RNA–Protein interactions for RNA: ENST00000547923.1

TROAP-206, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TROAP, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-206ENST00000547923 ARFGEF1Q9Y6D6 1849 aa12.7□□□□□ -0.38
TROAP-206ENST00000547923 BCAR3O75815 825 aa12.7□□□□□ -0.38
TROAP-206ENST00000547923 ALDH1L1O75891 902 aa12.7□□□□□ -0.38
TROAP-206ENST00000547923 GRAPQ13588 217 aa12.7□□□□□ -0.38
TROAP-206ENST00000547923 SF3B3Q15393 1217 aaKnown RBP12.7□□□□□ -0.38
TROAP-206ENST00000547923 C9orf131Q5VYM1 1079 aa12.7□□□□□ -0.38
TROAP-206ENST00000547923 GRAPLQ8TC17 118 aaPredicted RBP12.7□□□□□ -0.38
TROAP-206ENST00000547923 CHMP3Q9Y3E7 222 aa12.7□□□□□ -0.38
TROAP-206ENST00000547923 DDX60Q8IY21 1712 aaKnown RBP12.7□□□□□ -0.38
TROAP-206ENST00000547923 H7C1W4 665 aa12.7□□□□□ -0.38
TROAP-206ENST00000547923 GRM8O00222 908 aa12.7□□□□□ -0.38
TROAP-206ENST00000547923 IPO8O15397 1037 aaKnown RBP12.7□□□□□ -0.38
TROAP-206ENST00000547923 CTSWP56202 376 aa12.7□□□□□ -0.38
TROAP-206ENST00000547923 LAMB2P55268 1798 aa12.69□□□□□ -0.38
TROAP-206ENST00000547923 NFKBIEO00221 500 aa12.69□□□□□ -0.38
TROAP-206ENST00000547923 BBOX1O75936 387 aa12.69□□□□□ -0.38
TROAP-206ENST00000547923 LMNB1P20700 586 aa12.69□□□□□ -0.38
TROAP-206ENST00000547923 BRPF1P55201 1214 aaPredicted RBP12.69□□□□□ -0.38
TROAP-206ENST00000547923 RTKN2Q8IZC4 609 aa12.69□□□□□ -0.38
TROAP-206ENST00000547923 ZNF784Q8NCA9 323 aaPredicted RBP12.69□□□□□ -0.38
TROAP-206ENST00000547923 ZNF526Q8TF50 670 aaPredicted RBP12.69□□□□□ -0.38
TROAP-206ENST00000547923 CC2D2BQ6DHV5 1058 aa12.68□□□□□ -0.38
TROAP-206ENST00000547923 C7orf43Q8WVR3 580 aa12.68□□□□□ -0.38
TROAP-206ENST00000547923 CELF1Q92879 486 aaKnown RBP12.68□□□□□ -0.38
TROAP-206ENST00000547923 CLUAP1Q96AJ1 413 aa12.68□□□□□ -0.38
TROAP-206ENST00000547923 SEC31BQ9NQW1 1179 aa12.68□□□□□ -0.38
TROAP-206ENST00000547923 CHD4Q14839 1912 aa12.68□□□□□ -0.38
TROAP-206ENST00000547923 CCT4P50991 539 aaKnown RBP12.67□□□□□ -0.38
TROAP-206ENST00000547923 SLC51AQ86UW1 340 aa12.67□□□□□ -0.38
TROAP-206ENST00000547923 ANKRD18AQ8IVF6 992 aa12.67□□□□□ -0.38
TROAP-206ENST00000547923 ATP6V0A2Q9Y487 856 aa12.67□□□□□ -0.38
TROAP-206ENST00000547923 TAF1P21675 1872 aa12.67□□□□□ -0.38
TROAP-206ENST00000547923 CASP7P55210 303 aa12.67□□□□□ -0.38
TROAP-206ENST00000547923 RPS8P62241 208 aaKnown RBP12.67□□□□□ -0.38
TROAP-206ENST00000547923 FKBP4Q02790 459 aaKnown RBP eCLIP12.67□□□□□ -0.38
TROAP-206ENST00000547923 DPP8Q6V1X1 898 aaPredicted RBP12.67□□□□□ -0.38
TROAP-206ENST00000547923 TTLL11Q8NHH1 800 aa12.67□□□□□ -0.38
TROAP-206ENST00000547923 CDC5LQ99459 802 aaKnown RBP12.67□□□□□ -0.38
TROAP-206ENST00000547923 GREM2Q9H772 168 aa12.67□□□□□ -0.38
TROAP-206ENST00000547923 ZNF277Q9NRM2 450 aaPredicted RBP12.67□□□□□ -0.38
TROAP-206ENST00000547923 NBPF7P0C2Y1 421 aaPredicted RBP12.66□□□□□ -0.38
TROAP-206ENST00000547923 FAM161AQ3B820 660 aa12.66□□□□□ -0.38
TROAP-206ENST00000547923 ZKSCAN2Q63HK3 967 aa12.66□□□□□ -0.38
TROAP-206ENST00000547923 ATF7IPQ6VMQ6 1270 aa12.66□□□□□ -0.38
TROAP-206ENST00000547923 TMC4Q7Z404 712 aa12.66□□□□□ -0.38
TROAP-206ENST00000547923 FTSJ3Q8IY81 847 aaKnown RBP12.66□□□□□ -0.38
TROAP-206ENST00000547923 ARHGAP45Q92619 1136 aa12.66□□□□□ -0.38
TROAP-206ENST00000547923 NSFL1CQ9UNZ2 370 aaKnown RBP12.66□□□□□ -0.38
TROAP-206ENST00000547923 TRIM27P14373 513 aa12.65□□□□□ -0.38
TROAP-206ENST00000547923 ITGA6P23229 1130 aa12.65□□□□□ -0.38
TROAP-206ENST00000547923 IGHMBP2P38935 993 aaKnown RBP12.65□□□□□ -0.38
TROAP-206ENST00000547923 GRIPAP1Q4V328 841 aa12.65□□□□□ -0.38
TROAP-206ENST00000547923 TAF7LQ5H9L4 462 aa12.65□□□□□ -0.38
TROAP-206ENST00000547923 LMBR1LQ6UX01 489 aa12.65□□□□□ -0.38
TROAP-206ENST00000547923 SP8Q8IXZ3 490 aa12.65□□□□□ -0.38
TROAP-206ENST00000547923 MPNDQ8N594 471 aa12.65□□□□□ -0.38
TROAP-206ENST00000547923 UBTFL1P0CB47 393 aaPredicted RBP12.64□□□□□ -0.39
TROAP-206ENST00000547923 PRELPP51888 382 aa12.64□□□□□ -0.39
TROAP-206ENST00000547923 C1QTNF8P60827 252 aa12.64□□□□□ -0.39
TROAP-206ENST00000547923 IFIT5Q13325 482 aaKnown RBP12.64□□□□□ -0.39
TROAP-206ENST00000547923 SUCLG2Q96I99 432 aa12.64□□□□□ -0.39
TROAP-206ENST00000547923 MPHOSPH8Q99549 860 aa12.64□□□□□ -0.39
TROAP-206ENST00000547923 PLA2G12BQ9BX93 195 aa12.64□□□□□ -0.39
TROAP-206ENST00000547923 ANKIB1Q9P2G1 1089 aa12.64□□□□□ -0.39
TROAP-206ENST00000547923 LTBP3Q9NS15 1303 aa12.64□□□□□ -0.39
TROAP-206ENST00000547923 ANKRD18BA2A2Z9 1011 aa12.64□□□□□ -0.39
TROAP-206ENST00000547923 CCDC57Q2TAC2 916 aa12.64□□□□□ -0.39
TROAP-206ENST00000547923 LARGE2Q8N3Y3 721 aa12.64□□□□□ -0.39
TROAP-206ENST00000547923 JDP2Q8WYK2 163 aa12.64□□□□□ -0.39
TROAP-206ENST00000547923 PSMD1Q99460 953 aa12.64□□□□□ -0.39
TROAP-206ENST00000547923 GPBP1L1Q9HC44 474 aaPredicted RBP12.64□□□□□ -0.39
TROAP-206ENST00000547923 RCAN3Q9UKA8 241 aa12.64□□□□□ -0.39
TROAP-206ENST00000547923 TNNQ9UQP3 1299 aa12.64□□□□□ -0.39
TROAP-206ENST00000547923 COL4A1P02462 1669 aa12.63□□□□□ -0.39
TROAP-206ENST00000547923 FER1L6Q2WGJ9 1857 aa12.63□□□□□ -0.39
TROAP-206ENST00000547923 C6orf229H3BNL8 230 aa12.63□□□□□ -0.39
TROAP-206ENST00000547923 PPIP5K2O43314 1243 aa12.63□□□□□ -0.39
TROAP-206ENST00000547923 IARSP41252 1262 aaKnown RBP12.63□□□□□ -0.39
TROAP-206ENST00000547923 FOXO4P98177 505 aa12.63□□□□□ -0.39
TROAP-206ENST00000547923 EPHA10Q5JZY3 1008 aa12.63□□□□□ -0.39
TROAP-206ENST00000547923 SUPT20HQ8NEM7 779 aa12.63□□□□□ -0.39
TROAP-206ENST00000547923 USP44Q9H0E7 712 aa12.63□□□□□ -0.39
TROAP-206ENST00000547923 SBF1O95248 1867 aa12.62□□□□□ -0.39
TROAP-206ENST00000547923 MYH3P11055 1940 aa12.62□□□□□ -0.39
TROAP-206ENST00000547923 BICC1Q9H694 974 aaKnown RBP12.62□□□□□ -0.39
TROAP-206ENST00000547923 UTYO14607 1347 aa12.61□□□□□ -0.39
TROAP-206ENST00000547923 CSF1RP07333 972 aa12.61□□□□□ -0.39
TROAP-206ENST00000547923 GPSM2P81274 684 aa12.61□□□□□ -0.39
TROAP-206ENST00000547923 AOC3Q16853 763 aa12.61□□□□□ -0.39
TROAP-206ENST00000547923 DPY19L2Q6NUT2 758 aa12.61□□□□□ -0.39
TROAP-206ENST00000547923 DZIP1LQ8IYY4 767 aaKnown RBP12.61□□□□□ -0.39
TROAP-206ENST00000547923 KAZALD1Q96I82 304 aa12.61□□□□□ -0.39
TROAP-206ENST00000547923 HDAC5Q9UQL6 1122 aa12.61□□□□□ -0.39
TROAP-206ENST00000547923 CCDC88AQ3V6T2 1871 aa12.61□□□□□ -0.39
TROAP-206ENST00000547923 SNED1Q8TER0 1413 aa12.61□□□□□ -0.39
TROAP-206ENST00000547923 RTL9Q8NET4 1388 aa12.61□□□□□ -0.39
TROAP-206ENST00000547923 KDM2BQ8NHM5 1336 aa12.61□□□□□ -0.39
TROAP-206ENST00000547923 UFL1O94874 794 aa12.61□□□□□ -0.39
TROAP-206ENST00000547923 INTS3Q68E01 1043 aaKnown RBP12.61□□□□□ -0.39
TROAP-206ENST00000547923 ITPRIPQ8IWB1 547 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms