RNA–Protein interactions for RNA: ENST00000547188.1

PRDM4-202, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-202ENST00000547188 COL3A1P02461 1466 aaPredicted RBP31.57■■■□□ 2.64
PRDM4-202ENST00000547188 LAMB4A4D0S4 1761 aa31.56■■■□□ 2.64
PRDM4-202ENST00000547188 ABCC4O15439 1325 aa31.56■■■□□ 2.64
PRDM4-202ENST00000547188 MAP3K15Q6ZN16 1313 aa31.56■■■□□ 2.64
PRDM4-202ENST00000547188 ERVV-1B6SEH8 477 aa31.56■■■□□ 2.64
PRDM4-202ENST00000547188 TTLL7Q6ZT98 887 aa31.56■■■□□ 2.64
PRDM4-202ENST00000547188 MCM10Q7L590 875 aa31.56■■■□□ 2.64
PRDM4-202ENST00000547188 RBM26Q5T8P6 1007 aaKnown RBP31.55■■■□□ 2.64
PRDM4-202ENST00000547188 MPNDQ8N594 471 aa31.55■■■□□ 2.64
PRDM4-202ENST00000547188 IBTKQ9P2D0 1353 aaPredicted RBP31.55■■■□□ 2.64
PRDM4-202ENST00000547188 NTSR2O95665 410 aa31.54■■■□□ 2.64
PRDM4-202ENST00000547188 ZNF296Q8WUU4 475 aaPredicted RBP31.54■■■□□ 2.64
PRDM4-202ENST00000547188 ZBTB3Q9H5J0 574 aa31.54■■■□□ 2.64
PRDM4-202ENST00000547188 TAF1P21675 1872 aa31.53■■■□□ 2.64
PRDM4-202ENST00000547188 TBC1D8O95759 1140 aa31.53■■■□□ 2.64
PRDM4-202ENST00000547188 DCPSQ96C86 337 aaKnown RBP31.53■■■□□ 2.64
PRDM4-202ENST00000547188 NLRP3Q96P20 1036 aa31.52■■■□□ 2.64
PRDM4-202ENST00000547188 LAMB2P55268 1798 aa31.51■■■□□ 2.64
PRDM4-202ENST00000547188 EIF4G2P78344 907 aaKnown RBP eCLIP31.51■■■□□ 2.63
PRDM4-202ENST00000547188 KIF6Q6ZMV9 814 aa31.51■■■□□ 2.63
PRDM4-202ENST00000547188 RASAL3Q86YV0 1011 aa31.51■■■□□ 2.63
PRDM4-202ENST00000547188 PRKAR2BP31323 418 aa31.5■■■□□ 2.63
PRDM4-202ENST00000547188 DCTN1Q14203 1278 aa31.5■■■□□ 2.63
PRDM4-202ENST00000547188 CC2D1BQ5T0F9 858 aaKnown RBP31.5■■■□□ 2.63
PRDM4-202ENST00000547188 ZNF34Q8IZ26 560 aa31.5■■■□□ 2.63
PRDM4-202ENST00000547188 RRP7AQ9Y3A4 280 aaKnown RBP31.5■■■□□ 2.63
PRDM4-202ENST00000547188 PSMD14O00487 310 aa31.49■■■□□ 2.63
PRDM4-202ENST00000547188 FXR1P51114 621 aaKnown RBP eCLIP31.49■■■□□ 2.63
PRDM4-202ENST00000547188 SP8Q8IXZ3 490 aa31.49■■■□□ 2.63
PRDM4-202ENST00000547188 DPF2Q92785 391 aa31.48■■■□□ 2.63
PRDM4-202ENST00000547188 REM2Q8IYK8 340 aaPredicted RBP31.47■■■□□ 2.63
PRDM4-202ENST00000547188 MIS18AQ9NYP9 233 aa31.47■■■□□ 2.63
PRDM4-202ENST00000547188 MKI67P46013 3256 aaKnown RBP31.46■■■□□ 2.63
PRDM4-202ENST00000547188 MYL6BP14649 208 aa31.46■■■□□ 2.63
PRDM4-202ENST00000547188 FBXO46Q6PJ61 603 aaPredicted RBP31.46■■■□□ 2.63
PRDM4-202ENST00000547188 RTF1Q92541 710 aaKnown RBP31.46■■■□□ 2.63
PRDM4-202ENST00000547188 CDCA5Q96FF9 252 aa31.45■■■□□ 2.63
PRDM4-202ENST00000547188 DUOX1Q9NRD9 1551 aa31.45■■■□□ 2.63
PRDM4-202ENST00000547188 ASTN2O75129 1339 aaPredicted RBP31.45■■■□□ 2.62
PRDM4-202ENST00000547188 BBOX1O75936 387 aa31.44■■■□□ 2.62
PRDM4-202ENST00000547188 CNGB1Q14028 1251 aaPredicted RBP31.44■■■□□ 2.62
PRDM4-202ENST00000547188 PPP1R42Q7Z4L9 355 aa31.44■■■□□ 2.62
PRDM4-202ENST00000547188 DBNDD1Q9H9R9 158 aa31.44■■■□□ 2.62
PRDM4-202ENST00000547188 ANKRD36CQ5JPF3 1778 aa31.43■■■□□ 2.62
PRDM4-202ENST00000547188 SULF1Q8IWU6 871 aa31.43■■■□□ 2.62
PRDM4-202ENST00000547188 RSPH6AQ9H0K4 717 aa31.43■■■□□ 2.62
PRDM4-202ENST00000547188 GGA3Q9NZ52 723 aa31.43■■■□□ 2.62
PRDM4-202ENST00000547188 KCNQ5Q9NR82 932 aa31.41■■■□□ 2.62
PRDM4-202ENST00000547188 GPR25O00155 361 aa31.4■■■□□ 2.62
PRDM4-202ENST00000547188 KIF4BQ2VIQ3 1234 aa31.4■■■□□ 2.62
PRDM4-202ENST00000547188 SLC10A5Q5PT55 438 aa31.4■■■□□ 2.62
PRDM4-202ENST00000547188 GIGYF2Q6Y7W6 1299 aaKnown RBP31.4■■■□□ 2.62
PRDM4-202ENST00000547188 UTP14AQ9BVJ6 771 aaKnown RBP31.39■■■□□ 2.62
PRDM4-202ENST00000547188 POTEFA5A3E0 1075 aa31.38■■■□□ 2.61
PRDM4-202ENST00000547188 MOB2Q70IA6 237 aa31.38■■■□□ 2.61
PRDM4-202ENST00000547188 RIMBP2O15034 1052 aa31.37■■■□□ 2.61
PRDM4-202ENST00000547188 HCLS1P14317 486 aaPredicted RBP31.37■■■□□ 2.61
PRDM4-202ENST00000547188 TAF7Q15545 349 aaPredicted RBP31.37■■■□□ 2.61
PRDM4-202ENST00000547188 PARP10Q53GL7 1025 aa31.37■■■□□ 2.61
PRDM4-202ENST00000547188 KIAA0100Q14667 2235 aaKnown RBP31.37■■■□□ 2.61
PRDM4-202ENST00000547188 PAPPA2Q9BXP8 1791 aa31.36■■■□□ 2.61
PRDM4-202ENST00000547188 WASHC4Q2M389 1173 aa31.36■■■□□ 2.61
PRDM4-202ENST00000547188 RTL9Q8NET4 1388 aa31.35■■■□□ 2.61
PRDM4-202ENST00000547188 RPS12P25398 132 aaKnown RBP31.35■■■□□ 2.61
PRDM4-202ENST00000547188 SCN9AQ15858 1988 aa31.34■■■□□ 2.61
PRDM4-202ENST00000547188 GRAPQ13588 217 aa31.34■■■□□ 2.61
PRDM4-202ENST00000547188 DDX46Q7L014 1031 aaKnown RBP31.34■■■□□ 2.61
PRDM4-202ENST00000547188 GRAPLQ8TC17 118 aaPredicted RBP31.34■■■□□ 2.61
PRDM4-202ENST00000547188 TIMELESSQ9UNS1 1208 aa31.34■■■□□ 2.61
PRDM4-202ENST00000547188 LRRC37AA6NMS7 1700 aa31.34■■■□□ 2.61
PRDM4-202ENST00000547188 DOK7Q18PE1 504 aa31.33■■■□□ 2.61
PRDM4-202ENST00000547188 R3HDMLQ9H3Y0 253 aa31.33■■■□□ 2.61
PRDM4-202ENST00000547188 KDM3BQ7LBC6 1761 aa31.33■■■□□ 2.61
PRDM4-202ENST00000547188 PER1O15534 1290 aaPredicted RBP31.32■■■□□ 2.6
PRDM4-202ENST00000547188 ANGEL2Q5VTE6 544 aaKnown RBP31.32■■■□□ 2.6
PRDM4-202ENST00000547188 UBE2Q2LH0YL09 131 aa31.31■■■□□ 2.6
PRDM4-202ENST00000547188 ECE2O60344 883 aa31.31■■■□□ 2.6
PRDM4-202ENST00000547188 FKTNO75072 461 aa31.31■■■□□ 2.6
PRDM4-202ENST00000547188 MKRN3Q13064 507 aaKnown RBP31.31■■■□□ 2.6
PRDM4-202ENST00000547188 SCAF8Q9UPN6 1271 aaKnown RBP31.31■■■□□ 2.6
PRDM4-202ENST00000547188 DDX60Q8IY21 1712 aaKnown RBP31.29■■■□□ 2.6
PRDM4-202ENST00000547188 FKBP1BP68106 108 aa31.29■■■□□ 2.6
PRDM4-202ENST00000547188 NOM1Q5C9Z4 860 aaKnown RBP31.29■■■□□ 2.6
PRDM4-202ENST00000547188 THUMPD2Q9BTF0 503 aaKnown RBP31.29■■■□□ 2.6
PRDM4-202ENST00000547188 NSFL1CQ9UNZ2 370 aaKnown RBP31.29■■■□□ 2.6
PRDM4-202ENST00000547188 TRIOBPQ9H2D6 2365 aa31.28■■■□□ 2.6
PRDM4-202ENST00000547188 C6orf229H3BNL8 230 aa31.28■■■□□ 2.6
PRDM4-202ENST00000547188 TM4SF4P48230 202 aa31.28■■■□□ 2.6
PRDM4-202ENST00000547188 SCARF1Q14162 830 aa31.28■■■□□ 2.6
PRDM4-202ENST00000547188 COLQQ9Y215 455 aaPredicted RBP31.28■■■□□ 2.6
PRDM4-202ENST00000547188 POLLQ9UGP5 575 aa31.27■■■□□ 2.6
PRDM4-202ENST00000547188 HTTP42858 3142 aa31.27■■■□□ 2.6
PRDM4-202ENST00000547188 RBBP6Q7Z6E9 1792 aaKnown RBP31.27■■■□□ 2.6
PRDM4-202ENST00000547188 EIF4A1P60842 406 aaKnown RBP31.26■■■□□ 2.59
PRDM4-202ENST00000547188 ZNF428Q96B54 188 aa31.25■■■□□ 2.59
PRDM4-202ENST00000547188 HTATSF1O43719 755 aaKnown RBP31.24■■■□□ 2.59
PRDM4-202ENST00000547188 PRAMEF18Q5VWM3 479 aa31.24■■■□□ 2.59
PRDM4-202ENST00000547188 CEP290O15078 2479 aa31.24■■■□□ 2.59
PRDM4-202ENST00000547188 TRIM17Q9Y577 477 aa31.23■■■□□ 2.59
PRDM4-202ENST00000547188 DLG5Q8TDM6 1919 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms