RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 DCTPP1Q9H773 170 aa19.67■□□□□ 0.74
TRAFD1-203ENST00000547063 KDM2BQ8NHM5 1336 aa19.67■□□□□ 0.74
TRAFD1-203ENST00000547063 NRXN2Q9P2S2 1712 aa19.67■□□□□ 0.74
TRAFD1-203ENST00000547063 IFIT5Q13325 482 aaKnown RBP19.66■□□□□ 0.74
TRAFD1-203ENST00000547063 SF3B3Q15393 1217 aaKnown RBP19.66■□□□□ 0.74
TRAFD1-203ENST00000547063 SMC5Q8IY18 1101 aa19.66■□□□□ 0.74
TRAFD1-203ENST00000547063 MTFR1LQ9H019 292 aa19.66■□□□□ 0.74
TRAFD1-203ENST00000547063 RTL9Q8NET4 1388 aa19.66■□□□□ 0.74
TRAFD1-203ENST00000547063 CASZ1Q86V15 1759 aa19.65■□□□□ 0.74
TRAFD1-203ENST00000547063 ZBTB47Q9UFB7 747 aaPredicted RBP19.65■□□□□ 0.74
TRAFD1-203ENST00000547063 ABCC12Q96J65 1359 aa19.65■□□□□ 0.74
TRAFD1-203ENST00000547063 ANKRD18BA2A2Z9 1011 aa19.64■□□□□ 0.73
TRAFD1-203ENST00000547063 COPRSQ9NQ92 184 aa19.64■□□□□ 0.73
TRAFD1-203ENST00000547063 FBXO3Q9UK99 471 aa19.64■□□□□ 0.73
TRAFD1-203ENST00000547063 NOP58Q9Y2X3 529 aaKnown RBP19.64■□□□□ 0.73
TRAFD1-203ENST00000547063 RAB11FIP3O75154 756 aa19.63■□□□□ 0.73
TRAFD1-203ENST00000547063 SURF6O75683 361 aaKnown RBP19.63■□□□□ 0.73
TRAFD1-203ENST00000547063 TAF7LQ5H9L4 462 aa19.63■□□□□ 0.73
TRAFD1-203ENST00000547063 ERC1Q8IUD2 1116 aa19.63■□□□□ 0.73
TRAFD1-203ENST00000547063 BRIP1Q9BX63 1249 aa19.63■□□□□ 0.73
TRAFD1-203ENST00000547063 ITGA6P23229 1130 aa19.62■□□□□ 0.73
TRAFD1-203ENST00000547063 POLD1P28340 1107 aa19.62■□□□□ 0.73
TRAFD1-203ENST00000547063 RFX5P48382 616 aaPredicted RBP19.62■□□□□ 0.73
TRAFD1-203ENST00000547063 G3BP1Q13283 466 aaKnown RBP eCLIP19.62■□□□□ 0.73
TRAFD1-203ENST00000547063 FAM161AQ3B820 660 aa19.62■□□□□ 0.73
TRAFD1-203ENST00000547063 CDC5LQ99459 802 aaKnown RBP19.62■□□□□ 0.73
TRAFD1-203ENST00000547063 PDGFDQ9GZP0 370 aaPredicted RBP19.62■□□□□ 0.73
TRAFD1-203ENST00000547063 GREM2Q9H772 168 aa19.62■□□□□ 0.73
TRAFD1-203ENST00000547063 PDZRN3Q9UPQ7 1066 aa19.62■□□□□ 0.73
TRAFD1-203ENST00000547063 PDE6BP35913 854 aa19.61■□□□□ 0.73
TRAFD1-203ENST00000547063 OS9Q13438 667 aaPredicted RBP19.61■□□□□ 0.73
TRAFD1-203ENST00000547063 PTPN12Q05209 780 aaKnown RBP19.6■□□□□ 0.73
TRAFD1-203ENST00000547063 EXOC6BQ9Y2D4 811 aa19.6■□□□□ 0.73
TRAFD1-203ENST00000547063 KLRG2A4D1S0 409 aaPredicted RBP19.59■□□□□ 0.73
TRAFD1-203ENST00000547063 CIAO1O76071 339 aa19.59■□□□□ 0.73
TRAFD1-203ENST00000547063 ZBTB7AO95365 584 aa19.59■□□□□ 0.73
TRAFD1-203ENST00000547063 DDX46Q7L014 1031 aaKnown RBP19.59■□□□□ 0.73
TRAFD1-203ENST00000547063 RPGRQ92834 1020 aaKnown RBP19.59■□□□□ 0.73
TRAFD1-203ENST00000547063 CCDC85AQ96PX6 553 aaPredicted RBP19.59■□□□□ 0.73
TRAFD1-203ENST00000547063 PSDA5PKW4 1024 aaPredicted RBP19.58■□□□□ 0.72
TRAFD1-203ENST00000547063 IGHMBP2P38935 993 aaKnown RBP19.58■□□□□ 0.72
TRAFD1-203ENST00000547063 CRY2Q49AN0 593 aa19.58■□□□□ 0.72
TRAFD1-203ENST00000547063 CCDC24Q8N4L8 307 aa19.58■□□□□ 0.72
TRAFD1-203ENST00000547063 KIF1BPQ96EK5 621 aa19.58■□□□□ 0.72
TRAFD1-203ENST00000547063 LRRCC1Q9C099 1032 aa19.58■□□□□ 0.72
TRAFD1-203ENST00000547063 PA2G4Q9UQ80 394 aaKnown RBP19.58■□□□□ 0.72
TRAFD1-203ENST00000547063 TNRC6CQ9HCJ0 1690 aaKnown RBP19.57■□□□□ 0.72
TRAFD1-203ENST00000547063 EYA2O00167 538 aa19.57■□□□□ 0.72
TRAFD1-203ENST00000547063 IL15P40933 162 aaPredicted RBP19.57■□□□□ 0.72
TRAFD1-203ENST00000547063 NUCB1Q02818 461 aa19.57■□□□□ 0.72
TRAFD1-203ENST00000547063 ANKRD45Q5TZF3 282 aa19.57■□□□□ 0.72
TRAFD1-203ENST00000547063 LDHAL6AQ6ZMR3 332 aa19.57■□□□□ 0.72
TRAFD1-203ENST00000547063 ANKRD18AQ8IVF6 992 aa19.57■□□□□ 0.72
TRAFD1-203ENST00000547063 RBM17Q96I25 401 aaKnown RBP19.57■□□□□ 0.72
TRAFD1-203ENST00000547063 MPHOSPH8Q99549 860 aa19.57■□□□□ 0.72
TRAFD1-203ENST00000547063 C3orf67Q6ZVT6 689 aa19.56■□□□□ 0.72
TRAFD1-203ENST00000547063 SIL1Q9H173 461 aa19.56■□□□□ 0.72
TRAFD1-203ENST00000547063 HOXA10P31260 410 aaPredicted RBP19.55■□□□□ 0.72
TRAFD1-203ENST00000547063 CHD1LQ86WJ1 897 aa19.55■□□□□ 0.72
TRAFD1-203ENST00000547063 ANKRD31Q8N7Z5 1873 aa19.55■□□□□ 0.72
TRAFD1-203ENST00000547063 KLHDC4Q8TBB5 520 aa19.55■□□□□ 0.72
TRAFD1-203ENST00000547063 RHPN1Q8TCX5 695 aa19.55■□□□□ 0.72
TRAFD1-203ENST00000547063 ATF5Q9Y2D1 282 aaPredicted RBP19.55■□□□□ 0.72
TRAFD1-203ENST00000547063 C10orf71Q711Q0 1435 aa19.54■□□□□ 0.72
TRAFD1-203ENST00000547063 APBB1O00213 710 aa19.54■□□□□ 0.72
TRAFD1-203ENST00000547063 NPR1P16066 1061 aa19.54■□□□□ 0.72
TRAFD1-203ENST00000547063 RPS8P62241 208 aaKnown RBP19.54■□□□□ 0.72
TRAFD1-203ENST00000547063 ZNF594Q96JF6 807 aaPredicted RBP19.54■□□□□ 0.72
TRAFD1-203ENST00000547063 CRAMP1Q96RY5 1269 aa19.54■□□□□ 0.72
TRAFD1-203ENST00000547063 SEC31BQ9NQW1 1179 aa19.54■□□□□ 0.72
TRAFD1-203ENST00000547063 CNNM1Q9NRU3 951 aa19.54■□□□□ 0.72
TRAFD1-203ENST00000547063 H0YIN7 160 aa19.53■□□□□ 0.72
TRAFD1-203ENST00000547063 ALDH1B1P30837 517 aa19.53■□□□□ 0.72
TRAFD1-203ENST00000547063 GRAPQ13588 217 aa19.53■□□□□ 0.72
TRAFD1-203ENST00000547063 TMC4Q7Z404 712 aa19.53■□□□□ 0.72
TRAFD1-203ENST00000547063 CLASRPQ8N2M8 674 aaKnown RBP19.53■□□□□ 0.72
TRAFD1-203ENST00000547063 GRAPLQ8TC17 118 aaPredicted RBP19.53■□□□□ 0.72
TRAFD1-203ENST00000547063 BSDC1Q9NW68 430 aaPredicted RBP19.53■□□□□ 0.72
TRAFD1-203ENST00000547063 CEP126Q9P2H0 1117 aa19.53■□□□□ 0.72
TRAFD1-203ENST00000547063 LRP5O75197 1615 aa19.53■□□□□ 0.72
TRAFD1-203ENST00000547063 MROH5Q6ZUA9 1318 aa19.52■□□□□ 0.72
TRAFD1-203ENST00000547063 SRGNP10124 158 aa19.52■□□□□ 0.72
TRAFD1-203ENST00000547063 ATG9AQ7Z3C6 839 aa19.52■□□□□ 0.72
TRAFD1-203ENST00000547063 MASTLQ96GX5 879 aa19.52■□□□□ 0.72
TRAFD1-203ENST00000547063 SPON1Q9HCB6 807 aa19.52■□□□□ 0.72
TRAFD1-203ENST00000547063 SOCS7O14512 581 aa19.51■□□□□ 0.71
TRAFD1-203ENST00000547063 BBOX1O75936 387 aa19.51■□□□□ 0.71
TRAFD1-203ENST00000547063 AKAP2Q9Y2D5 859 aa19.51■□□□□ 0.71
TRAFD1-203ENST00000547063 RIPOR2Q9Y4F9 1068 aa19.51■□□□□ 0.71
TRAFD1-203ENST00000547063 SASH1O94885 1247 aa19.5■□□□□ 0.71
TRAFD1-203ENST00000547063 LRRC24Q50LG9 513 aa19.5■□□□□ 0.71
TRAFD1-203ENST00000547063 METTL24Q5JXM2 366 aa19.5■□□□□ 0.71
TRAFD1-203ENST00000547063 STYK1Q6J9G0 422 aa19.5■□□□□ 0.71
TRAFD1-203ENST00000547063 C2CD5Q86YS7 1000 aa19.5■□□□□ 0.71
TRAFD1-203ENST00000547063 SGIP1Q9BQI5 828 aa19.5■□□□□ 0.71
TRAFD1-203ENST00000547063 PUS3Q9BZE2 481 aaKnown RBP19.5■□□□□ 0.71
TRAFD1-203ENST00000547063 LNPKQ9C0E8 428 aa19.5■□□□□ 0.71
TRAFD1-203ENST00000547063 GPR108Q9NPR9 543 aa19.5■□□□□ 0.71
TRAFD1-203ENST00000547063 KIF13BQ9NQT8 1826 aa19.5■□□□□ 0.71
TRAFD1-203ENST00000547063 CELF1Q92879 486 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms