RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 COPS6Q7L5N1 327 aa26.27■■□□□ 1.8
GATC-202ENST00000548171 NLRP10Q86W26 655 aa26.27■■□□□ 1.8
GATC-202ENST00000548171 ZC3H15Q8WU90 426 aaKnown RBP26.27■■□□□ 1.8
GATC-202ENST00000548171 PGAP2Q9UHJ9 254 aa26.27■■□□□ 1.8
GATC-202ENST00000548171 LRRC37AA6NMS7 1700 aa26.26■■□□□ 1.79
GATC-202ENST00000548171 SH3TC1Q8TE82 1336 aa26.26■■□□□ 1.79
GATC-202ENST00000548171 ANXA1P04083 346 aa26.26■■□□□ 1.79
GATC-202ENST00000548171 GRM1Q13255 1194 aa26.26■■□□□ 1.79
GATC-202ENST00000548171 TNIP1Q15025 636 aa26.26■■□□□ 1.79
GATC-202ENST00000548171 TMC4Q7Z404 712 aa26.26■■□□□ 1.79
GATC-202ENST00000548171 HHIPL1Q96JK4 782 aa26.26■■□□□ 1.79
GATC-202ENST00000548171 TCIRG1Q13488 830 aa26.25■■□□□ 1.79
GATC-202ENST00000548171 TRMT112Q9UI30 125 aaKnown RBP26.25■■□□□ 1.79
GATC-202ENST00000548171 HCLS1P14317 486 aaPredicted RBP26.24■■□□□ 1.79
GATC-202ENST00000548171 GRAPQ13588 217 aa26.24■■□□□ 1.79
GATC-202ENST00000548171 SAPCD2Q86UD0 394 aa26.24■■□□□ 1.79
GATC-202ENST00000548171 GRAPLQ8TC17 118 aaPredicted RBP26.24■■□□□ 1.79
GATC-202ENST00000548171 XAGE3Q8WTP9 111 aa26.24■■□□□ 1.79
GATC-202ENST00000548171 BCL2L13Q9BXK5 485 aa26.24■■□□□ 1.79
GATC-202ENST00000548171 DDX60Q8IY21 1712 aaKnown RBP26.23■■□□□ 1.79
GATC-202ENST00000548171 CELF2O95319 508 aaKnown RBP26.23■■□□□ 1.79
GATC-202ENST00000548171 AIMP1Q12904 312 aaKnown RBP26.23■■□□□ 1.79
GATC-202ENST00000548171 CA12O43570 354 aa26.22■■□□□ 1.79
GATC-202ENST00000548171 TMPOP42166 694 aaKnown RBP26.22■■□□□ 1.79
GATC-202ENST00000548171 GLIS2Q9BZE0 524 aaPredicted RBP26.21■■□□□ 1.79
GATC-202ENST00000548171 DUOX1Q9NRD9 1551 aa26.2■■□□□ 1.79
GATC-202ENST00000548171 RAD17O75943 681 aa26.2■■□□□ 1.78
GATC-202ENST00000548171 RALBP1Q15311 655 aa26.2■■□□□ 1.78
GATC-202ENST00000548171 CDC37L1Q7L3B6 337 aa26.2■■□□□ 1.78
GATC-202ENST00000548171 NECTIN2Q92692 538 aa26.2■■□□□ 1.78
GATC-202ENST00000548171 AOC2O75106 756 aa26.19■■□□□ 1.78
GATC-202ENST00000548171 H7C1D1 291 aa26.18■■□□□ 1.78
GATC-202ENST00000548171 CNOT7Q9UIV1 285 aaKnown RBP26.18■■□□□ 1.78
GATC-202ENST00000548171 HIRAP54198 1017 aaPredicted RBP26.17■■□□□ 1.78
GATC-202ENST00000548171 BRPF1P55201 1214 aaPredicted RBP26.17■■□□□ 1.78
GATC-202ENST00000548171 YDJCA8MPS7 323 aa26.16■■□□□ 1.78
GATC-202ENST00000548171 CHL1O00533 1208 aa26.16■■□□□ 1.78
GATC-202ENST00000548171 PLBD2Q8NHP8 589 aa26.16■■□□□ 1.78
GATC-202ENST00000548171 DPF2Q92785 391 aa26.16■■□□□ 1.78
GATC-202ENST00000548171 POLR2AP24928 1970 aaKnown RBP26.16■■□□□ 1.78
GATC-202ENST00000548171 CASP8AP2Q9UKL3 1982 aa26.16■■□□□ 1.78
GATC-202ENST00000548171 HOXB7P09629 217 aa26.15■■□□□ 1.78
GATC-202ENST00000548171 TRPM4Q8TD43 1214 aa26.15■■□□□ 1.78
GATC-202ENST00000548171 ZNF408Q9H9D4 720 aa26.15■■□□□ 1.78
GATC-202ENST00000548171 CHPF2Q9P2E5 772 aa26.15■■□□□ 1.78
GATC-202ENST00000548171 WASHC4Q2M389 1173 aa26.14■■□□□ 1.78
GATC-202ENST00000548171 MICALL2Q8IY33 904 aa26.14■■□□□ 1.78
GATC-202ENST00000548171 SF3B3Q15393 1217 aaKnown RBP26.13■■□□□ 1.77
GATC-202ENST00000548171 ANKRD13DQ6ZTN6 518 aa26.13■■□□□ 1.77
GATC-202ENST00000548171 DBF4Q9UBU7 674 aaPredicted RBP26.13■■□□□ 1.77
GATC-202ENST00000548171 TSKSQ9UJT2 592 aa26.13■■□□□ 1.77
GATC-202ENST00000548171 NSFL1CQ9UNZ2 370 aaKnown RBP26.13■■□□□ 1.77
GATC-202ENST00000548171 CCDC85CA6NKD9 419 aa26.12■■□□□ 1.77
GATC-202ENST00000548171 NOGQ13253 232 aa26.12■■□□□ 1.77
GATC-202ENST00000548171 KRT24Q2M2I5 525 aa26.12■■□□□ 1.77
GATC-202ENST00000548171 FAM161AQ3B820 660 aa26.12■■□□□ 1.77
GATC-202ENST00000548171 HDGFL1Q5TGJ6 251 aa26.12■■□□□ 1.77
GATC-202ENST00000548171 ISCA1Q9BUE6 129 aa26.12■■□□□ 1.77
GATC-202ENST00000548171 RPS12P25398 132 aaKnown RBP26.11■■□□□ 1.77
GATC-202ENST00000548171 NEUROD2Q15784 382 aa26.11■■□□□ 1.77
GATC-202ENST00000548171 LAS1LQ9Y4W2 734 aaKnown RBP26.1■■□□□ 1.77
GATC-202ENST00000548171 SHTN1A0MZ66 631 aa26.09■■□□□ 1.77
GATC-202ENST00000548171 PSMD14O00487 310 aa26.09■■□□□ 1.77
GATC-202ENST00000548171 RGS19P49795 217 aa26.09■■□□□ 1.77
GATC-202ENST00000548171 USP48Q86UV5 1035 aa26.09■■□□□ 1.77
GATC-202ENST00000548171 CELF1Q92879 486 aaKnown RBP26.09■■□□□ 1.77
GATC-202ENST00000548171 FAM89AQ96GI7 184 aa26.09■■□□□ 1.77
GATC-202ENST00000548171 EYA3Q99504 573 aa26.09■■□□□ 1.77
GATC-202ENST00000548171 DBNDD1Q9H9R9 158 aa26.09■■□□□ 1.77
GATC-202ENST00000548171 ZBTB12Q9Y330 459 aaPredicted RBP26.09■■□□□ 1.77
GATC-202ENST00000548171 C6orf229H3BNL8 230 aa26.08■■□□□ 1.77
GATC-202ENST00000548171 HUNKP57058 714 aa26.08■■□□□ 1.77
GATC-202ENST00000548171 MLLT1Q03111 559 aaPredicted RBP26.08■■□□□ 1.77
GATC-202ENST00000548171 CCDC146Q8IYE0 955 aa26.08■■□□□ 1.77
GATC-202ENST00000548171 RUNDC1Q96C34 613 aa26.08■■□□□ 1.77
GATC-202ENST00000548171 HYPKQ9NX55 129 aa26.08■■□□□ 1.77
GATC-202ENST00000548171 TRIM35Q9UPQ4 493 aa26.08■■□□□ 1.77
GATC-202ENST00000548171 TRIM28Q13263 835 aaKnown RBP26.07■■□□□ 1.76
GATC-202ENST00000548171 SAMD7Q7Z3H4 446 aa26.07■■□□□ 1.76
GATC-202ENST00000548171 POLLQ9UGP5 575 aa26.07■■□□□ 1.76
GATC-202ENST00000548171 ATP5J2-PTCD1G3V325 749 aa26.06■■□□□ 1.76
GATC-202ENST00000548171 KRT26Q7Z3Y9 468 aa26.06■■□□□ 1.76
GATC-202ENST00000548171 ZNF428Q96B54 188 aa26.06■■□□□ 1.76
GATC-202ENST00000548171 MYBBP1AQ9BQG0 1328 aaKnown RBP26.06■■□□□ 1.76
GATC-202ENST00000548171 RIMBP2O15034 1052 aa26.05■■□□□ 1.76
GATC-202ENST00000548171 ECE2O60344 883 aa26.05■■□□□ 1.76
GATC-202ENST00000548171 GPSM2P81274 684 aa26.05■■□□□ 1.76
GATC-202ENST00000548171 DCPSQ96C86 337 aaKnown RBP26.05■■□□□ 1.76
GATC-202ENST00000548171 MCOLN1Q9GZU1 580 aa26.05■■□□□ 1.76
GATC-202ENST00000548171 SCN9AQ15858 1988 aa26.05■■□□□ 1.76
GATC-202ENST00000548171 AKAP11Q9UKA4 1901 aa26.04■■□□□ 1.76
GATC-202ENST00000548171 COL4A1P02462 1669 aa26.04■■□□□ 1.76
GATC-202ENST00000548171 HSP90B1P14625 803 aaKnown RBP26.04■■□□□ 1.76
GATC-202ENST00000548171 RPS8P62241 208 aaKnown RBP26.04■■□□□ 1.76
GATC-202ENST00000548171 TBC1D10BQ4KMP7 808 aaPredicted RBP26.04■■□□□ 1.76
GATC-202ENST00000548171 PSME4Q14997 1843 aa26.03■■□□□ 1.76
GATC-202ENST00000548171 IRS4O14654 1257 aaPredicted RBP26.03■■□□□ 1.76
GATC-202ENST00000548171 WDR43Q15061 677 aaKnown RBP eCLIP26.03■■□□□ 1.76
GATC-202ENST00000548171 RGMBQ6NW40 437 aa26.03■■□□□ 1.76
GATC-202ENST00000548171 C2orf69Q8N8R5 385 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms