RNA–Protein interactions for RNA: ENST00000546964.5

PFKM-206, Transcript of phosphofructokinase, muscle, humanhuman

TSL 1 (best)

Gene PFKM, Length 3,063 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-206ENST00000546964 LRRN4CLQ8ND94 238 aa12.66□□□□□ -0.38
PFKM-206ENST00000546964 SEZ6LQ9BYH1 1024 aa12.66□□□□□ -0.38
PFKM-206ENST00000546964 TRIM7Q9C029 511 aa12.66□□□□□ -0.38
PFKM-206ENST00000546964 DNAAF2Q9NVR5 837 aaKnown RBP12.66□□□□□ -0.38
PFKM-206ENST00000546964 TGFB3P10600 412 aa12.65□□□□□ -0.38
PFKM-206ENST00000546964 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.65□□□□□ -0.38
PFKM-206ENST00000546964 U3KPZ7 1027 aaPredicted RBP12.65□□□□□ -0.38
PFKM-206ENST00000546964 ZEB2O60315 1214 aa12.65□□□□□ -0.38
PFKM-206ENST00000546964 FGFR1OPO95684 399 aaKnown RBP12.65□□□□□ -0.38
PFKM-206ENST00000546964 CLEC4GQ6UXB4 293 aa12.65□□□□□ -0.38
PFKM-206ENST00000546964 CTNNBL1Q8WYA6 563 aaPredicted RBP12.65□□□□□ -0.38
PFKM-206ENST00000546964 ROCK2O75116 1388 aaKnown RBP12.65□□□□□ -0.38
PFKM-206ENST00000546964 IBTKQ9P2D0 1353 aaPredicted RBP12.65□□□□□ -0.38
PFKM-206ENST00000546964 KIF21AQ7Z4S6 1674 aa12.65□□□□□ -0.38
PFKM-206ENST00000546964 PPP1R12BO60237 982 aaPredicted RBP12.65□□□□□ -0.38
PFKM-206ENST00000546964 IVLP07476 585 aa12.65□□□□□ -0.38
PFKM-206ENST00000546964 KCNA2P16389 499 aa12.65□□□□□ -0.38
PFKM-206ENST00000546964 USP8P40818 1118 aa12.65□□□□□ -0.38
PFKM-206ENST00000546964 ICA1Q05084 483 aa12.65□□□□□ -0.38
PFKM-206ENST00000546964 WDR78Q5VTH9 848 aa12.65□□□□□ -0.38
PFKM-206ENST00000546964 NANOGNBQ7Z5D8 188 aa12.65□□□□□ -0.38
PFKM-206ENST00000546964 FAM114A1Q8IWE2 563 aa12.65□□□□□ -0.38
PFKM-206ENST00000546964 RPAP2Q8IXW5 612 aaPredicted RBP12.65□□□□□ -0.38
PFKM-206ENST00000546964 SPO11Q9Y5K1 396 aa12.65□□□□□ -0.38
PFKM-206ENST00000546964 DMRT2Q9Y5R5 561 aa12.65□□□□□ -0.38
PFKM-206ENST00000546964 A0A087WUV0 522 aaPredicted RBP12.64□□□□□ -0.39
PFKM-206ENST00000546964 UPP2O95045 317 aa12.64□□□□□ -0.39
PFKM-206ENST00000546964 SESN3P58005 492 aa12.64□□□□□ -0.39
PFKM-206ENST00000546964 MTUS2Q5JR59 1369 aa12.64□□□□□ -0.39
PFKM-206ENST00000546964 TUFMP49411 452 aaKnown RBP12.64□□□□□ -0.39
PFKM-206ENST00000546964 LRMPQ12912 555 aa12.64□□□□□ -0.39
PFKM-206ENST00000546964 PPP2R5BQ15173 497 aa12.64□□□□□ -0.39
PFKM-206ENST00000546964 CDC37Q16543 378 aaPredicted RBP12.64□□□□□ -0.39
PFKM-206ENST00000546964 KIF4BQ2VIQ3 1234 aa12.64□□□□□ -0.39
PFKM-206ENST00000546964 LLGL2Q6P1M3 1020 aa12.64□□□□□ -0.39
PFKM-206ENST00000546964 FAM81AQ8TBF8 368 aa12.64□□□□□ -0.39
PFKM-206ENST00000546964 CENPHQ9H3R5 247 aa12.64□□□□□ -0.39
PFKM-206ENST00000546964 ZMYM3Q14202 1370 aa12.64□□□□□ -0.39
PFKM-206ENST00000546964 SYNRGQ9UMZ2 1314 aa12.64□□□□□ -0.39
PFKM-206ENST00000546964 WDR62O43379 1518 aa12.64□□□□□ -0.39
PFKM-206ENST00000546964 MRC2Q9UBG0 1479 aa12.63□□□□□ -0.39
PFKM-206ENST00000546964 A0A1B0GUA9 196 aa12.63□□□□□ -0.39
PFKM-206ENST00000546964 ZCCHC8Q6NZY4 707 aaKnown RBP12.63□□□□□ -0.39
PFKM-206ENST00000546964 CCDC65Q8IXS2 484 aa12.63□□□□□ -0.39
PFKM-206ENST00000546964 SENP2Q9HC62 589 aa12.63□□□□□ -0.39
PFKM-206ENST00000546964 DNAI1Q9UI46 699 aa12.63□□□□□ -0.39
PFKM-206ENST00000546964 STAG1Q8WVM7 1258 aa12.63□□□□□ -0.39
PFKM-206ENST00000546964 PMM1Q92871 262 aa12.63□□□□□ -0.39
PFKM-206ENST00000546964 SYTL4Q96C24 671 aaPredicted RBP12.63□□□□□ -0.39
PFKM-206ENST00000546964 LMBRD1Q9NUN5 540 aa12.63□□□□□ -0.39
PFKM-206ENST00000546964 MKRN1Q9UHC7 482 aaKnown RBP12.63□□□□□ -0.39
PFKM-206ENST00000546964 AK9Q5TCS8 1911 aa12.63□□□□□ -0.39
PFKM-206ENST00000546964 CCDC88BA6NC98 1476 aa12.63□□□□□ -0.39
PFKM-206ENST00000546964 SMC1AQ14683 1233 aaKnown RBP12.63□□□□□ -0.39
PFKM-206ENST00000546964 PKN1Q16512 942 aa12.63□□□□□ -0.39
PFKM-206ENST00000546964 KANK3Q6NY19 840 aa12.63□□□□□ -0.39
PFKM-206ENST00000546964 CCDC82Q8N4S0 544 aa12.63□□□□□ -0.39
PFKM-206ENST00000546964 ABCF3Q9NUQ8 709 aa12.63□□□□□ -0.39
PFKM-206ENST00000546964 MYO1FO00160 1098 aa12.62□□□□□ -0.39
PFKM-206ENST00000546964 DDIT3P35638 169 aa12.62□□□□□ -0.39
PFKM-206ENST00000546964 TPD52L1Q16890 204 aaPredicted RBP12.62□□□□□ -0.39
PFKM-206ENST00000546964 VPS53Q5VIR6 699 aa12.62□□□□□ -0.39
PFKM-206ENST00000546964 RABEP2Q9H5N1 569 aa12.62□□□□□ -0.39
PFKM-206ENST00000546964 GPCPD1Q9NPB8 672 aa12.62□□□□□ -0.39
PFKM-206ENST00000546964 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
PFKM-206ENST00000546964 ZRANB2O95218 330 aaKnown RBP eCLIP12.62□□□□□ -0.39
PFKM-206ENST00000546964 MBD4O95243 580 aa12.62□□□□□ -0.39
PFKM-206ENST00000546964 CCDC30Q5VVM6 783 aa12.62□□□□□ -0.39
PFKM-206ENST00000546964 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.62□□□□□ -0.395e-7■■■■□ 24.9
PFKM-206ENST00000546964 ABCC8Q09428 1581 aa12.61□□□□□ -0.39
PFKM-206ENST00000546964 SASH3O75995 380 aa12.61□□□□□ -0.39
PFKM-206ENST00000546964 LDHAP00338 332 aaKnown RBP12.61□□□□□ -0.39
PFKM-206ENST00000546964 ANKRD24Q8TF21 1146 aa12.61□□□□□ -0.39
PFKM-206ENST00000546964 LMBR1Q8WVP7 490 aa12.61□□□□□ -0.39
PFKM-206ENST00000546964 EPC1Q9H2F5 836 aa12.61□□□□□ -0.39
PFKM-206ENST00000546964 GINM1Q9NU53 330 aa12.61□□□□□ -0.39
PFKM-206ENST00000546964 SLC26A4O43511 780 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 PTGS1P23219 599 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.6□□□□□ -0.39
PFKM-206ENST00000546964 PTF1AQ7RTS3 328 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 ARHGAP22Q7Z5H3 698 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 SPOCK3Q9BQ16 436 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 CAPS2Q9BXY5 557 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 TSPY26PQ9H489 355 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 VPS18Q9P253 973 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 EIF4E1BA6NMX2 242 aaKnown RBP12.6□□□□□ -0.39
PFKM-206ENST00000546964 HOXA10P31260 410 aaPredicted RBP12.6□□□□□ -0.39
PFKM-206ENST00000546964 EIF5P55010 431 aaKnown RBP12.6□□□□□ -0.39
PFKM-206ENST00000546964 PKP1Q13835 747 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 MYO1HQ8N1T3 1032 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 IQUBQ8NA54 791 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 RGL1Q9NZL6 768 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 ANKRD62A6NC57 917 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 Q4G0T1 1027 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 LMBRD2Q68DH5 695 aaPredicted RBP12.6□□□□□ -0.39
PFKM-206ENST00000546964 CLEC17AQ6ZS10 378 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 ATP11CQ8NB49 1132 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 SPIRE2Q8WWL2 714 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 LNPEPQ9UIQ6 1025 aa12.6□□□□□ -0.39
PFKM-206ENST00000546964 CYP27B1O15528 508 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms