aa25.26■■□□□ 1.63
RITA1-201ENST00000548278 KCNB2Q92953 911 aa25.26■■□□□ 1.63
RITA1-201ENST00000548278 UPF3BQ9BZI7 483 aaKnown RBP25.26■■□□□ 1.63
RITA1-201ENST00000548278 TMX3Q96JJ7 454 aa25.25■■□□□ 1.63
RITA1-201ENST00000548278 DNAJC2Q99543 621 aaKnown RBP25.25■■□□□ 1.63
RITA1-201ENST00000548278 GREM2Q9H772 168 aa25.25■■□□□ 1.63
RITA1-201ENST00000548278 TAF7LQ5H9L4 462 aa25.25■■□□□ 1.63
RITA1-201ENST00000548278 TNPO1Q92973 898 aaKnown RBP25.25■■□□□ 1.63
RITA1-201ENST00000548278 THSD7AQ9UPZ6 1657 aa25.24■■□□□ 1.63
RITA1-201ENST00000548278 PDE8AO60658 829 aa25.24■■□□□ 1.63
RITA1-201ENST00000548278 ITGA6P23229 1130 aa25.24■■□□□ 1.63
RITA1-201ENST00000548278 NECTIN1Q15223 517 aa25.24■■□□□ 1.63
RITA1-201ENST00000548278 MAP4K1Q92918 833 aa25.24■■□□□ 1.63
RITA1-201ENST00000548278 CWC22Q9HCG8 908 aaKnown RBP25.24■■□□□ 1.63
RITA1-201ENST00000548278 CERKQ8TCT0 537 aa25.23■■□□□ 1.63
RITA1-201ENST00000548278 SUSD4Q5VX71 490 aa25.22■■□□□ 1.63
RITA1-201ENST00000548278 AKAP2Q9Y2D5 859 aa25.22■■□□□ 1.63
RITA1-201ENST00000548278 RIPOR2Q9Y4F9 1068 aa25.22■■□□□ 1.63
RITA1-201ENST00000548278 RIC1Q4ADV7 1423 aa25.22■■□□□ 1.63
RITA1-201ENST00000548278 PRPF40BQ6NWY9 871 aaKnown RBP25.22■■□□□ 1.63
RITA1-201ENST00000548278 DDX46Q7L014 1031 aaKnown RBP25.22■■□□□ 1.63
RITA1-201ENST00000548278 ZGPATQ8N5A5 531 aaKnown RBP25.22■■□□□ 1.63
RITA1-201ENST00000548278 AK7Q96M32 723 aa25.22■■□□□ 1.63
RITA1-201ENST00000548278 ANKRD18BA2A2Z9 1011 aa25.21■■□□□ 1.63
RITA1-201ENST00000548278 CUL4AQ13619 759 aa25.21■■□□□ 1.63
RITA1-201ENST00000548278 KBTBD3Q8NAB2 608 aa25.21■■□□□ 1.63
RITA1-201ENST00000548278 RBM8AQ9Y5S9 174 aaKnown RBP25.21■■□□□ 1.63
RITA1-201ENST00000548278 ZNF589Q86UQ0 364 aaPredicted RBP25.21■■□□□ 1.63
RITA1-201ENST00000548278 LINC00116Q8NCU8 138 aa25.21■■□□□ 1.63
RITA1-201ENST00000548278 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.21■■□□□ 1.63
RITA1-201ENST00000548278 TTC14Q96N46 770 aa25.21■■□□□ 1.63
RITA1-201ENST00000548278 PTF1AQ7RTS3 328 aa25.2■■□□□ 1.62
RITA1-201ENST00000548278 PAG1Q9NWQ8 432 aa25.2■■□□□ 1.62
RITA1-201ENST00000548278 PARP10Q53GL7 1025 aa25.19■■□□□ 1.62
RITA1-201ENST00000548278 SH3TC1Q8TE82 1336 aa25.19■■□□□ 1.62
RITA1-201ENST00000548278 LDHAL6AQ6ZMR3 332 aa25.19■■□□□ 1.62
RITA1-201ENST00000548278 TICAM2Q86XR7 235 aa25.19■■□□□ 1.62
RITA1-201ENST00000548278 XAGE2Q96GT9 111 aa25.19■■□□□ 1.62
RITA1-201ENST00000548278 UTP14AQ9BVJ6 771 aaKnown RBP25.19■■□□□ 1.62
RITA1-201ENST00000548278 SPEF2Q9C093 1822 aa25.18■■□□□ 1.62
RITA1-201ENST00000548278 GOLIM4O00461 696 aa25.18■■□□□ 1.62
RITA1-201ENST00000548278 SSFA2P28290 1259 aa25.18■■□□□ 1.62
RITA1-201ENST00000548278 ADORA1P30542 326 aa25.18■■□□□ 1.62
RITA1-201ENST00000548278 CREB3L3Q68CJ9 461 aa25.18■■□□□ 1.62
RITA1-201ENST00000548278 BCORQ6W2J9 1755 aa25.18■■□□□ 1.62
RITA1-201ENST00000548278 TAF5LO75529 589 aa25.17■■□□□ 1.62
RITA1-201ENST00000548278 CHGBP05060 677 aa25.17■■□□□ 1.62
RITA1-201ENST00000548278 IFIT1P09914 478 aaKnown RBP25.17■■□□□ 1.62
RITA1-201ENST00000548278 TM6SF1Q9BZW5 370 aa25.17■■□□□ 1.62
RITA1-201ENST00000548278 CYP2E1P05181 493 aaPredicted RBP25.17■■□□□ 1.62
RITA1-201ENST00000548278 NUCB2P80303 420 aa25.17■■□□□ 1.62
RITA1-201ENST00000548278 GSE1Q14687 1217 aa25.17■■□□□ 1.62
RITA1-201ENST00000548278 BTAF1O14981 1849 aa25.16■■□□□ 1.62
RITA1-201ENST00000548278 ADCK5Q3MIX3 580 aa25.16■■□□□ 1.62
RITA1-201ENST00000548278 METTL24Q5JXM2 366 aa25.16■■□□□ 1.62
RITA1-201ENST00000548278 NOL8Q76FK4 1167 aaKnown RBP25.16■■□□□ 1.62
RITA1-201ENST00000548278 NHSQ6T4R5 1651 aa25.16■■□□□ 1.62
RITA1-201ENST00000548278 LRP5O75197 1615 aa25.16■■□□□ 1.62
RITA1-201ENST00000548278 SLC27A2O14975 620 aa25.16■■□□□ 1.62
RITA1-201ENST00000548278 HCLS1P14317 486 aaPredicted RBP25.16■■□□□ 1.62
RITA1-201ENST00000548278 CASTP20810 708 aaKnown RBP25.16■■□□□ 1.62
RITA1-201ENST00000548278 KCNJ4P48050 445 aa25.16■■□□□ 1.62
RITA1-201ENST00000548278 VGLL2Q8N8G2 317 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms