RNA–Protein interactions for RNA: ENST00000547034.5

TMTC3-202, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 1 (best)

Gene TMTC3, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-202ENST00000547034 CUL4AQ13619 759 aa20.74■□□□□ 0.91
TMTC3-202ENST00000547034 LRRC24Q50LG9 513 aa20.74■□□□□ 0.91
TMTC3-202ENST00000547034 DZIP3Q86Y13 1208 aaKnown RBP20.74■□□□□ 0.91
TMTC3-202ENST00000547034 ZNF34Q8IZ26 560 aa20.74■□□□□ 0.91
TMTC3-202ENST00000547034 FNBP4Q8N3X1 1017 aaPredicted RBP20.74■□□□□ 0.91
TMTC3-202ENST00000547034 TNPO1Q92973 898 aaKnown RBP20.74■□□□□ 0.91
TMTC3-202ENST00000547034 FSD1Q9BTV5 496 aa20.74■□□□□ 0.91
TMTC3-202ENST00000547034 CCDC9Q9Y3X0 531 aaKnown RBP20.74■□□□□ 0.91
TMTC3-202ENST00000547034 PTH1RQ03431 593 aa20.74■□□□□ 0.91
TMTC3-202ENST00000547034 CCDC57Q2TAC2 916 aa20.74■□□□□ 0.91
TMTC3-202ENST00000547034 SMARCC1Q92922 1105 aaPredicted RBP20.74■□□□□ 0.91
TMTC3-202ENST00000547034 ACSBG1Q96GR2 724 aa20.74■□□□□ 0.91
TMTC3-202ENST00000547034 ZNF594Q96JF6 807 aaPredicted RBP20.74■□□□□ 0.91
TMTC3-202ENST00000547034 FAM227BQ96M60 508 aa20.74■□□□□ 0.91
TMTC3-202ENST00000547034 FOXD4L1Q9NU39 408 aa20.74■□□□□ 0.91
TMTC3-202ENST00000547034 THSD7AQ9UPZ6 1657 aa20.73■□□□□ 0.91
TMTC3-202ENST00000547034 LRP5O75197 1615 aa20.73■□□□□ 0.91
TMTC3-202ENST00000547034 TMX3Q96JJ7 454 aa20.73■□□□□ 0.91
TMTC3-202ENST00000547034 CYP2E1P05181 493 aaPredicted RBP20.72■□□□□ 0.91
TMTC3-202ENST00000547034 CRKLP46109 303 aaKnown RBP20.72■□□□□ 0.91
TMTC3-202ENST00000547034 GSE1Q14687 1217 aa20.72■□□□□ 0.91
TMTC3-202ENST00000547034 NECTIN1Q15223 517 aa20.72■□□□□ 0.91
TMTC3-202ENST00000547034 RASEFQ8IZ41 740 aa20.72■□□□□ 0.91
TMTC3-202ENST00000547034 MAP4K1Q92918 833 aa20.72■□□□□ 0.91
TMTC3-202ENST00000547034 SPATA31A6Q5VVP1 1343 aa20.72■□□□□ 0.91
TMTC3-202ENST00000547034 BCORQ6W2J9 1755 aa20.72■□□□□ 0.91
TMTC3-202ENST00000547034 A0A0D9SFI3 127 aa20.71■□□□□ 0.91
TMTC3-202ENST00000547034 ATP6V1AP38606 617 aa20.71■□□□□ 0.91
TMTC3-202ENST00000547034 ITPK1Q13572 414 aa20.71■□□□□ 0.91
TMTC3-202ENST00000547034 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.71■□□□□ 0.91
TMTC3-202ENST00000547034 TTC14Q96N46 770 aa20.71■□□□□ 0.91
TMTC3-202ENST00000547034 PUS3Q9BZE2 481 aaKnown RBP20.71■□□□□ 0.91
TMTC3-202ENST00000547034 UBN2Q6ZU65 1347 aa20.71■□□□□ 0.91
TMTC3-202ENST00000547034 DDX11L8A8MPP1 907 aa20.71■□□□□ 0.91
TMTC3-202ENST00000547034 GPTP24298 496 aa20.71■□□□□ 0.91
TMTC3-202ENST00000547034 TTLL11Q8NHH1 800 aa20.71■□□□□ 0.91
TMTC3-202ENST00000547034 INTS4Q96HW7 963 aaKnown RBP20.71■□□□□ 0.91
TMTC3-202ENST00000547034 TM6SF1Q9BZW5 370 aa20.71■□□□□ 0.91
TMTC3-202ENST00000547034 LAMB2P55268 1798 aa20.7■□□□□ 0.9
TMTC3-202ENST00000547034 CTSWP56202 376 aa20.7■□□□□ 0.9
TMTC3-202ENST00000547034 NUCB2P80303 420 aa20.7■□□□□ 0.9
TMTC3-202ENST00000547034 IFIT5Q13325 482 aaKnown RBP20.7■□□□□ 0.9
TMTC3-202ENST00000547034 AK7Q96M32 723 aa20.7■□□□□ 0.9
TMTC3-202ENST00000547034 RIC1Q4ADV7 1423 aa20.7■□□□□ 0.9
TMTC3-202ENST00000547034 NGLY1Q96IV0 654 aa20.69■□□□□ 0.9
TMTC3-202ENST00000547034 GBP4Q96PP9 640 aa20.69■□□□□ 0.9
TMTC3-202ENST00000547034 ARXQ96QS3 562 aa20.69■□□□□ 0.9
TMTC3-202ENST00000547034 UPF3BQ9BZI7 483 aaKnown RBP20.69■□□□□ 0.9
TMTC3-202ENST00000547034 CEP126Q9P2H0 1117 aa20.69■□□□□ 0.9
TMTC3-202ENST00000547034 TBC1D2BQ9UPU7 963 aa20.69■□□□□ 0.9
TMTC3-202ENST00000547034 A0A1B0GUL7 405 aa20.69■□□□□ 0.9
TMTC3-202ENST00000547034 FAM98CQ17RN3 349 aaKnown RBP20.69■□□□□ 0.9
TMTC3-202ENST00000547034 KBTBD3Q8NAB2 608 aa20.69■□□□□ 0.9
TMTC3-202ENST00000547034 EDC3Q96F86 508 aaKnown RBP20.69■□□□□ 0.9
TMTC3-202ENST00000547034 C8orf37Q96NL8 207 aa20.69■□□□□ 0.9
TMTC3-202ENST00000547034 IRS4O14654 1257 aaPredicted RBP20.68■□□□□ 0.9
TMTC3-202ENST00000547034 PDE8AO60658 829 aa20.68■□□□□ 0.9
TMTC3-202ENST00000547034 CAMTA2O94983 1202 aa20.68■□□□□ 0.9
TMTC3-202ENST00000547034 SYNE4Q8N205 404 aa20.68■□□□□ 0.9
TMTC3-202ENST00000547034 ZGPATQ8N5A5 531 aaKnown RBP20.68■□□□□ 0.9
TMTC3-202ENST00000547034 AKAP2Q9Y2D5 859 aa20.68■□□□□ 0.9
TMTC3-202ENST00000547034 TIMM10P62072 90 aa20.67■□□□□ 0.9
TMTC3-202ENST00000547034 TRMT112Q9UI30 125 aaKnown RBP20.67■□□□□ 0.9
TMTC3-202ENST00000547034 RBM8AQ9Y5S9 174 aaKnown RBP20.67■□□□□ 0.9
TMTC3-202ENST00000547034 SSFA2P28290 1259 aa20.67■□□□□ 0.9
TMTC3-202ENST00000547034 NHSQ6T4R5 1651 aa20.67■□□□□ 0.9
TMTC3-202ENST00000547034 DDX60Q8IY21 1712 aaKnown RBP20.67■□□□□ 0.9
TMTC3-202ENST00000547034 ABCC12Q96J65 1359 aa20.67■□□□□ 0.9
TMTC3-202ENST00000547034 NEUROD6Q96NK8 337 aa20.67■□□□□ 0.9
TMTC3-202ENST00000547034 RPAP1Q9BWH6 1393 aaPredicted RBP20.67■□□□□ 0.9
TMTC3-202ENST00000547034 RIPOR2Q9Y4F9 1068 aa20.67■□□□□ 0.9
TMTC3-202ENST00000547034 SH3TC1Q8TE82 1336 aa20.66■□□□□ 0.9
TMTC3-202ENST00000547034 KCNQ2O43526 872 aa20.66■□□□□ 0.9
TMTC3-202ENST00000547034 USPL1Q5W0Q7 1092 aa20.66■□□□□ 0.9
TMTC3-202ENST00000547034 PRPF40BQ6NWY9 871 aaKnown RBP20.66■□□□□ 0.9
TMTC3-202ENST00000547034 DNAJC2Q99543 621 aaKnown RBP20.66■□□□□ 0.9
TMTC3-202ENST00000547034 GREM2Q9H772 168 aa20.66■□□□□ 0.9
TMTC3-202ENST00000547034 ZSWIM6Q9HCJ5 1215 aa20.66■□□□□ 0.9
TMTC3-202ENST00000547034 TAF5LO75529 589 aa20.65■□□□□ 0.9
TMTC3-202ENST00000547034 ITGA6P23229 1130 aa20.65■□□□□ 0.9
TMTC3-202ENST00000547034 CREB3L3Q68CJ9 461 aa20.65■□□□□ 0.9
TMTC3-202ENST00000547034 ZNF589Q86UQ0 364 aaPredicted RBP20.65■□□□□ 0.9
TMTC3-202ENST00000547034 PAG1Q9NWQ8 432 aa20.65■□□□□ 0.9
TMTC3-202ENST00000547034 ANKRD18BA2A2Z9 1011 aa20.64■□□□□ 0.9
TMTC3-202ENST00000547034 PTMSP20962 102 aa20.64■□□□□ 0.9
TMTC3-202ENST00000547034 TSGA10IPQ3SY00 556 aa20.64■□□□□ 0.9
TMTC3-202ENST00000547034 PARP10Q53GL7 1025 aa20.64■□□□□ 0.9
TMTC3-202ENST00000547034 SLC27A2O14975 620 aa20.64■□□□□ 0.89
TMTC3-202ENST00000547034 ZKSCAN1P17029 563 aaPredicted RBP20.64■□□□□ 0.89
TMTC3-202ENST00000547034 TAF7LQ5H9L4 462 aa20.64■□□□□ 0.89
TMTC3-202ENST00000547034 NDUFB9Q9Y6M9 179 aa20.64■□□□□ 0.89
TMTC3-202ENST00000547034 ARAP2Q8WZ64 1704 aa20.63■□□□□ 0.89
TMTC3-202ENST00000547034 BTAF1O14981 1849 aa20.63■□□□□ 0.89
TMTC3-202ENST00000547034 RGL2O15211 777 aa20.63■□□□□ 0.89
TMTC3-202ENST00000547034 VPS53Q5VIR6 699 aa20.63■□□□□ 0.89
TMTC3-202ENST00000547034 HMG20BQ9P0W2 317 aa20.63■□□□□ 0.89
TMTC3-202ENST00000547034 A0A0G2JS52 829 aa20.62■□□□□ 0.89
TMTC3-202ENST00000547034 ADCK5Q3MIX3 580 aa20.62■□□□□ 0.89
TMTC3-202ENST00000547034 DDX46Q7L014 1031 aaKnown RBP20.62■□□□□ 0.89
TMTC3-202ENST00000547034 VGLL2Q8N8G2 317 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms