RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 CTSWP56202 376 aa14.35□□□□□ -0.11
CALCOCO1-208ENST00000547988 GPR162Q16538 588 aa14.35□□□□□ -0.11
CALCOCO1-208ENST00000547988 FTSJ3Q8IY81 847 aaKnown RBP14.35□□□□□ -0.11
CALCOCO1-208ENST00000547988 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.35□□□□□ -0.11
CALCOCO1-208ENST00000547988 CRAMP1Q96RY5 1269 aa14.35□□□□□ -0.11
CALCOCO1-208ENST00000547988 BCS1LQ9Y276 419 aa14.35□□□□□ -0.11
CALCOCO1-208ENST00000547988 RTL9Q8NET4 1388 aa14.34□□□□□ -0.11
CALCOCO1-208ENST00000547988 YBX3P16989 372 aaKnown RBP eCLIP14.34□□□□□ -0.11
CALCOCO1-208ENST00000547988 CCDC152Q4G0S7 254 aa14.34□□□□□ -0.11
CALCOCO1-208ENST00000547988 PRPF40BQ6NWY9 871 aaKnown RBP14.34□□□□□ -0.11
CALCOCO1-208ENST00000547988 DDX46Q7L014 1031 aaKnown RBP14.34□□□□□ -0.11
CALCOCO1-208ENST00000547988 DZIP1LQ8IYY4 767 aaKnown RBP14.34□□□□□ -0.11
CALCOCO1-208ENST00000547988 PELP1Q8IZL8 1130 aaKnown RBP14.34□□□□□ -0.11
CALCOCO1-208ENST00000547988 CLUAP1Q96AJ1 413 aa14.34□□□□□ -0.11
CALCOCO1-208ENST00000547988 USP44Q9H0E7 712 aa14.34□□□□□ -0.11
CALCOCO1-208ENST00000547988 TNNQ9UQP3 1299 aa14.34□□□□□ -0.11
CALCOCO1-208ENST00000547988 COL4A1P02462 1669 aa14.33□□□□□ -0.11
CALCOCO1-208ENST00000547988 LTBP1Q14766 1721 aa14.33□□□□□ -0.12
CALCOCO1-208ENST00000547988 GRIN3BO60391 1043 aa14.33□□□□□ -0.12
CALCOCO1-208ENST00000547988 NBPF7P0C2Y1 421 aaPredicted RBP14.33□□□□□ -0.12
CALCOCO1-208ENST00000547988 WWC3Q9ULE0 1092 aa14.33□□□□□ -0.12
CALCOCO1-208ENST00000547988 TMEM57Q8N5G2 664 aa14.32□□□□□ -0.12
CALCOCO1-208ENST00000547988 TTLL11Q8NHH1 800 aa14.32□□□□□ -0.12
CALCOCO1-208ENST00000547988 HDAC5Q9UQL6 1122 aa14.32□□□□□ -0.12
CALCOCO1-208ENST00000547988 CSF1RP07333 972 aa14.31□□□□□ -0.12
CALCOCO1-208ENST00000547988 RLBP1P12271 317 aa14.31□□□□□ -0.12
CALCOCO1-208ENST00000547988 FOXO4P98177 505 aa14.31□□□□□ -0.12
CALCOCO1-208ENST00000547988 GRAPQ13588 217 aa14.31□□□□□ -0.12
CALCOCO1-208ENST00000547988 SOGA3Q5TF21 947 aa14.31□□□□□ -0.12
CALCOCO1-208ENST00000547988 TMC4Q7Z404 712 aa14.31□□□□□ -0.12
CALCOCO1-208ENST00000547988 GRAPLQ8TC17 118 aaPredicted RBP14.31□□□□□ -0.12
CALCOCO1-208ENST00000547988 TIAM2Q8IVF5 1701 aa14.31□□□□□ -0.12
CALCOCO1-208ENST00000547988 UTRNP46939 3433 aa14.31□□□□□ -0.12
CALCOCO1-208ENST00000547988 PPEF1O14829 653 aaPredicted RBP14.3□□□□□ -0.12
CALCOCO1-208ENST00000547988 BBOX1O75936 387 aa14.3□□□□□ -0.12
CALCOCO1-208ENST00000547988 GNAI3P08754 354 aa14.3□□□□□ -0.12
CALCOCO1-208ENST00000547988 UBTFL1P0CB47 393 aaPredicted RBP14.3□□□□□ -0.12
CALCOCO1-208ENST00000547988 SUCLG2Q96I99 432 aa14.3□□□□□ -0.12
CALCOCO1-208ENST00000547988 PLIN1O60240 522 aa14.29□□□□□ -0.12
CALCOCO1-208ENST00000547988 PDE3AQ14432 1141 aa14.29□□□□□ -0.12
CALCOCO1-208ENST00000547988 RABL6Q3YEC7 729 aaPredicted RBP14.29□□□□□ -0.12
CALCOCO1-208ENST00000547988 CC2D2BQ6DHV5 1058 aa14.29□□□□□ -0.12
CALCOCO1-208ENST00000547988 ITPRIPQ8IWB1 547 aa14.29□□□□□ -0.12
CALCOCO1-208ENST00000547988 C7orf43Q8WVR3 580 aa14.29□□□□□ -0.12
CALCOCO1-208ENST00000547988 KAZALD1Q96I82 304 aa14.29□□□□□ -0.12
CALCOCO1-208ENST00000547988 CDC5LQ99459 802 aaKnown RBP14.29□□□□□ -0.12
CALCOCO1-208ENST00000547988 MEIS3Q99687 375 aa14.29□□□□□ -0.12
CALCOCO1-208ENST00000547988 GREM2Q9H772 168 aa14.29□□□□□ -0.12
CALCOCO1-208ENST00000547988 C21orf2O43822 256 aa14.28□□□□□ -0.12
CALCOCO1-208ENST00000547988 FAM161AQ3B820 660 aa14.28□□□□□ -0.12
CALCOCO1-208ENST00000547988 GRIPAP1Q4V328 841 aa14.28□□□□□ -0.12
CALCOCO1-208ENST00000547988 CCDC93Q567U6 631 aa14.28□□□□□ -0.12
CALCOCO1-208ENST00000547988 EPHA10Q5JZY3 1008 aa14.28□□□□□ -0.12
CALCOCO1-208ENST00000547988 LMBR1LQ6UX01 489 aa14.28□□□□□ -0.12
CALCOCO1-208ENST00000547988 PANK1Q8TE04 598 aa14.28□□□□□ -0.12
CALCOCO1-208ENST00000547988 SNED1Q8TER0 1413 aa14.28□□□□□ -0.12
CALCOCO1-208ENST00000547988 CELF1Q92879 486 aaKnown RBP14.28□□□□□ -0.12
CALCOCO1-208ENST00000547988 CCDC85AQ96PX6 553 aaPredicted RBP14.28□□□□□ -0.12
CALCOCO1-208ENST00000547988 BICC1Q9H694 974 aaKnown RBP14.28□□□□□ -0.12
CALCOCO1-208ENST00000547988 ATP6V0A2Q9Y487 856 aa14.28□□□□□ -0.12
CALCOCO1-208ENST00000547988 ITGA6P23229 1130 aa14.27□□□□□ -0.13
CALCOCO1-208ENST00000547988 RRP1P56182 461 aaKnown RBP14.27□□□□□ -0.13
CALCOCO1-208ENST00000547988 RPS8P62241 208 aaKnown RBP14.27□□□□□ -0.13
CALCOCO1-208ENST00000547988 ANKRD18AQ8IVF6 992 aa14.27□□□□□ -0.13
CALCOCO1-208ENST00000547988 TMX4Q9H1E5 349 aaPredicted RBP14.27□□□□□ -0.13
CALCOCO1-208ENST00000547988 SEC31BQ9NQW1 1179 aa14.27□□□□□ -0.13
CALCOCO1-208ENST00000547988 ANKRD18BA2A2Z9 1011 aa14.26□□□□□ -0.13
CALCOCO1-208ENST00000547988 IFIT5Q13325 482 aaKnown RBP14.26□□□□□ -0.13
CALCOCO1-208ENST00000547988 MVPQ14764 893 aaKnown RBP14.26□□□□□ -0.13
CALCOCO1-208ENST00000547988 CCDC57Q2TAC2 916 aa14.26□□□□□ -0.13
CALCOCO1-208ENST00000547988 ARHGAP27Q6ZUM4 889 aa14.26□□□□□ -0.13
CALCOCO1-208ENST00000547988 SP8Q8IXZ3 490 aa14.26□□□□□ -0.13
CALCOCO1-208ENST00000547988 RTKN2Q8IZC4 609 aa14.26□□□□□ -0.13
CALCOCO1-208ENST00000547988 ANKRD44Q8N8A2 993 aa14.26□□□□□ -0.13
CALCOCO1-208ENST00000547988 ZNF219Q9P2Y4 722 aaPredicted RBP14.26□□□□□ -0.13
CALCOCO1-208ENST00000547988 DDX19BQ9UMR2 479 aa14.26□□□□□ -0.13
CALCOCO1-208ENST00000547988 CHMP3Q9Y3E7 222 aa14.26□□□□□ -0.13
CALCOCO1-208ENST00000547988 DUOX1Q9NRD9 1551 aa14.26□□□□□ -0.13
CALCOCO1-208ENST00000547988 LTBP3Q9NS15 1303 aa14.25□□□□□ -0.13
CALCOCO1-208ENST00000547988 ZBTB7BO15156 539 aaPredicted RBP14.25□□□□□ -0.13
CALCOCO1-208ENST00000547988 GNAI2P04899 355 aa14.25□□□□□ -0.13
CALCOCO1-208ENST00000547988 CHMP4BQ9H444 224 aaKnown RBP14.25□□□□□ -0.13
CALCOCO1-208ENST00000547988 LRRFIP2Q9Y608 721 aaKnown RBP14.25□□□□□ -0.13
CALCOCO1-208ENST00000547988 PSME4Q14997 1843 aa14.25□□□□□ -0.13
CALCOCO1-208ENST00000547988 IGHMBP2P38935 993 aaKnown RBP14.24□□□□□ -0.13
CALCOCO1-208ENST00000547988 TAOK3Q9H2K8 898 aa14.24□□□□□ -0.13
CALCOCO1-208ENST00000547988 BSDC1Q9NW68 430 aaPredicted RBP14.24□□□□□ -0.13
CALCOCO1-208ENST00000547988 COG6Q9Y2V7 657 aa14.24□□□□□ -0.13
CALCOCO1-208ENST00000547988 MYH13Q9UKX3 1938 aa14.23□□□□□ -0.13
CALCOCO1-208ENST00000547988 NFKBIEO00221 500 aa14.23□□□□□ -0.13
CALCOCO1-208ENST00000547988 FKBP4Q02790 459 aaKnown RBP eCLIP14.23□□□□□ -0.13
CALCOCO1-208ENST00000547988 TAF7LQ5H9L4 462 aa14.23□□□□□ -0.13
CALCOCO1-208ENST00000547988 C20orf194Q5TEA3 1177 aa14.23□□□□□ -0.13
CALCOCO1-208ENST00000547988 OLFM4Q6UX06 510 aa14.23□□□□□ -0.13
CALCOCO1-208ENST00000547988 PSMD1Q99460 953 aa14.23□□□□□ -0.13
CALCOCO1-208ENST00000547988 MPHOSPH8Q99549 860 aa14.23□□□□□ -0.13
CALCOCO1-208ENST00000547988 MTX1Q13505 466 aa14.22□□□□□ -0.13
CALCOCO1-208ENST00000547988 ARAP2Q8WZ64 1704 aa14.21□□□□□ -0.13
CALCOCO1-208ENST00000547988 RASSF7Q02833 373 aa14.21□□□□□ -0.13
CALCOCO1-208ENST00000547988 DPP8Q6V1X1 898 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms