RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 FAM161AQ3B820 660 aa21.65■■□□□ 1.06
RBFOX1-207ENST00000547338 RIC3Q7Z5B4 369 aa21.65■■□□□ 1.06
RBFOX1-207ENST00000547338 SSH1Q8WYL5 1049 aa21.65■■□□□ 1.06
RBFOX1-207ENST00000547338 KIF3CO14782 793 aa21.65■■□□□ 1.06
RBFOX1-207ENST00000547338 ALDH1B1P30837 517 aa21.65■■□□□ 1.06
RBFOX1-207ENST00000547338 CRAMP1Q96RY5 1269 aa21.65■■□□□ 1.06
RBFOX1-207ENST00000547338 TAF1P21675 1872 aa21.64■■□□□ 1.06
RBFOX1-207ENST00000547338 RPGRQ92834 1020 aaKnown RBP21.64■■□□□ 1.05
RBFOX1-207ENST00000547338 FAM89AQ96GI7 184 aa21.64■■□□□ 1.05
RBFOX1-207ENST00000547338 NLRP3Q96P20 1036 aa21.64■■□□□ 1.05
RBFOX1-207ENST00000547338 MYD88Q99836 296 aa21.64■■□□□ 1.05
RBFOX1-207ENST00000547338 TAOK3Q9H2K8 898 aa21.64■■□□□ 1.05
RBFOX1-207ENST00000547338 SLC4A2P04920 1241 aa21.63■■□□□ 1.05
RBFOX1-207ENST00000547338 CCDC93Q567U6 631 aa21.63■■□□□ 1.05
RBFOX1-207ENST00000547338 SOGA3Q5TF21 947 aa21.63■■□□□ 1.05
RBFOX1-207ENST00000547338 METTL22Q9BUU2 404 aaPredicted RBP21.63■■□□□ 1.05
RBFOX1-207ENST00000547338 CHMP4AQ9BY43 222 aa21.63■■□□□ 1.05
RBFOX1-207ENST00000547338 NMRK2Q9NPI5 230 aa21.63■■□□□ 1.05
RBFOX1-207ENST00000547338 PI4KAP2A4QPH2 592 aa21.62■■□□□ 1.05
RBFOX1-207ENST00000547338 PI4KAP1Q8N8J0 262 aa21.62■■□□□ 1.05
RBFOX1-207ENST00000547338 STK31Q9BXU1 1019 aa21.62■■□□□ 1.05
RBFOX1-207ENST00000547338 MAP3K2Q9Y2U5 619 aa21.62■■□□□ 1.05
RBFOX1-207ENST00000547338 ABCC4O15439 1325 aa21.62■■□□□ 1.05
RBFOX1-207ENST00000547338 ZC3H4Q9UPT8 1303 aaKnown RBP21.62■■□□□ 1.05
RBFOX1-207ENST00000547338 CACNA1FO60840 1977 aa21.62■■□□□ 1.05
RBFOX1-207ENST00000547338 IGHDP01880 384 aa21.61■■□□□ 1.05
RBFOX1-207ENST00000547338 IGKV5-2P06315 115 aa21.61■■□□□ 1.05
RBFOX1-207ENST00000547338 C1QTNF8P60827 252 aa21.61■■□□□ 1.05
RBFOX1-207ENST00000547338 KSR2Q6VAB6 950 aa21.61■■□□□ 1.05
RBFOX1-207ENST00000547338 RBM17Q96I25 401 aaKnown RBP21.61■■□□□ 1.05
RBFOX1-207ENST00000547338 RLBP1P12271 317 aa21.6■■□□□ 1.05
RBFOX1-207ENST00000547338 RTL5Q5HYW3 569 aaPredicted RBP21.6■■□□□ 1.05
RBFOX1-207ENST00000547338 COL4A5P29400 1685 aa21.6■■□□□ 1.05
RBFOX1-207ENST00000547338 FKBP4Q02790 459 aaKnown RBP eCLIP21.6■■□□□ 1.05
RBFOX1-207ENST00000547338 DDRGK1Q96HY6 314 aa21.6■■□□□ 1.05
RBFOX1-207ENST00000547338 NOP58Q9Y2X3 529 aaKnown RBP21.6■■□□□ 1.05
RBFOX1-207ENST00000547338 PPEF1O14829 653 aaPredicted RBP21.59■■□□□ 1.05
RBFOX1-207ENST00000547338 DDX58O95786 925 aaKnown RBP21.59■■□□□ 1.05
RBFOX1-207ENST00000547338 TRIM27P14373 513 aa21.59■■□□□ 1.05
RBFOX1-207ENST00000547338 FLIIQ13045 1269 aa21.59■■□□□ 1.05
RBFOX1-207ENST00000547338 CCDC191Q8NCU4 936 aa21.59■■□□□ 1.05
RBFOX1-207ENST00000547338 ZBTB47Q9UFB7 747 aaPredicted RBP21.59■■□□□ 1.05
RBFOX1-207ENST00000547338 HDAC1Q13547 482 aaPredicted RBP21.58■■□□□ 1.04
RBFOX1-207ENST00000547338 ZBTB38Q8NAP3 1195 aaPredicted RBP21.58■■□□□ 1.04
RBFOX1-207ENST00000547338 JARID2Q92833 1246 aaPredicted RBP21.58■■□□□ 1.04
RBFOX1-207ENST00000547338 BCL2L13Q9BXK5 485 aa21.58■■□□□ 1.04
RBFOX1-207ENST00000547338 ZNF277Q9NRM2 450 aaPredicted RBP21.58■■□□□ 1.04
RBFOX1-207ENST00000547338 NOB1Q9ULX3 412 aaKnown RBP21.58■■□□□ 1.04
RBFOX1-207ENST00000547338 IRS4O14654 1257 aaPredicted RBP21.57■■□□□ 1.04
RBFOX1-207ENST00000547338 SF3B3Q15393 1217 aaKnown RBP21.57■■□□□ 1.04
RBFOX1-207ENST00000547338 RTKN2Q8IZC4 609 aa21.57■■□□□ 1.04
RBFOX1-207ENST00000547338 LRRC37AA6NMS7 1700 aa21.57■■□□□ 1.04
RBFOX1-207ENST00000547338 CWF19L2Q2TBE0 894 aaKnown RBP21.56■■□□□ 1.04
RBFOX1-207ENST00000547338 PSMD1Q99460 953 aa21.56■■□□□ 1.04
RBFOX1-207ENST00000547338 CWC25Q9NXE8 425 aaPredicted RBP21.56■■□□□ 1.04
RBFOX1-207ENST00000547338 GLTPD2A6NH11 291 aa21.55■■□□□ 1.04
RBFOX1-207ENST00000547338 PCCAP05165 728 aaPredicted RBP21.55■■□□□ 1.04
RBFOX1-207ENST00000547338 ATP6V0A2Q9Y487 856 aa21.55■■□□□ 1.04
RBFOX1-207ENST00000547338 PCDHB15Q9Y5E8 787 aa21.55■■□□□ 1.04
RBFOX1-207ENST00000547338 CC2D2BQ6DHV5 1058 aa21.55■■□□□ 1.04
RBFOX1-207ENST00000547338 NEURL1BA8MQ27 555 aa21.54■■□□□ 1.04
RBFOX1-207ENST00000547338 POTECB2RU33 542 aa21.54■■□□□ 1.04
RBFOX1-207ENST00000547338 GRAPQ13588 217 aa21.54■■□□□ 1.04
RBFOX1-207ENST00000547338 GRAPLQ8TC17 118 aaPredicted RBP21.54■■□□□ 1.04
RBFOX1-207ENST00000547338 DUOX1Q9NRD9 1551 aa21.54■■□□□ 1.04
RBFOX1-207ENST00000547338 WDR90Q96KV7 1748 aa21.54■■□□□ 1.04
RBFOX1-207ENST00000547338 MRPL50Q8N5N7 158 aaKnown RBP21.53■■□□□ 1.04
RBFOX1-207ENST00000547338 CELF1Q92879 486 aaKnown RBP21.53■■□□□ 1.04
RBFOX1-207ENST00000547338 BBOX1O75936 387 aa21.52■■□□□ 1.04
RBFOX1-207ENST00000547338 IARSP41252 1262 aaKnown RBP21.52■■□□□ 1.04
RBFOX1-207ENST00000547338 FKBP5Q13451 457 aaPredicted RBP21.52■■□□□ 1.04
RBFOX1-207ENST00000547338 DDX46Q7L014 1031 aaKnown RBP21.52■■□□□ 1.04
RBFOX1-207ENST00000547338 API5Q9BZZ5 524 aaKnown RBP21.52■■□□□ 1.04
RBFOX1-207ENST00000547338 RRAGCQ9HB90 399 aa21.52■■□□□ 1.04
RBFOX1-207ENST00000547338 CDHR2Q9BYE9 1310 aa21.51■■□□□ 1.03
RBFOX1-207ENST00000547338 C8orf34Q49A92 452 aa21.51■■□□□ 1.03
RBFOX1-207ENST00000547338 DNAAF4Q8WXU2 420 aa21.51■■□□□ 1.03
RBFOX1-207ENST00000547338 ZBTB40Q9NUA8 1239 aa21.51■■□□□ 1.03
RBFOX1-207ENST00000547338 LTBP1Q14766 1721 aa21.51■■□□□ 1.03
RBFOX1-207ENST00000547338 ZNF541Q9H0D2 1346 aa21.5■■□□□ 1.03
RBFOX1-207ENST00000547338 F6X3S4 739 aa21.5■■□□□ 1.03
RBFOX1-207ENST00000547338 ITPRIPQ8IWB1 547 aa21.5■■□□□ 1.03
RBFOX1-207ENST00000547338 SP8Q8IXZ3 490 aa21.5■■□□□ 1.03
RBFOX1-207ENST00000547338 CASP7P55210 303 aa21.5■■□□□ 1.03
RBFOX1-207ENST00000547338 SEC31BQ9NQW1 1179 aa21.5■■□□□ 1.03
RBFOX1-207ENST00000547338 TNNQ9UQP3 1299 aa21.5■■□□□ 1.03
RBFOX1-207ENST00000547338 H7C1W4 665 aa21.49■■□□□ 1.03
RBFOX1-207ENST00000547338 RGS3P49796 1198 aa21.49■■□□□ 1.03
RBFOX1-207ENST00000547338 GCKRQ14397 625 aa21.49■■□□□ 1.03
RBFOX1-207ENST00000547338 RTFDC1Q9BY42 306 aaPredicted RBP21.49■■□□□ 1.03
RBFOX1-207ENST00000547338 MYH3P11055 1940 aa21.48■■□□□ 1.03
RBFOX1-207ENST00000547338 CEP350Q5VT06 3117 aa21.48■■□□□ 1.03
RBFOX1-207ENST00000547338 FZD9O00144 591 aa21.48■■□□□ 1.03
RBFOX1-207ENST00000547338 PDE8AO60658 829 aa21.48■■□□□ 1.03
RBFOX1-207ENST00000547338 DDNO94850 711 aaPredicted RBP21.48■■□□□ 1.03
RBFOX1-207ENST00000547338 NEXNQ0ZGT2 675 aa21.48■■□□□ 1.03
RBFOX1-207ENST00000547338 GRIPAP1Q4V328 841 aa21.48■■□□□ 1.03
RBFOX1-207ENST00000547338 TMEM57Q8N5G2 664 aa21.48■■□□□ 1.03
RBFOX1-207ENST00000547338 TOMM70O94826 608 aa21.47■■□□□ 1.03
RBFOX1-207ENST00000547338 BEND3Q5T5X7 828 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms