RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 CCDC192P0DO97 292 aa17.36■□□□□ 0.37
LETMD1-209ENST00000547318 CPA1P15085 419 aa17.36■□□□□ 0.37
LETMD1-209ENST00000547318 PTPN12Q05209 780 aaKnown RBP17.36■□□□□ 0.37
LETMD1-209ENST00000547318 ST3GAL1Q11201 340 aa17.36■□□□□ 0.37
LETMD1-209ENST00000547318 HSP90AA2PQ14568 343 aaPredicted RBP17.36■□□□□ 0.37
LETMD1-209ENST00000547318 ZNF496Q96IT1 587 aaPredicted RBP17.36■□□□□ 0.37
LETMD1-209ENST00000547318 MAP7D2Q96T17 732 aa17.36■□□□□ 0.37
LETMD1-209ENST00000547318 HAUS7Q99871 368 aa17.36■□□□□ 0.37
LETMD1-209ENST00000547318 SH3TC1Q8TE82 1336 aa17.36■□□□□ 0.37
LETMD1-209ENST00000547318 VPS37CA5D8V6 355 aaPredicted RBP17.35■□□□□ 0.37
LETMD1-209ENST00000547318 ATF3P18847 181 aa17.35■□□□□ 0.37
LETMD1-209ENST00000547318 DNM1Q05193 864 aaKnown RBP17.35■□□□□ 0.37
LETMD1-209ENST00000547318 KDM4AO75164 1064 aa17.35■□□□□ 0.37
LETMD1-209ENST00000547318 MYL6BP14649 208 aa17.35■□□□□ 0.37
LETMD1-209ENST00000547318 LLPHQ9BRT6 129 aaKnown RBP17.35■□□□□ 0.37
LETMD1-209ENST00000547318 TLR7Q9NYK1 1049 aaKnown RBP17.35■□□□□ 0.37
LETMD1-209ENST00000547318 USP25Q9UHP3 1055 aa17.35■□□□□ 0.37
LETMD1-209ENST00000547318 SLC39A6Q13433 755 aa17.34■□□□□ 0.37
LETMD1-209ENST00000547318 FOXD4L6Q3SYB3 417 aaPredicted RBP17.34■□□□□ 0.37
LETMD1-209ENST00000547318 FOXD4L3Q6VB84 417 aaPredicted RBP17.34■□□□□ 0.37
LETMD1-209ENST00000547318 UBR2Q8IWV8 1755 aa17.34■□□□□ 0.37
LETMD1-209ENST00000547318 SIL1Q9H173 461 aa17.34■□□□□ 0.37
LETMD1-209ENST00000547318 DDX19AQ9NUU7 478 aaKnown RBP17.34■□□□□ 0.37
LETMD1-209ENST00000547318 KIF3AQ9Y496 699 aa17.34■□□□□ 0.37
LETMD1-209ENST00000547318 TRHP20396 242 aaPredicted RBP17.33■□□□□ 0.37
LETMD1-209ENST00000547318 ZC3H6P61129 1189 aaKnown RBP17.33■□□□□ 0.37
LETMD1-209ENST00000547318 MCMDC2Q4G0Z9 681 aa17.33■□□□□ 0.37
LETMD1-209ENST00000547318 MTERF4Q7Z6M4 381 aaKnown RBP17.33■□□□□ 0.37
LETMD1-209ENST00000547318 ZSCAN16Q9H4T2 348 aaPredicted RBP17.33■□□□□ 0.37
LETMD1-209ENST00000547318 ATG3Q9NT62 314 aa17.33■□□□□ 0.37
LETMD1-209ENST00000547318 DBNLQ9UJU6 430 aaKnown RBP17.33■□□□□ 0.37
LETMD1-209ENST00000547318 NUP188Q5SRE5 1749 aa17.33■□□□□ 0.36
LETMD1-209ENST00000547318 GOLGA6L6A8MZA4 724 aa17.33■□□□□ 0.36
LETMD1-209ENST00000547318 CAVIN2O95810 425 aa17.33■□□□□ 0.36
LETMD1-209ENST00000547318 TOB2Q14106 344 aaPredicted RBP17.33■□□□□ 0.36
LETMD1-209ENST00000547318 SASS6Q6UVJ0 657 aa17.33■□□□□ 0.36
LETMD1-209ENST00000547318 NEK1Q96PY6 1258 aa17.33■□□□□ 0.36
LETMD1-209ENST00000547318 PAPPAQ13219 1627 aa17.33■□□□□ 0.36
LETMD1-209ENST00000547318 CASP7P55210 303 aa17.32■□□□□ 0.36
LETMD1-209ENST00000547318 EPHA10Q5JZY3 1008 aa17.32■□□□□ 0.36
LETMD1-209ENST00000547318 UBE2Q2Q8WVN8 375 aa17.32■□□□□ 0.36
LETMD1-209ENST00000547318 HELLSQ9NRZ9 838 aa17.32■□□□□ 0.36
LETMD1-209ENST00000547318 CSB-PGBD3P0DP91 1061 aa17.31■□□□□ 0.36
LETMD1-209ENST00000547318 HCLS1P14317 486 aaPredicted RBP17.31■□□□□ 0.36
LETMD1-209ENST00000547318 CABP4P57796 275 aa17.31■□□□□ 0.36
LETMD1-209ENST00000547318 MAP3K11Q16584 847 aa17.31■□□□□ 0.36
LETMD1-209ENST00000547318 ATL3Q6DD88 541 aa17.31■□□□□ 0.36
LETMD1-209ENST00000547318 KBTBD3Q8NAB2 608 aa17.31■□□□□ 0.36
LETMD1-209ENST00000547318 PIBF1Q8WXW3 757 aa17.31■□□□□ 0.36
LETMD1-209ENST00000547318 GTF3C6Q969F1 213 aa17.31■□□□□ 0.36
LETMD1-209ENST00000547318 PDCL3Q9H2J4 239 aa17.31■□□□□ 0.36
LETMD1-209ENST00000547318 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.31■□□□□ 0.364e-7■■■■□ 21.7
LETMD1-209ENST00000547318 DYNC1I1O14576 645 aa17.31■□□□□ 0.36
LETMD1-209ENST00000547318 ADCY5O95622 1261 aa17.31■□□□□ 0.36
LETMD1-209ENST00000547318 TFCP2Q12800 502 aa17.31■□□□□ 0.36
LETMD1-209ENST00000547318 LRRFIP1Q32MZ4 808 aaKnown RBP17.31■□□□□ 0.36
LETMD1-209ENST00000547318 CADPS2Q86UW7 1296 aa17.31■□□□□ 0.36
LETMD1-209ENST00000547318 NECAB1Q8N987 351 aa17.31■□□□□ 0.36
LETMD1-209ENST00000547318 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.31■□□□□ 0.36
LETMD1-209ENST00000547318 LARP6Q9BRS8 491 aaKnown RBP17.31■□□□□ 0.36
LETMD1-209ENST00000547318 DSCC1Q9BVC3 393 aa17.31■□□□□ 0.36
LETMD1-209ENST00000547318 NUP62CLQ9H1M0 184 aa17.31■□□□□ 0.36
LETMD1-209ENST00000547318 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.31■□□□□ 0.36
LETMD1-209ENST00000547318 A0A087WZG4 1122 aa17.3■□□□□ 0.36
LETMD1-209ENST00000547318 H7C1W4 665 aa17.3■□□□□ 0.36
LETMD1-209ENST00000547318 UBE3BQ7Z3V4 1068 aa17.3■□□□□ 0.36
LETMD1-209ENST00000547318 ZNF589Q86UQ0 364 aaPredicted RBP17.3■□□□□ 0.36
LETMD1-209ENST00000547318 FBXO3Q9UK99 471 aa17.3■□□□□ 0.36
LETMD1-209ENST00000547318 USP16Q9Y5T5 823 aa17.3■□□□□ 0.36
LETMD1-209ENST00000547318 ZNF609O15014 1411 aa17.3■□□□□ 0.36
LETMD1-209ENST00000547318 GOLGA6L4A6NEF3 574 aa17.3■□□□□ 0.36
LETMD1-209ENST00000547318 CYP27B1O15528 508 aa17.3■□□□□ 0.36
LETMD1-209ENST00000547318 HMGN5P82970 282 aaKnown RBP17.3■□□□□ 0.36
LETMD1-209ENST00000547318 RBM43Q6ZSC3 357 aaKnown RBP17.3■□□□□ 0.36
LETMD1-209ENST00000547318 TTC6Q86TZ1 520 aa17.3■□□□□ 0.36
LETMD1-209ENST00000547318 FAM200AQ8TCP9 573 aa17.3■□□□□ 0.36
LETMD1-209ENST00000547318 PRIMPOLQ96LW4 560 aa17.3■□□□□ 0.36
LETMD1-209ENST00000547318 PCDH11XQ9BZA7 1347 aa17.29■□□□□ 0.36
LETMD1-209ENST00000547318 PCDH11YQ9BZA8 1340 aa17.29■□□□□ 0.36
LETMD1-209ENST00000547318 CIAO1O76071 339 aa17.29■□□□□ 0.36
LETMD1-209ENST00000547318 IL15P40933 162 aaPredicted RBP17.29■□□□□ 0.36
LETMD1-209ENST00000547318 CDC37L1Q7L3B6 337 aa17.29■□□□□ 0.36
LETMD1-209ENST00000547318 SPATA32Q96LK8 384 aa17.29■□□□□ 0.36
LETMD1-209ENST00000547318 CFAP45Q9UL16 551 aa17.29■□□□□ 0.36
LETMD1-209ENST00000547318 R3HCC1Q9Y3T6 440 aaKnown RBP17.29■□□□□ 0.36
LETMD1-209ENST00000547318 TJP1Q07157 1748 aa17.28■□□□□ 0.36
LETMD1-209ENST00000547318 ERVV-2B6SEH9 535 aa17.28■□□□□ 0.36
LETMD1-209ENST00000547318 NAA16Q6N069 864 aaPredicted RBP17.28■□□□□ 0.36
LETMD1-209ENST00000547318 KLHDC4Q8TBB5 520 aa17.28■□□□□ 0.36
LETMD1-209ENST00000547318 CWC25Q9NXE8 425 aaPredicted RBP17.28■□□□□ 0.36
LETMD1-209ENST00000547318 SPATA31A3Q5VYP0 1347 aa17.27■□□□□ 0.36
LETMD1-209ENST00000547318 GIMAP6Q6P9H5 292 aa17.27■□□□□ 0.36
LETMD1-209ENST00000547318 FBXL16Q8N461 479 aa17.27■□□□□ 0.36
LETMD1-209ENST00000547318 CCDC191Q8NCU4 936 aa17.27■□□□□ 0.36
LETMD1-209ENST00000547318 SPTLC3Q9NUV7 552 aa17.27■□□□□ 0.36
LETMD1-209ENST00000547318 ABCC12Q96J65 1359 aa17.27■□□□□ 0.36
LETMD1-209ENST00000547318 RGS22Q8NE09 1264 aa17.26■□□□□ 0.35
LETMD1-209ENST00000547318 SMARCC2Q8TAQ2 1214 aa17.26■□□□□ 0.35
LETMD1-209ENST00000547318 AGXT2Q9BYV1 514 aa17.26■□□□□ 0.35
LETMD1-209ENST00000547318 PFKFB2O60825 505 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms