RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 CDCA7LQ96GN5 454 aa12.44□□□□□ -0.42
CDK4-205ENST00000547853 TAF1P21675 1872 aa12.44□□□□□ -0.42
CDK4-205ENST00000547853 FAM177BA6PVY3 158 aa12.43□□□□□ -0.42
CDK4-205ENST00000547853 FAM155AB1AL88 458 aaPredicted RBP12.43□□□□□ -0.42
CDK4-205ENST00000547853 NBPF26B4DH59 902 aa12.43□□□□□ -0.42
CDK4-205ENST00000547853 NCBP3Q53F19 620 aaKnown RBP12.43□□□□□ -0.42
CDK4-205ENST00000547853 NBPF10Q6P3W6 841 aaKnown RBP12.43□□□□□ -0.42
CDK4-205ENST00000547853 NBPF15Q8N660 670 aa12.43□□□□□ -0.42
CDK4-205ENST00000547853 ZNF408Q9H9D4 720 aa12.43□□□□□ -0.42
CDK4-205ENST00000547853 DAXXQ9UER7 740 aaPredicted RBP12.43□□□□□ -0.42
CDK4-205ENST00000547853 ADAMTS8Q9UP79 889 aa12.43□□□□□ -0.42
CDK4-205ENST00000547853 USP16Q9Y5T5 823 aa12.43□□□□□ -0.42
CDK4-205ENST00000547853 GNAT3A8MTJ3 354 aa12.42□□□□□ -0.42
CDK4-205ENST00000547853 E9PSI1 815 aa12.42□□□□□ -0.42
CDK4-205ENST00000547853 HOXA10P31260 410 aaPredicted RBP12.42□□□□□ -0.42
CDK4-205ENST00000547853 GMPSP49915 693 aaPredicted RBP12.42□□□□□ -0.42
CDK4-205ENST00000547853 TRMT2AQ8IZ69 625 aaKnown RBP12.42□□□□□ -0.42
CDK4-205ENST00000547853 TRPM4Q8TD43 1214 aa12.42□□□□□ -0.42
CDK4-205ENST00000547853 DLG5Q8TDM6 1919 aa12.41□□□□□ -0.42
CDK4-205ENST00000547853 PPEF1O14829 653 aaPredicted RBP12.41□□□□□ -0.42
CDK4-205ENST00000547853 PPIP5K2O43314 1243 aa12.41□□□□□ -0.42
CDK4-205ENST00000547853 HIRAP54198 1017 aaPredicted RBP12.41□□□□□ -0.42
CDK4-205ENST00000547853 HUNKP57058 714 aa12.41□□□□□ -0.42
CDK4-205ENST00000547853 SLFN5Q08AF3 891 aa12.41□□□□□ -0.42
CDK4-205ENST00000547853 HLFQ16534 295 aa12.41□□□□□ -0.42
CDK4-205ENST00000547853 AOC3Q16853 763 aa12.41□□□□□ -0.42
CDK4-205ENST00000547853 GRIPAP1Q4V328 841 aa12.41□□□□□ -0.42
CDK4-205ENST00000547853 NUTM1Q86Y26 1132 aa12.41□□□□□ -0.42
CDK4-205ENST00000547853 GAS2L2Q8NHY3 880 aa12.41□□□□□ -0.42
CDK4-205ENST00000547853 PSME4Q14997 1843 aa12.41□□□□□ -0.42
CDK4-205ENST00000547853 CXCL9Q07325 125 aa12.4□□□□□ -0.42
CDK4-205ENST00000547853 ZC3H15Q8WU90 426 aaKnown RBP12.4□□□□□ -0.42
CDK4-205ENST00000547853 RPGRQ92834 1020 aaKnown RBP12.4□□□□□ -0.42
CDK4-205ENST00000547853 PAPPA2Q9BXP8 1791 aa12.4□□□□□ -0.42
CDK4-205ENST00000547853 SCN9AQ15858 1988 aa12.39□□□□□ -0.43
CDK4-205ENST00000547853 UBN2Q6ZU65 1347 aa12.39□□□□□ -0.43
CDK4-205ENST00000547853 SHTN1A0MZ66 631 aa12.39□□□□□ -0.43
CDK4-205ENST00000547853 BTBD11A6QL63 1104 aa12.39□□□□□ -0.43
CDK4-205ENST00000547853 DIAPH1O60610 1272 aaKnown RBP12.39□□□□□ -0.43
CDK4-205ENST00000547853 NEFMP07197 916 aa12.39□□□□□ -0.43
CDK4-205ENST00000547853 PDE3AQ14432 1141 aa12.39□□□□□ -0.43
CDK4-205ENST00000547853 DLK2Q6UY11 383 aa12.39□□□□□ -0.43
CDK4-205ENST00000547853 C3orf67Q6ZVT6 689 aa12.39□□□□□ -0.43
CDK4-205ENST00000547853 CDC37L1Q7L3B6 337 aa12.39□□□□□ -0.43
CDK4-205ENST00000547853 CTU1Q7Z7A3 348 aaKnown RBP12.39□□□□□ -0.43
CDK4-205ENST00000547853 ZNRF3Q9ULT6 936 aa12.39□□□□□ -0.43
CDK4-205ENST00000547853 HPS5Q9UPZ3 1129 aa12.39□□□□□ -0.43
CDK4-205ENST00000547853 SALL2Q9Y467 1007 aaPredicted RBP12.39□□□□□ -0.43
CDK4-205ENST00000547853 BRCA2P51587 3418 aa12.39□□□□□ -0.43
CDK4-205ENST00000547853 CENPFP49454 3210 aa12.39□□□□□ -0.43
CDK4-205ENST00000547853 CEP290O15078 2479 aa12.38□□□□□ -0.43
CDK4-205ENST00000547853 LAMB1P07942 1786 aa12.38□□□□□ -0.43
CDK4-205ENST00000547853 SNRPA1P09661 255 aaKnown RBP12.38□□□□□ -0.43
CDK4-205ENST00000547853 RGMBQ6NW40 437 aa12.38□□□□□ -0.43
CDK4-205ENST00000547853 CRAMP1Q96RY5 1269 aa12.38□□□□□ -0.43
CDK4-205ENST00000547853 NYXQ9GZU5 481 aa12.38□□□□□ -0.43
CDK4-205ENST00000547853 RNF186Q9NXI6 227 aa12.38□□□□□ -0.43
CDK4-205ENST00000547853 MAPK8IP3Q9UPT6 1336 aa12.37□□□□□ -0.43
CDK4-205ENST00000547853 SLC10A3P09131 477 aa12.37□□□□□ -0.43
CDK4-205ENST00000547853 GTF2E1P29083 439 aaPredicted RBP12.37□□□□□ -0.43
CDK4-205ENST00000547853 KIF23Q02241 960 aaPredicted RBP12.37□□□□□ -0.43
CDK4-205ENST00000547853 RTFDC1Q9BY42 306 aaPredicted RBP12.37□□□□□ -0.43
CDK4-205ENST00000547853 TRPA1O75762 1119 aa12.36□□□□□ -0.43
CDK4-205ENST00000547853 GCC1Q96CN9 775 aa12.36□□□□□ -0.43
CDK4-205ENST00000547853 VPS33BQ9H267 617 aa12.36□□□□□ -0.43
CDK4-205ENST00000547853 TRIOBPQ9H2D6 2365 aa12.36□□□□□ -0.43
CDK4-205ENST00000547853 ABCC4O15439 1325 aa12.36□□□□□ -0.43
CDK4-205ENST00000547853 SZT2Q5T011 3432 aa12.36□□□□□ -0.43
CDK4-205ENST00000547853 COL4A1P02462 1669 aa12.35□□□□□ -0.43
CDK4-205ENST00000547853 CUL9Q8IWT3 2517 aa12.35□□□□□ -0.43
CDK4-205ENST00000547853 PLIN1O60240 522 aa12.35□□□□□ -0.43
CDK4-205ENST00000547853 NTSR2O95665 410 aa12.35□□□□□ -0.43
CDK4-205ENST00000547853 USP48Q86UV5 1035 aa12.35□□□□□ -0.43
CDK4-205ENST00000547853 RBM17Q96I25 401 aaKnown RBP12.35□□□□□ -0.43
CDK4-205ENST00000547853 GBA2Q9HCG7 927 aaPredicted RBP12.35□□□□□ -0.43
CDK4-205ENST00000547853 ATP6V0A2Q9Y487 856 aa12.35□□□□□ -0.43
CDK4-205ENST00000547853 KIAA0100Q14667 2235 aaKnown RBP12.35□□□□□ -0.43
CDK4-205ENST00000547853 MAP3K15Q6ZN16 1313 aa12.35□□□□□ -0.43
CDK4-205ENST00000547853 ZNF646O15015 1829 aaPredicted RBP12.34□□□□□ -0.43
CDK4-205ENST00000547853 YDJCA8MPS7 323 aa12.34□□□□□ -0.43
CDK4-205ENST00000547853 ADM5C9JUS6 153 aa12.34□□□□□ -0.43
CDK4-205ENST00000547853 RAD17O75943 681 aa12.34□□□□□ -0.43
CDK4-205ENST00000547853 EGFRP00533 1210 aa12.34□□□□□ -0.43
CDK4-205ENST00000547853 KIAA2012Q0VF49 1180 aa12.34□□□□□ -0.43
CDK4-205ENST00000547853 HABP4Q5JVS0 413 aaKnown RBP12.34□□□□□ -0.43
CDK4-205ENST00000547853 MICALL2Q8IY33 904 aa12.34□□□□□ -0.43
CDK4-205ENST00000547853 CCDC102AQ96A19 550 aa12.34□□□□□ -0.43
CDK4-205ENST00000547853 BCL2L13Q9BXK5 485 aa12.34□□□□□ -0.43
CDK4-205ENST00000547853 ERVV-1B6SEH8 477 aa12.33□□□□□ -0.44
CDK4-205ENST00000547853 GPTP24298 496 aa12.33□□□□□ -0.44
CDK4-205ENST00000547853 ZNF157P51786 506 aaPredicted RBP12.33□□□□□ -0.44
CDK4-205ENST00000547853 KRT26Q7Z3Y9 468 aa12.33□□□□□ -0.44
CDK4-205ENST00000547853 SUPT20HQ8NEM7 779 aa12.33□□□□□ -0.44
CDK4-205ENST00000547853 PHACTR3Q96KR7 559 aa12.33□□□□□ -0.44
CDK4-205ENST00000547853 CSRNP1Q96S65 589 aa12.33□□□□□ -0.44
CDK4-205ENST00000547853 CNOT7Q9UIV1 285 aaKnown RBP12.33□□□□□ -0.44
CDK4-205ENST00000547853 U2SURPO15042 1029 aaKnown RBP12.32□□□□□ -0.44
CDK4-205ENST00000547853 SUSD4Q5VX71 490 aa12.32□□□□□ -0.44
CDK4-205ENST00000547853 RASAL3Q86YV0 1011 aa12.32□□□□□ -0.44
CDK4-205ENST00000547853 TNIP1Q15025 636 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms