RNA–Protein interactions for RNA: ENST00000547179.1

LINC00485-201, long intergenic non-protein coding RNA 485, humanhuman

TSL 1 (best) BASIC

Gene LINC00485, Length 3,722 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00485-201ENST00000547179 CSF1RP07333 972 aa13.62□□□□□ -0.23
LINC00485-201ENST00000547179 PTPN12Q05209 780 aaKnown RBP13.62□□□□□ -0.23
LINC00485-201ENST00000547179 OSBPL3Q9H4L5 887 aa13.62□□□□□ -0.23
LINC00485-201ENST00000547179 SRP68Q9UHB9 627 aaKnown RBP13.62□□□□□ -0.23
LINC00485-201ENST00000547179 LDHAL6AQ6ZMR3 332 aa13.62□□□□□ -0.23
LINC00485-201ENST00000547179 UBN2Q6ZU65 1347 aa13.62□□□□□ -0.23
LINC00485-201ENST00000547179 LY75O60449 1722 aa13.62□□□□□ -0.23
LINC00485-201ENST00000547179 ITGA6P23229 1130 aa13.62□□□□□ -0.23
LINC00485-201ENST00000547179 ST5P78524 1137 aa13.62□□□□□ -0.23
LINC00485-201ENST00000547179 TTLL11Q8NHH1 800 aa13.62□□□□□ -0.23
LINC00485-201ENST00000547179 ECHDC1Q9NTX5 307 aa13.62□□□□□ -0.23
LINC00485-201ENST00000547179 NUTM1Q86Y26 1132 aa13.61□□□□□ -0.23
LINC00485-201ENST00000547179 C16orf71Q8IYS4 520 aaPredicted RBP13.61□□□□□ -0.23
LINC00485-201ENST00000547179 NLGN1Q8N2Q7 840 aa13.61□□□□□ -0.23
LINC00485-201ENST00000547179 CCDC85AQ96PX6 553 aaPredicted RBP13.61□□□□□ -0.23
LINC00485-201ENST00000547179 GPR108Q9NPR9 543 aa13.61□□□□□ -0.23
LINC00485-201ENST00000547179 NTSR2O95665 410 aa13.61□□□□□ -0.23
LINC00485-201ENST00000547179 HCLS1P14317 486 aaPredicted RBP13.61□□□□□ -0.23
LINC00485-201ENST00000547179 STAP2Q9UGK3 403 aa13.61□□□□□ -0.23
LINC00485-201ENST00000547179 MYH14Q7Z406 1995 aaKnown RBP13.61□□□□□ -0.23
LINC00485-201ENST00000547179 CARMIL3Q8ND23 1372 aa13.61□□□□□ -0.23
LINC00485-201ENST00000547179 NUP98P52948 1817 aa13.61□□□□□ -0.23
LINC00485-201ENST00000547179 C4BP0C0L5 1744 aa13.61□□□□□ -0.23
LINC00485-201ENST00000547179 TBC1D9BQ66K14 1250 aa13.61□□□□□ -0.23
LINC00485-201ENST00000547179 CNTROBQ8N137 903 aa13.61□□□□□ -0.23
LINC00485-201ENST00000547179 RFX5P48382 616 aaPredicted RBP13.6□□□□□ -0.23
LINC00485-201ENST00000547179 METTL24Q5JXM2 366 aa13.6□□□□□ -0.23
LINC00485-201ENST00000547179 CCDC125Q86Z20 511 aa13.6□□□□□ -0.23
LINC00485-201ENST00000547179 CNBD1Q8NA66 436 aa13.6□□□□□ -0.23
LINC00485-201ENST00000547179 NEUROD6Q96NK8 337 aa13.6□□□□□ -0.23
LINC00485-201ENST00000547179 ANKRD36CQ5JPF3 1778 aa13.6□□□□□ -0.23
LINC00485-201ENST00000547179 KLHDC4Q8TBB5 520 aa13.6□□□□□ -0.23
LINC00485-201ENST00000547179 RILPL2Q969X0 211 aa13.59□□□□□ -0.23
LINC00485-201ENST00000547179 RBM19Q9Y4C8 960 aaKnown RBP13.59□□□□□ -0.23
LINC00485-201ENST00000547179 TFCP2Q12800 502 aa13.59□□□□□ -0.23
LINC00485-201ENST00000547179 CCDC158Q5M9N0 1113 aa13.58□□□□□ -0.24
LINC00485-201ENST00000547179 SLC10A5Q5PT55 438 aa13.58□□□□□ -0.24
LINC00485-201ENST00000547179 DDX46Q7L014 1031 aaKnown RBP13.58□□□□□ -0.24
LINC00485-201ENST00000547179 ANKRD18AQ8IVF6 992 aa13.58□□□□□ -0.24
LINC00485-201ENST00000547179 GREM2Q9H772 168 aa13.58□□□□□ -0.24
LINC00485-201ENST00000547179 SASH1O94885 1247 aa13.58□□□□□ -0.24
LINC00485-201ENST00000547179 ERFEQ4G0M1 354 aa13.58□□□□□ -0.24
LINC00485-201ENST00000547179 TNNI3KQ59H18 835 aa13.58□□□□□ -0.24
LINC00485-201ENST00000547179 FPGT-TNNI3KV9GXZ4 949 aa13.58□□□□□ -0.24
LINC00485-201ENST00000547179 LRRFIP1Q32MZ4 808 aaKnown RBP13.57□□□□□ -0.24
LINC00485-201ENST00000547179 CCDC8Q9H0W5 538 aaPredicted RBP13.57□□□□□ -0.24
LINC00485-201ENST00000547179 DAXXQ9UER7 740 aaPredicted RBP13.57□□□□□ -0.24
LINC00485-201ENST00000547179 MROH5Q6ZUA9 1318 aa13.57□□□□□ -0.24
LINC00485-201ENST00000547179 HIP1O00291 1037 aa13.57□□□□□ -0.24
LINC00485-201ENST00000547179 C8orf34Q49A92 452 aa13.57□□□□□ -0.24
LINC00485-201ENST00000547179 OTUD7AQ8TE49 926 aaPredicted RBP13.57□□□□□ -0.24
LINC00485-201ENST00000547179 BCL2L12Q9HB09 334 aa13.57□□□□□ -0.24
LINC00485-201ENST00000547179 RUFY2Q8WXA3 655 aa13.57□□□□□ -0.24
LINC00485-201ENST00000547179 ZNF594Q96JF6 807 aaPredicted RBP13.57□□□□□ -0.24
LINC00485-201ENST00000547179 RTL9Q8NET4 1388 aa13.57□□□□□ -0.24
LINC00485-201ENST00000547179 NFIXQ14938 502 aa13.56□□□□□ -0.24
LINC00485-201ENST00000547179 SF3B3Q15393 1217 aaKnown RBP13.56□□□□□ -0.24
LINC00485-201ENST00000547179 SYNE4Q8N205 404 aa13.56□□□□□ -0.24
LINC00485-201ENST00000547179 PARP3Q9Y6F1 533 aa13.56□□□□□ -0.24
LINC00485-201ENST00000547179 TMX4Q9H1E5 349 aaPredicted RBP13.56□□□□□ -0.24
LINC00485-201ENST00000547179 REC8O95072 547 aa13.56□□□□□ -0.24
LINC00485-201ENST00000547179 EN1Q05925 392 aaPredicted RBP13.56□□□□□ -0.24
LINC00485-201ENST00000547179 RPGRQ92834 1020 aaKnown RBP13.56□□□□□ -0.24
LINC00485-201ENST00000547179 SERPINB2P05120 415 aa13.55□□□□□ -0.24
LINC00485-201ENST00000547179 GYS1P13807 737 aa13.55□□□□□ -0.24
LINC00485-201ENST00000547179 PROM2Q8N271 834 aa13.55□□□□□ -0.24
LINC00485-201ENST00000547179 EAF2Q96CJ1 260 aaPredicted RBP13.55□□□□□ -0.24
LINC00485-201ENST00000547179 DDRGK1Q96HY6 314 aa13.55□□□□□ -0.24
LINC00485-201ENST00000547179 TAF1LQ8IZX4 1826 aa13.55□□□□□ -0.24
LINC00485-201ENST00000547179 IFIT1P09914 478 aaKnown RBP13.55□□□□□ -0.24
LINC00485-201ENST00000547179 SLC5A1P13866 664 aa13.55□□□□□ -0.24
LINC00485-201ENST00000547179 SDSP20132 328 aa13.55□□□□□ -0.24
LINC00485-201ENST00000547179 ATP2B3Q16720 1220 aa13.55□□□□□ -0.24
LINC00485-201ENST00000547179 MFAP1P55081 439 aaKnown RBP13.55□□□□□ -0.24
LINC00485-201ENST00000547179 AKT1S1Q96B36 256 aa13.55□□□□□ -0.24
LINC00485-201ENST00000547179 TTC39AQ5SRH9 613 aa13.54□□□□□ -0.24
LINC00485-201ENST00000547179 SMIM5Q71RC9 77 aa13.54□□□□□ -0.24
LINC00485-201ENST00000547179 EVI5LQ96CN4 794 aa13.54□□□□□ -0.24
LINC00485-201ENST00000547179 LRRC24Q50LG9 513 aa13.54□□□□□ -0.24
LINC00485-201ENST00000547179 DIAPH3Q9NSV4 1193 aa13.54□□□□□ -0.24
LINC00485-201ENST00000547179 SCN7AQ01118 1682 aa13.54□□□□□ -0.24
LINC00485-201ENST00000547179 BCORQ6W2J9 1755 aa13.54□□□□□ -0.24
LINC00485-201ENST00000547179 KCNJ4P48050 445 aa13.54□□□□□ -0.24
LINC00485-201ENST00000547179 EZH2Q15910 746 aaKnown RBP13.54□□□□□ -0.24
LINC00485-201ENST00000547179 ATG9AQ7Z3C6 839 aa13.54□□□□□ -0.24
LINC00485-201ENST00000547179 SLC15A2Q16348 729 aa13.53□□□□□ -0.24
LINC00485-201ENST00000547179 KIAA1211Q6ZU35 1233 aa13.53□□□□□ -0.24
LINC00485-201ENST00000547179 A0A1B0GUL7 405 aa13.53□□□□□ -0.24
LINC00485-201ENST00000547179 MCCP23508 829 aa13.53□□□□□ -0.24
LINC00485-201ENST00000547179 ANKRD2Q9GZV1 360 aa13.53□□□□□ -0.24
LINC00485-201ENST00000547179 SALL3Q9BXA9 1300 aa13.53□□□□□ -0.24
LINC00485-201ENST00000547179 ATP5JP18859 108 aa13.53□□□□□ -0.24
LINC00485-201ENST00000547179 PUM3Q15397 648 aaKnown RBP13.53□□□□□ -0.24
LINC00485-201ENST00000547179 RBM17Q96I25 401 aaKnown RBP13.53□□□□□ -0.24
LINC00485-201ENST00000547179 CAMKK2Q96RR4 588 aa13.53□□□□□ -0.24
LINC00485-201ENST00000547179 PUS3Q9BZE2 481 aaKnown RBP13.53□□□□□ -0.24
LINC00485-201ENST00000547179 GSPT1P15170 499 aaKnown RBP13.52□□□□□ -0.24
LINC00485-201ENST00000547179 GNL3LQ9NVN8 582 aaKnown RBP13.52□□□□□ -0.24
LINC00485-201ENST00000547179 RPS8P62241 208 aaKnown RBP13.52□□□□□ -0.25
LINC00485-201ENST00000547179 ZNF827Q17R98 1081 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms