RNA–Protein interactions for RNA: ENST00000546618.2

SVOP-201, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-201ENST00000546618 RWDD1Q9H446 243 aaPredicted RBP20.94■□□□□ 0.94
SVOP-201ENST00000546618 RIC1Q4ADV7 1423 aa20.94■□□□□ 0.94
SVOP-201ENST00000546618 HDAC1Q13547 482 aaPredicted RBP20.93■□□□□ 0.94
SVOP-201ENST00000546618 SF3B3Q15393 1217 aaKnown RBP20.93■□□□□ 0.94
SVOP-201ENST00000546618 CCDC136Q96JN2 1154 aa20.93■□□□□ 0.94
SVOP-201ENST00000546618 BRIP1Q9BX63 1249 aa20.93■□□□□ 0.94
SVOP-201ENST00000546618 SRGAP3O43295 1099 aa20.92■□□□□ 0.94
SVOP-201ENST00000546618 POLA2Q14181 598 aa20.92■□□□□ 0.94
SVOP-201ENST00000546618 CCDC152Q4G0S7 254 aa20.92■□□□□ 0.94
SVOP-201ENST00000546618 SSH3Q8TE77 659 aa20.92■□□□□ 0.94
SVOP-201ENST00000546618 ABCC12Q96J65 1359 aa20.92■□□□□ 0.94
SVOP-201ENST00000546618 CCDC24Q8N4L8 307 aa20.91■□□□□ 0.94
SVOP-201ENST00000546618 PNMA6EA0A0J9YXQ4 647 aa20.9■□□□□ 0.94
SVOP-201ENST00000546618 KLRG2A4D1S0 409 aaPredicted RBP20.9■□□□□ 0.94
SVOP-201ENST00000546618 CCDC57Q2TAC2 916 aa20.9■□□□□ 0.94
SVOP-201ENST00000546618 RTL9Q8NET4 1388 aa20.89■□□□□ 0.93
SVOP-201ENST00000546618 PDE6BP35913 854 aa20.89■□□□□ 0.93
SVOP-201ENST00000546618 IFIT5Q13325 482 aaKnown RBP20.89■□□□□ 0.93
SVOP-201ENST00000546618 CHMP3Q9Y3E7 222 aa20.89■□□□□ 0.93
SVOP-201ENST00000546618 ZNF784Q8NCA9 323 aaPredicted RBP20.88■□□□□ 0.93
SVOP-201ENST00000546618 GREM2Q9H772 168 aa20.88■□□□□ 0.93
SVOP-201ENST00000546618 PDZRN3Q9UPQ7 1066 aa20.88■□□□□ 0.93
SVOP-201ENST00000546618 NRXN2Q9P2S2 1712 aa20.87■□□□□ 0.93
SVOP-201ENST00000546618 GOLGB1Q14789 3259 aaKnown RBP20.87■□□□□ 0.93
SVOP-201ENST00000546618 ANKRD18BA2A2Z9 1011 aa20.87■□□□□ 0.93
SVOP-201ENST00000546618 IGHDP01880 384 aa20.87■□□□□ 0.93
SVOP-201ENST00000546618 CRY2Q49AN0 593 aa20.87■□□□□ 0.93
SVOP-201ENST00000546618 C3orf67Q6ZVT6 689 aa20.87■□□□□ 0.93
SVOP-201ENST00000546618 ITGA6P23229 1130 aa20.86■□□□□ 0.93
SVOP-201ENST00000546618 RFX5P48382 616 aaPredicted RBP20.86■□□□□ 0.93
SVOP-201ENST00000546618 FAM161AQ3B820 660 aa20.86■□□□□ 0.93
SVOP-201ENST00000546618 B4GALNT3Q6L9W6 998 aa20.86■□□□□ 0.93
SVOP-201ENST00000546618 CCDC85AQ96PX6 553 aaPredicted RBP20.86■□□□□ 0.93
SVOP-201ENST00000546618 DCTPP1Q9H773 170 aa20.86■□□□□ 0.93
SVOP-201ENST00000546618 COPRSQ9NQ92 184 aa20.86■□□□□ 0.93
SVOP-201ENST00000546618 GCC1Q96CN9 775 aa20.85■□□□□ 0.93
SVOP-201ENST00000546618 NOP58Q9Y2X3 529 aaKnown RBP20.85■□□□□ 0.93
SVOP-201ENST00000546618 PTPN12Q05209 780 aaKnown RBP20.84■□□□□ 0.93
SVOP-201ENST00000546618 HSP90AB4PQ58FF6 505 aa20.84■□□□□ 0.93
SVOP-201ENST00000546618 TAF7LQ5H9L4 462 aa20.84■□□□□ 0.93
SVOP-201ENST00000546618 DDX46Q7L014 1031 aaKnown RBP20.84■□□□□ 0.93
SVOP-201ENST00000546618 RPGRQ92834 1020 aaKnown RBP20.84■□□□□ 0.93
SVOP-201ENST00000546618 CDC5LQ99459 802 aaKnown RBP20.84■□□□□ 0.93
SVOP-201ENST00000546618 FBXO3Q9UK99 471 aa20.84■□□□□ 0.93
SVOP-201ENST00000546618 SURF6O75683 361 aaKnown RBP20.83■□□□□ 0.93
SVOP-201ENST00000546618 HOXA10P31260 410 aaPredicted RBP20.83■□□□□ 0.93
SVOP-201ENST00000546618 GPR162Q16538 588 aa20.83■□□□□ 0.93
SVOP-201ENST00000546618 CENPQQ7L2Z9 268 aaPredicted RBP20.83■□□□□ 0.93
SVOP-201ENST00000546618 RBM17Q96I25 401 aaKnown RBP20.83■□□□□ 0.93
SVOP-201ENST00000546618 DDX60Q8IY21 1712 aaKnown RBP20.83■□□□□ 0.92
SVOP-201ENST00000546618 LAMB2P55268 1798 aa20.82■□□□□ 0.92
SVOP-201ENST00000546618 H0YIN7 160 aa20.82■□□□□ 0.92
SVOP-201ENST00000546618 NPR1P16066 1061 aa20.82■□□□□ 0.92
SVOP-201ENST00000546618 SMC5Q8IY18 1101 aa20.82■□□□□ 0.92
SVOP-201ENST00000546618 SEC31BQ9NQW1 1179 aa20.82■□□□□ 0.92
SVOP-201ENST00000546618 KDM2BQ8NHM5 1336 aa20.81■□□□□ 0.92
SVOP-201ENST00000546618 C10orf71Q711Q0 1435 aa20.81■□□□□ 0.92
SVOP-201ENST00000546618 RAB11FIP3O75154 756 aa20.81■□□□□ 0.92
SVOP-201ENST00000546618 SRGNP10124 158 aa20.81■□□□□ 0.92
SVOP-201ENST00000546618 G3BP1Q13283 466 aaKnown RBP eCLIP20.81■□□□□ 0.92
SVOP-201ENST00000546618 KLHL34Q8N239 644 aa20.81■□□□□ 0.92
SVOP-201ENST00000546618 CRAMP1Q96RY5 1269 aa20.81■□□□□ 0.92
SVOP-201ENST00000546618 PA2G4Q9UQ80 394 aaKnown RBP20.81■□□□□ 0.92
SVOP-201ENST00000546618 CHD4Q14839 1912 aa20.8■□□□□ 0.92
SVOP-201ENST00000546618 CIAO1O76071 339 aa20.8■□□□□ 0.92
SVOP-201ENST00000546618 IGHMBP2P38935 993 aaKnown RBP20.8■□□□□ 0.92
SVOP-201ENST00000546618 RPS8P62241 208 aaKnown RBP20.8■□□□□ 0.92
SVOP-201ENST00000546618 LDHAL6AQ6ZMR3 332 aa20.8■□□□□ 0.92
SVOP-201ENST00000546618 C2CD5Q86YS7 1000 aa20.8■□□□□ 0.92
SVOP-201ENST00000546618 ANKRD18AQ8IVF6 992 aa20.8■□□□□ 0.92
SVOP-201ENST00000546618 KLHDC4Q8TBB5 520 aa20.8■□□□□ 0.92
SVOP-201ENST00000546618 MASTLQ96GX5 879 aa20.8■□□□□ 0.92
SVOP-201ENST00000546618 ZNF594Q96JF6 807 aaPredicted RBP20.8■□□□□ 0.92
SVOP-201ENST00000546618 CD2APQ9Y5K6 639 aa20.8■□□□□ 0.92
SVOP-201ENST00000546618 EYA2O00167 538 aa20.79■□□□□ 0.92
SVOP-201ENST00000546618 ALDH1B1P30837 517 aa20.79■□□□□ 0.92
SVOP-201ENST00000546618 TGFB2P61812 414 aa20.79■□□□□ 0.92
SVOP-201ENST00000546618 ERC1Q8IUD2 1116 aa20.79■□□□□ 0.92
SVOP-201ENST00000546618 MPHOSPH8Q99549 860 aa20.79■□□□□ 0.92
SVOP-201ENST00000546618 EXOC6BQ9Y2D4 811 aa20.79■□□□□ 0.92
SVOP-201ENST00000546618 BBOX1O75936 387 aa20.78■□□□□ 0.92
SVOP-201ENST00000546618 IL15P40933 162 aaPredicted RBP20.78■□□□□ 0.92
SVOP-201ENST00000546618 OS9Q13438 667 aaPredicted RBP20.78■□□□□ 0.92
SVOP-201ENST00000546618 GRAPQ13588 217 aa20.78■□□□□ 0.92
SVOP-201ENST00000546618 STYK1Q6J9G0 422 aa20.78■□□□□ 0.92
SVOP-201ENST00000546618 GRAPLQ8TC17 118 aaPredicted RBP20.78■□□□□ 0.92
SVOP-201ENST00000546618 SIL1Q9H173 461 aa20.78■□□□□ 0.92
SVOP-201ENST00000546618 BSDC1Q9NW68 430 aaPredicted RBP20.78■□□□□ 0.92
SVOP-201ENST00000546618 NLGN2Q8NFZ4 835 aa20.77■□□□□ 0.92
SVOP-201ENST00000546618 CELF1Q92879 486 aaKnown RBP20.77■□□□□ 0.92
SVOP-201ENST00000546618 CNNM1Q9NRU3 951 aa20.77■□□□□ 0.92
SVOP-201ENST00000546618 RIPOR2Q9Y4F9 1068 aa20.77■□□□□ 0.92
SVOP-201ENST00000546618 ATG9AQ7Z3C6 839 aa20.76■□□□□ 0.91
SVOP-201ENST00000546618 TMC4Q7Z404 712 aa20.76■□□□□ 0.91
SVOP-201ENST00000546618 KIF1BPQ96EK5 621 aa20.76■□□□□ 0.91
SVOP-201ENST00000546618 TNRC6CQ9HCJ0 1690 aaKnown RBP20.76■□□□□ 0.91
SVOP-201ENST00000546618 MYH3P11055 1940 aa20.76■□□□□ 0.91
SVOP-201ENST00000546618 LRRC24Q50LG9 513 aa20.75■□□□□ 0.91
SVOP-201ENST00000546618 CNKSR1Q969H4 720 aa20.75■□□□□ 0.91
SVOP-201ENST00000546618 PUS3Q9BZE2 481 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms