RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 DDRGK1Q96HY6 314 aa13.72□□□□□ -0.21
SCN8A-205ENST00000548086 LAMB2P55268 1798 aa13.72□□□□□ -0.21
SCN8A-205ENST00000548086 TNRC6CQ9HCJ0 1690 aaKnown RBP13.72□□□□□ -0.21
SCN8A-205ENST00000548086 POLRMTO00411 1230 aaKnown RBP13.71□□□□□ -0.21
SCN8A-205ENST00000548086 NPHP1O15259 732 aa13.71□□□□□ -0.21
SCN8A-205ENST00000548086 CTSWP56202 376 aa13.71□□□□□ -0.21
SCN8A-205ENST00000548086 R3HDM1Q15032 1099 aaKnown RBP13.71□□□□□ -0.21
SCN8A-205ENST00000548086 HDAC5Q9UQL6 1122 aa13.71□□□□□ -0.21
SCN8A-205ENST00000548086 PDE8AO60658 829 aa13.71□□□□□ -0.22
SCN8A-205ENST00000548086 HMMRO75330 724 aa13.71□□□□□ -0.22
SCN8A-205ENST00000548086 SERPINB2P05120 415 aa13.71□□□□□ -0.22
SCN8A-205ENST00000548086 MMP10P09238 476 aa13.71□□□□□ -0.22
SCN8A-205ENST00000548086 SMC5Q8IY18 1101 aa13.71□□□□□ -0.22
SCN8A-205ENST00000548086 NLGN1Q8N2Q7 840 aa13.71□□□□□ -0.22
SCN8A-205ENST00000548086 TTLL11Q8NHH1 800 aa13.71□□□□□ -0.22
SCN8A-205ENST00000548086 ZNF594Q96JF6 807 aaPredicted RBP13.71□□□□□ -0.22
SCN8A-205ENST00000548086 PLA2G12BQ9BX93 195 aa13.71□□□□□ -0.22
SCN8A-205ENST00000548086 SIL1Q9H173 461 aa13.71□□□□□ -0.22
SCN8A-205ENST00000548086 GREM2Q9H772 168 aa13.71□□□□□ -0.22
SCN8A-205ENST00000548086 COL4A1P02462 1669 aa13.7□□□□□ -0.22
SCN8A-205ENST00000548086 PSDA5PKW4 1024 aaPredicted RBP13.7□□□□□ -0.22
SCN8A-205ENST00000548086 RFX5P48382 616 aaPredicted RBP13.7□□□□□ -0.22
SCN8A-205ENST00000548086 PRR5LQ6MZQ0 368 aa13.7□□□□□ -0.22
SCN8A-205ENST00000548086 TPTE2Q6XPS3 522 aa13.7□□□□□ -0.22
SCN8A-205ENST00000548086 CNBD1Q8NA66 436 aa13.7□□□□□ -0.22
SCN8A-205ENST00000548086 NYXQ9GZU5 481 aa13.7□□□□□ -0.22
SCN8A-205ENST00000548086 DCTPP1Q9H773 170 aa13.7□□□□□ -0.22
SCN8A-205ENST00000548086 SURF6O75683 361 aaKnown RBP13.69□□□□□ -0.22
SCN8A-205ENST00000548086 TAF1P21675 1872 aa13.69□□□□□ -0.22
SCN8A-205ENST00000548086 SMARCA5O60264 1052 aaPredicted RBP13.69□□□□□ -0.22
SCN8A-205ENST00000548086 CSF1RP07333 972 aa13.69□□□□□ -0.22
SCN8A-205ENST00000548086 PDZRN3Q9UPQ7 1066 aa13.69□□□□□ -0.22
SCN8A-205ENST00000548086 ZBTB7AO95365 584 aa13.68□□□□□ -0.22
SCN8A-205ENST00000548086 PTPN12Q05209 780 aaKnown RBP13.68□□□□□ -0.22
SCN8A-205ENST00000548086 SEC31BQ9NQW1 1179 aa13.68□□□□□ -0.22
SCN8A-205ENST00000548086 ITGA6P23229 1130 aa13.67□□□□□ -0.22
SCN8A-205ENST00000548086 ANKRD45Q5TZF3 282 aa13.67□□□□□ -0.22
SCN8A-205ENST00000548086 GCC1Q96CN9 775 aa13.67□□□□□ -0.22
SCN8A-205ENST00000548086 LNPKQ9C0E8 428 aa13.67□□□□□ -0.22
SCN8A-205ENST00000548086 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.67□□□□□ -0.22
SCN8A-205ENST00000548086 SLC10A5Q5PT55 438 aa13.67□□□□□ -0.22
SCN8A-205ENST00000548086 ANKRD31Q8N7Z5 1873 aa13.66□□□□□ -0.22
SCN8A-205ENST00000548086 SPEF2Q9C093 1822 aa13.66□□□□□ -0.22
SCN8A-205ENST00000548086 NRXN2Q9P2S2 1712 aa13.66□□□□□ -0.22
SCN8A-205ENST00000548086 CCDC57Q2TAC2 916 aa13.66□□□□□ -0.22
SCN8A-205ENST00000548086 PUS3Q9BZE2 481 aaKnown RBP13.66□□□□□ -0.22
SCN8A-205ENST00000548086 PARP3Q9Y6F1 533 aa13.66□□□□□ -0.22
SCN8A-205ENST00000548086 NUCB1Q02818 461 aa13.65□□□□□ -0.22
SCN8A-205ENST00000548086 IFIT5Q13325 482 aaKnown RBP13.65□□□□□ -0.22
SCN8A-205ENST00000548086 OS9Q13438 667 aaPredicted RBP13.65□□□□□ -0.22
SCN8A-205ENST00000548086 LRRC24Q50LG9 513 aa13.65□□□□□ -0.22
SCN8A-205ENST00000548086 IL1RAPL2Q9NP60 686 aa13.65□□□□□ -0.22
SCN8A-205ENST00000548086 RGS3P49796 1198 aa13.65□□□□□ -0.22
SCN8A-205ENST00000548086 ST5P78524 1137 aa13.65□□□□□ -0.22
SCN8A-205ENST00000548086 CCDC152Q4G0S7 254 aa13.65□□□□□ -0.22
SCN8A-205ENST00000548086 NLRP3Q96P20 1036 aa13.65□□□□□ -0.22
SCN8A-205ENST00000548086 COPRSQ9NQ92 184 aa13.65□□□□□ -0.22
SCN8A-205ENST00000548086 ATF5Q9Y2D1 282 aaPredicted RBP13.65□□□□□ -0.22
SCN8A-205ENST00000548086 SASH1O94885 1247 aa13.64□□□□□ -0.23
SCN8A-205ENST00000548086 SLC51AQ86UW1 340 aa13.64□□□□□ -0.23
SCN8A-205ENST00000548086 CHD1LQ86WJ1 897 aa13.64□□□□□ -0.23
SCN8A-205ENST00000548086 C16orf71Q8IYS4 520 aaPredicted RBP13.64□□□□□ -0.23
SCN8A-205ENST00000548086 ANKRD18BA2A2Z9 1011 aa13.63□□□□□ -0.23
SCN8A-205ENST00000548086 SF3B3Q15393 1217 aaKnown RBP13.63□□□□□ -0.23
SCN8A-205ENST00000548086 TAF7LQ5H9L4 462 aa13.63□□□□□ -0.23
SCN8A-205ENST00000548086 OTUD7AQ8TE49 926 aaPredicted RBP13.63□□□□□ -0.23
SCN8A-205ENST00000548086 G3BP1Q13283 466 aaKnown RBP eCLIP13.63□□□□□ -0.23
SCN8A-205ENST00000548086 ATG9AQ7Z3C6 839 aa13.63□□□□□ -0.23
SCN8A-205ENST00000548086 RHPN1Q8TCX5 695 aa13.63□□□□□ -0.23
SCN8A-205ENST00000548086 LRRCC1Q9C099 1032 aa13.63□□□□□ -0.23
SCN8A-205ENST00000548086 GOLGB1Q14789 3259 aaKnown RBP13.62□□□□□ -0.23
SCN8A-205ENST00000548086 HSP90B1P14625 803 aaKnown RBP13.62□□□□□ -0.23
SCN8A-205ENST00000548086 CELF1Q92879 486 aaKnown RBP13.62□□□□□ -0.23
SCN8A-205ENST00000548086 LRP5O75197 1615 aa13.62□□□□□ -0.23
SCN8A-205ENST00000548086 EYA2O00167 538 aa13.62□□□□□ -0.23
SCN8A-205ENST00000548086 SLC16A10Q8TF71 515 aa13.62□□□□□ -0.23
SCN8A-205ENST00000548086 COL11A2P13942 1736 aaPredicted RBP13.61□□□□□ -0.23
SCN8A-205ENST00000548086 TFCP2Q12800 502 aa13.61□□□□□ -0.23
SCN8A-205ENST00000548086 LDHAL6AQ6ZMR3 332 aa13.61□□□□□ -0.23
SCN8A-205ENST00000548086 RTL9Q8NET4 1388 aa13.61□□□□□ -0.23
SCN8A-205ENST00000548086 RIC1Q4ADV7 1423 aa13.6□□□□□ -0.23
SCN8A-205ENST00000548086 RAB11FIP3O75154 756 aa13.6□□□□□ -0.23
SCN8A-205ENST00000548086 KIF1BPQ96EK5 621 aa13.6□□□□□ -0.23
SCN8A-205ENST00000548086 CNNM1Q9NRU3 951 aa13.6□□□□□ -0.23
SCN8A-205ENST00000548086 CRY2Q49AN0 593 aa13.6□□□□□ -0.23
SCN8A-205ENST00000548086 HSP90AB4PQ58FF6 505 aa13.6□□□□□ -0.23
SCN8A-205ENST00000548086 TSHZ3Q63HK5 1081 aa13.6□□□□□ -0.23
SCN8A-205ENST00000548086 HELBQ8NG08 1087 aaPredicted RBP13.6□□□□□ -0.23
SCN8A-205ENST00000548086 BRIP1Q9BX63 1249 aa13.6□□□□□ -0.23
SCN8A-205ENST00000548086 MTFR1LQ9H019 292 aa13.6□□□□□ -0.23
SCN8A-205ENST00000548086 RPGRQ92834 1020 aaKnown RBP13.59□□□□□ -0.23
SCN8A-205ENST00000548086 MPHOSPH8Q99549 860 aa13.59□□□□□ -0.23
SCN8A-205ENST00000548086 RIPOR2Q9Y4F9 1068 aa13.59□□□□□ -0.23
SCN8A-205ENST00000548086 SNAP23O00161 211 aa13.58□□□□□ -0.24
SCN8A-205ENST00000548086 DDX46Q7L014 1031 aaKnown RBP13.58□□□□□ -0.24
SCN8A-205ENST00000548086 ANKRD18AQ8IVF6 992 aa13.58□□□□□ -0.24
SCN8A-205ENST00000548086 CDC5LQ99459 802 aaKnown RBP13.58□□□□□ -0.24
SCN8A-205ENST00000548086 TLR7Q9NYK1 1049 aaKnown RBP13.58□□□□□ -0.24
SCN8A-205ENST00000548086 SRCAPQ6ZRS2 3230 aa13.58□□□□□ -0.24
SCN8A-205ENST00000548086 CIAO1O76071 339 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms