RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 MAP10Q9P2G4 905 aa9.67□□□□□ -0.86
CCDC60-205ENST00000546345 CCDC88AQ3V6T2 1871 aa9.67□□□□□ -0.86
CCDC60-205ENST00000546345 TIAM2Q8IVF5 1701 aa9.67□□□□□ -0.86
CCDC60-205ENST00000546345 IGSF1Q8N6C5 1336 aa9.66□□□□□ -0.86
CCDC60-205ENST00000546345 C4AP0C0L4 1744 aa9.66□□□□□ -0.86
CCDC60-205ENST00000546345 TOMM70O94826 608 aa9.66□□□□□ -0.86
CCDC60-205ENST00000546345 TFCP2L1Q9NZI6 479 aa9.66□□□□□ -0.86
CCDC60-205ENST00000546345 WWC3Q9ULE0 1092 aa9.66□□□□□ -0.86
CCDC60-205ENST00000546345 CD2APQ9Y5K6 639 aa9.66□□□□□ -0.86
CCDC60-205ENST00000546345 V9GY48 417 aaPredicted RBP9.66□□□□□ -0.86
CCDC60-205ENST00000546345 PXDNLA1KZ92 1463 aa9.66□□□□□ -0.86
CCDC60-205ENST00000546345 NR6A1Q15406 480 aa9.65□□□□□ -0.86
CCDC60-205ENST00000546345 EMID1Q96A84 441 aaPredicted RBP9.65□□□□□ -0.86
CCDC60-205ENST00000546345 UNC93B1Q9H1C4 597 aa9.65□□□□□ -0.86
CCDC60-205ENST00000546345 HMX1Q9NP08 348 aaPredicted RBP9.65□□□□□ -0.86
CCDC60-205ENST00000546345 NMRK2Q9NPI5 230 aa9.65□□□□□ -0.86
CCDC60-205ENST00000546345 ANKRD36BQ8N2N9 1353 aa9.64□□□□□ -0.87
CCDC60-205ENST00000546345 CSB-PGBD3P0DP91 1061 aa9.64□□□□□ -0.87
CCDC60-205ENST00000546345 ARMC2Q8NEN0 867 aa9.64□□□□□ -0.87
CCDC60-205ENST00000546345 C10orf71Q711Q0 1435 aa9.64□□□□□ -0.87
CCDC60-205ENST00000546345 MEGF6O75095 1541 aa9.63□□□□□ -0.87
CCDC60-205ENST00000546345 KCPQ6ZWJ8 1503 aa9.63□□□□□ -0.87
CCDC60-205ENST00000546345 APBB1O00213 710 aa9.63□□□□□ -0.87
CCDC60-205ENST00000546345 FLIIQ13045 1269 aa9.63□□□□□ -0.87
CCDC60-205ENST00000546345 TRIM32Q13049 653 aa9.63□□□□□ -0.87
CCDC60-205ENST00000546345 SPRYD7Q5W111 196 aa9.63□□□□□ -0.87
CCDC60-205ENST00000546345 AMIGO3Q86WK7 504 aa9.63□□□□□ -0.87
CCDC60-205ENST00000546345 VIRMAQ69YN4 1812 aaKnown RBP9.63□□□□□ -0.87
CCDC60-205ENST00000546345 COL5A3P25940 1745 aaPredicted RBP9.62□□□□□ -0.87
CCDC60-205ENST00000546345 IL2RBP14784 551 aa9.62□□□□□ -0.87
CCDC60-205ENST00000546345 MTMR14Q8NCE2 650 aa9.62□□□□□ -0.87
CCDC60-205ENST00000546345 PNMA1Q8ND90 353 aa9.62□□□□□ -0.87
CCDC60-205ENST00000546345 EPS8L1Q8TE68 723 aa9.62□□□□□ -0.87
CCDC60-205ENST00000546345 GTF3C3Q9Y5Q9 886 aa9.62□□□□□ -0.87
CCDC60-205ENST00000546345 DLEC1Q9Y238 1755 aa9.61□□□□□ -0.87
CCDC60-205ENST00000546345 BAP1Q92560 729 aa9.61□□□□□ -0.87
CCDC60-205ENST00000546345 TRIM34Q9BYJ4 488 aa9.61□□□□□ -0.87
CCDC60-205ENST00000546345 CD163L1Q9NR16 1453 aa9.6□□□□□ -0.87
CCDC60-205ENST00000546345 TTC21BQ7Z4L5 1316 aa9.6□□□□□ -0.87
CCDC60-205ENST00000546345 HSPA1AP0DMV8 641 aaKnown RBP9.6□□□□□ -0.87
CCDC60-205ENST00000546345 HSPA1BP0DMV9 641 aaKnown RBP9.6□□□□□ -0.87
CCDC60-205ENST00000546345 ZNF598Q86UK7 904 aaKnown RBP9.6□□□□□ -0.87
CCDC60-205ENST00000546345 DCAF11Q8TEB1 546 aa9.6□□□□□ -0.87
CCDC60-205ENST00000546345 PRM3Q9NNZ6 103 aa9.6□□□□□ -0.87
CCDC60-205ENST00000546345 CABP1Q9NZU7 370 aa9.6□□□□□ -0.87
CCDC60-205ENST00000546345 FKBPLQ9UIM3 349 aa9.6□□□□□ -0.87
CCDC60-205ENST00000546345 SRPK2P78362 688 aaKnown RBP9.59□□□□□ -0.87
CCDC60-205ENST00000546345 MCM6Q14566 821 aa9.59□□□□□ -0.87
CCDC60-205ENST00000546345 KCNH5Q8NCM2 988 aa9.59□□□□□ -0.87
CCDC60-205ENST00000546345 CCNL1Q9UK58 526 aaPredicted RBP9.59□□□□□ -0.87
CCDC60-205ENST00000546345 WNT7BP56706 349 aa9.58□□□□□ -0.88
CCDC60-205ENST00000546345 LINC01559Q495D7 138 aa9.58□□□□□ -0.88
CCDC60-205ENST00000546345 ZNF697Q5TEC3 545 aa9.58□□□□□ -0.88
CCDC60-205ENST00000546345 NLRP2Q9NX02 1062 aa9.58□□□□□ -0.88
CCDC60-205ENST00000546345 USP31Q70CQ4 1352 aa9.58□□□□□ -0.88
CCDC60-205ENST00000546345 DICER1Q9UPY3 1922 aaKnown RBP9.58□□□□□ -0.88
CCDC60-205ENST00000546345 TTC21AQ8NDW8 1320 aa9.57□□□□□ -0.88
CCDC60-205ENST00000546345 CENPJQ9HC77 1338 aaPredicted RBP9.57□□□□□ -0.88
CCDC60-205ENST00000546345 ZNF511Q8NB15 262 aa9.57□□□□□ -0.88
CCDC60-205ENST00000546345 GPKOWQ92917 476 aaPredicted RBP eCLIP9.57□□□□□ -0.88
CCDC60-205ENST00000546345 ZNF831Q5JPB2 1677 aa9.57□□□□□ -0.88
CCDC60-205ENST00000546345 MYH14Q7Z406 1995 aaKnown RBP9.57□□□□□ -0.88
CCDC60-205ENST00000546345 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
CCDC60-205ENST00000546345 PLEKHG2Q9H7P9 1386 aa9.56□□□□□ -0.88
CCDC60-205ENST00000546345 SH3BP2P78314 561 aa9.56□□□□□ -0.88
CCDC60-205ENST00000546345 SKOR1P84550 965 aa9.56□□□□□ -0.88
CCDC60-205ENST00000546345 SMIM5Q71RC9 77 aa9.56□□□□□ -0.88
CCDC60-205ENST00000546345 NDUFB9Q9Y6M9 179 aa9.56□□□□□ -0.88
CCDC60-205ENST00000546345 USP47Q96K76 1375 aa9.55□□□□□ -0.88
CCDC60-205ENST00000546345 AFDNP55196 1824 aaKnown RBP9.55□□□□□ -0.88
CCDC60-205ENST00000546345 FSTL1Q12841 308 aa9.55□□□□□ -0.88
CCDC60-205ENST00000546345 TRIM26Q12899 539 aaPredicted RBP9.55□□□□□ -0.88
CCDC60-205ENST00000546345 AGERQ15109 404 aa9.55□□□□□ -0.88
CCDC60-205ENST00000546345 NBPF1Q3BBV0 1214 aa9.55□□□□□ -0.88
CCDC60-205ENST00000546345 DDX54Q8TDD1 881 aaKnown RBP9.55□□□□□ -0.88
CCDC60-205ENST00000546345 ANKRD24Q8TF21 1146 aa9.55□□□□□ -0.88
CCDC60-205ENST00000546345 SYTL4Q96C24 671 aaPredicted RBP9.55□□□□□ -0.88
CCDC60-205ENST00000546345 ADAMTS7Q9UKP4 1686 aa9.55□□□□□ -0.88
CCDC60-205ENST00000546345 PALLDQ8WX93 1383 aa9.54□□□□□ -0.88
CCDC60-205ENST00000546345 SBNO2Q9Y2G9 1366 aa9.54□□□□□ -0.88
CCDC60-205ENST00000546345 RC3H1Q5TC82 1133 aaKnown RBP9.54□□□□□ -0.88
CCDC60-205ENST00000546345 PDXDC2PQ6P474 469 aa9.54□□□□□ -0.88
CCDC60-205ENST00000546345 PDE4DIPQ5VU43 2346 aa9.53□□□□□ -0.88
CCDC60-205ENST00000546345 FOXC1Q12948 553 aa9.53□□□□□ -0.88
CCDC60-205ENST00000546345 BPHLQ86WA6 291 aaPredicted RBP9.53□□□□□ -0.88
CCDC60-205ENST00000546345 THSD7BQ9C0I4 1608 aa9.53□□□□□ -0.88
CCDC60-205ENST00000546345 KTN1Q86UP2 1357 aaKnown RBP9.52□□□□□ -0.88
CCDC60-205ENST00000546345 RAB3GAP2Q9H2M9 1393 aa9.52□□□□□ -0.88
CCDC60-205ENST00000546345 WNT7AO00755 349 aa9.52□□□□□ -0.89
CCDC60-205ENST00000546345 RAD21O60216 631 aa9.52□□□□□ -0.89
CCDC60-205ENST00000546345 PTK2Q05397 1052 aa9.52□□□□□ -0.89
CCDC60-205ENST00000546345 FOXJ1Q92949 421 aa9.52□□□□□ -0.89
CCDC60-205ENST00000546345 PCGF6Q9BYE7 350 aa9.52□□□□□ -0.89
CCDC60-205ENST00000546345 NSD3Q9BZ95 1437 aa9.52□□□□□ -0.89
CCDC60-205ENST00000546345 GDPD2Q9HCC8 539 aa9.52□□□□□ -0.89
CCDC60-205ENST00000546345 TBC1D2BQ9UPU7 963 aa9.52□□□□□ -0.89
CCDC60-205ENST00000546345 CACNA1SQ13698 1873 aa9.51□□□□□ -0.89
CCDC60-205ENST00000546345 ANKRD26Q9UPS8 1709 aa9.51□□□□□ -0.89
CCDC60-205ENST00000546345 KDM6AO15550 1401 aaPredicted RBP9.51□□□□□ -0.89
CCDC60-205ENST00000546345 TNRC18O15417 2968 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms