RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 CNKSR1Q969H4 720 aa14□□□□□ -0.17
TROAP-204ENST00000546776 FAM89AQ96GI7 184 aa14□□□□□ -0.17
TROAP-204ENST00000546776 NTSR2O95665 410 aa13.99□□□□□ -0.17
TROAP-204ENST00000546776 CASP7P55210 303 aa13.99□□□□□ -0.17
TROAP-204ENST00000546776 RTL5Q5HYW3 569 aaPredicted RBP13.99□□□□□ -0.17
TROAP-204ENST00000546776 CCDC24Q8N4L8 307 aa13.99□□□□□ -0.17
TROAP-204ENST00000546776 SUCLG2Q96I99 432 aa13.99□□□□□ -0.17
TROAP-204ENST00000546776 PCDHB15Q9Y5E8 787 aa13.99□□□□□ -0.17
TROAP-204ENST00000546776 IRS4O14654 1257 aaPredicted RBP13.98□□□□□ -0.17
TROAP-204ENST00000546776 HDAC1Q13547 482 aaPredicted RBP13.98□□□□□ -0.17
TROAP-204ENST00000546776 STYK1Q6J9G0 422 aa13.98□□□□□ -0.17
TROAP-204ENST00000546776 CEP85Q6P2H3 762 aa13.98□□□□□ -0.17
TROAP-204ENST00000546776 ANKRD44Q8N8A2 993 aa13.98□□□□□ -0.17
TROAP-204ENST00000546776 MASTLQ96GX5 879 aa13.98□□□□□ -0.17
TROAP-204ENST00000546776 PLA2G12BQ9BX93 195 aa13.98□□□□□ -0.17
TROAP-204ENST00000546776 PDE8AO60658 829 aa13.97□□□□□ -0.17
TROAP-204ENST00000546776 NPR1P16066 1061 aa13.97□□□□□ -0.17
TROAP-204ENST00000546776 ATP8B2P98198 1209 aa13.97□□□□□ -0.17
TROAP-204ENST00000546776 MTX1Q13505 466 aa13.97□□□□□ -0.17
TROAP-204ENST00000546776 JARID2Q92833 1246 aaPredicted RBP13.97□□□□□ -0.17
TROAP-204ENST00000546776 BICC1Q9H694 974 aaKnown RBP13.97□□□□□ -0.17
TROAP-204ENST00000546776 DDX60Q8IY21 1712 aaKnown RBP13.97□□□□□ -0.17
TROAP-204ENST00000546776 KIAA1551Q9HCM1 1747 aa13.97□□□□□ -0.17
TROAP-204ENST00000546776 CHD4Q14839 1912 aa13.97□□□□□ -0.17
TROAP-204ENST00000546776 GOLGB1Q14789 3259 aaKnown RBP13.96□□□□□ -0.17
TROAP-204ENST00000546776 SRGAP3O43295 1099 aa13.96□□□□□ -0.17
TROAP-204ENST00000546776 SRGNP10124 158 aa13.96□□□□□ -0.17
TROAP-204ENST00000546776 RABL6Q3YEC7 729 aaPredicted RBP13.96□□□□□ -0.17
TROAP-204ENST00000546776 SOGA3Q5TF21 947 aa13.96□□□□□ -0.17
TROAP-204ENST00000546776 B4GALNT3Q6L9W6 998 aa13.96□□□□□ -0.17
TROAP-204ENST00000546776 ALDH1B1P30837 517 aa13.95□□□□□ -0.18
TROAP-204ENST00000546776 ERFEQ4G0M1 354 aa13.95□□□□□ -0.18
TROAP-204ENST00000546776 SLC10A5Q5PT55 438 aa13.95□□□□□ -0.18
TROAP-204ENST00000546776 CENPQQ7L2Z9 268 aaPredicted RBP13.95□□□□□ -0.18
TROAP-204ENST00000546776 NUTM1Q86Y26 1132 aa13.95□□□□□ -0.18
TROAP-204ENST00000546776 RPGRQ92834 1020 aaKnown RBP13.95□□□□□ -0.18
TROAP-204ENST00000546776 KAZALD1Q96I82 304 aa13.95□□□□□ -0.18
TROAP-204ENST00000546776 NLRP3Q96P20 1036 aa13.95□□□□□ -0.18
TROAP-204ENST00000546776 CHMP3Q9Y3E7 222 aa13.95□□□□□ -0.18
TROAP-204ENST00000546776 RIC1Q4ADV7 1423 aa13.95□□□□□ -0.18
TROAP-204ENST00000546776 KLRG2A4D1S0 409 aaPredicted RBP13.94□□□□□ -0.18
TROAP-204ENST00000546776 CTSWP56202 376 aa13.94□□□□□ -0.18
TROAP-204ENST00000546776 FOXO4P98177 505 aa13.94□□□□□ -0.18
TROAP-204ENST00000546776 LMBR1LQ6UX01 489 aa13.94□□□□□ -0.18
TROAP-204ENST00000546776 GCC1Q96CN9 775 aa13.94□□□□□ -0.18
TROAP-204ENST00000546776 BRCA1P38398 1863 aaKnown RBP13.93□□□□□ -0.18
TROAP-204ENST00000546776 UTRNP46939 3433 aa13.93□□□□□ -0.18
TROAP-204ENST00000546776 HCLS1P14317 486 aaPredicted RBP13.93□□□□□ -0.18
TROAP-204ENST00000546776 POLA2Q14181 598 aa13.93□□□□□ -0.18
TROAP-204ENST00000546776 CCDC57Q2TAC2 916 aa13.93□□□□□ -0.18
TROAP-204ENST00000546776 CCDC152Q4G0S7 254 aa13.93□□□□□ -0.18
TROAP-204ENST00000546776 HSP90AB4PQ58FF6 505 aa13.93□□□□□ -0.18
TROAP-204ENST00000546776 EPHA10Q5JZY3 1008 aa13.93□□□□□ -0.18
TROAP-204ENST00000546776 SSH3Q8TE77 659 aa13.93□□□□□ -0.18
TROAP-204ENST00000546776 TMX4Q9H1E5 349 aaPredicted RBP13.93□□□□□ -0.18
TROAP-204ENST00000546776 ZBTB47Q9UFB7 747 aaPredicted RBP13.93□□□□□ -0.18
TROAP-204ENST00000546776 DLEC1Q9Y238 1755 aa13.92□□□□□ -0.18
TROAP-204ENST00000546776 PNMA6EA0A0J9YXQ4 647 aa13.92□□□□□ -0.18
TROAP-204ENST00000546776 CSF1RP07333 972 aa13.92□□□□□ -0.18
TROAP-204ENST00000546776 IFIT5Q13325 482 aaKnown RBP13.92□□□□□ -0.18
TROAP-204ENST00000546776 TAF7LQ5H9L4 462 aa13.92□□□□□ -0.18
TROAP-204ENST00000546776 PRPF40BQ6NWY9 871 aaKnown RBP13.92□□□□□ -0.18
TROAP-204ENST00000546776 SIRT2Q8IXJ6 389 aa13.92□□□□□ -0.18
TROAP-204ENST00000546776 SYNE4Q8N205 404 aa13.92□□□□□ -0.18
TROAP-204ENST00000546776 ZNF784Q8NCA9 323 aaPredicted RBP13.92□□□□□ -0.18
TROAP-204ENST00000546776 TTLL11Q8NHH1 800 aa13.92□□□□□ -0.18
TROAP-204ENST00000546776 RBM17Q96I25 401 aaKnown RBP13.92□□□□□ -0.18
TROAP-204ENST00000546776 ABCC12Q96J65 1359 aa13.92□□□□□ -0.18
TROAP-204ENST00000546776 ARFGEF1Q9Y6D6 1849 aa13.92□□□□□ -0.18
TROAP-204ENST00000546776 ANKRD31Q8N7Z5 1873 aa13.91□□□□□ -0.18
TROAP-204ENST00000546776 ANKRD18BA2A2Z9 1011 aa13.91□□□□□ -0.18
TROAP-204ENST00000546776 C21orf2O43822 256 aa13.91□□□□□ -0.18
TROAP-204ENST00000546776 IGHDP01880 384 aa13.91□□□□□ -0.18
TROAP-204ENST00000546776 SF3B3Q15393 1217 aaKnown RBP13.91□□□□□ -0.18
TROAP-204ENST00000546776 CRY2Q49AN0 593 aa13.91□□□□□ -0.18
TROAP-204ENST00000546776 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
TROAP-204ENST00000546776 RTL9Q8NET4 1388 aa13.91□□□□□ -0.18
TROAP-204ENST00000546776 SURF6O75683 361 aaKnown RBP13.9□□□□□ -0.18
TROAP-204ENST00000546776 C9orf131Q5VYM1 1079 aa13.9□□□□□ -0.18
TROAP-204ENST00000546776 ERC1Q8IUD2 1116 aa13.9□□□□□ -0.18
TROAP-204ENST00000546776 DCTPP1Q9H773 170 aa13.9□□□□□ -0.18
TROAP-204ENST00000546776 KDM2BQ8NHM5 1336 aa13.9□□□□□ -0.19
TROAP-204ENST00000546776 RAB11FIP3O75154 756 aa13.89□□□□□ -0.19
TROAP-204ENST00000546776 LMNB1P20700 586 aa13.89□□□□□ -0.19
TROAP-204ENST00000546776 ITGA6P23229 1130 aa13.89□□□□□ -0.19
TROAP-204ENST00000546776 HOXA10P31260 410 aaPredicted RBP13.89□□□□□ -0.19
TROAP-204ENST00000546776 G3BP1Q13283 466 aaKnown RBP eCLIP13.89□□□□□ -0.19
TROAP-204ENST00000546776 OS9Q13438 667 aaPredicted RBP13.89□□□□□ -0.19
TROAP-204ENST00000546776 FAM161AQ3B820 660 aa13.89□□□□□ -0.19
TROAP-204ENST00000546776 GRIPAP1Q4V328 841 aa13.89□□□□□ -0.19
TROAP-204ENST00000546776 CCDC93Q567U6 631 aa13.89□□□□□ -0.19
TROAP-204ENST00000546776 CC2D2BQ6DHV5 1058 aa13.89□□□□□ -0.19
TROAP-204ENST00000546776 SMC5Q8IY18 1101 aa13.89□□□□□ -0.19
TROAP-204ENST00000546776 RTKN2Q8IZC4 609 aa13.89□□□□□ -0.19
TROAP-204ENST00000546776 CRAMP1Q96RY5 1269 aa13.89□□□□□ -0.19
TROAP-204ENST00000546776 CDC5LQ99459 802 aaKnown RBP13.89□□□□□ -0.19
TROAP-204ENST00000546776 GREM2Q9H772 168 aa13.89□□□□□ -0.19
TROAP-204ENST00000546776 COPRSQ9NQ92 184 aa13.89□□□□□ -0.19
TROAP-204ENST00000546776 RNF181Q9P0P0 153 aa13.89□□□□□ -0.19
TROAP-204ENST00000546776 FBXO3Q9UK99 471 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms