RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 GRAPLQ8TC17 118 aaPredicted RBP21.22■□□□□ 0.99
LTBR-215ENST00000546296 C7orf43Q8WVR3 580 aa21.22■□□□□ 0.99
LTBR-215ENST00000546296 TRIM27P14373 513 aa21.21■□□□□ 0.99
LTBR-215ENST00000546296 CCDC93Q567U6 631 aa21.21■□□□□ 0.99
LTBR-215ENST00000546296 TTLL11Q8NHH1 800 aa21.21■□□□□ 0.99
LTBR-215ENST00000546296 CLUAP1Q96AJ1 413 aa21.21■□□□□ 0.99
LTBR-215ENST00000546296 PLA2G12BQ9BX93 195 aa21.21■□□□□ 0.99
LTBR-215ENST00000546296 OLFM4Q6UX06 510 aa21.2■□□□□ 0.98
LTBR-215ENST00000546296 DDX60Q8IY21 1712 aaKnown RBP21.19■□□□□ 0.98
LTBR-215ENST00000546296 NBPF7P0C2Y1 421 aaPredicted RBP21.19■□□□□ 0.98
LTBR-215ENST00000546296 CC2D2BQ6DHV5 1058 aa21.19■□□□□ 0.98
LTBR-215ENST00000546296 RTKN2Q8IZC4 609 aa21.19■□□□□ 0.98
LTBR-215ENST00000546296 SEC31BQ9NQW1 1179 aa21.19■□□□□ 0.98
LTBR-215ENST00000546296 SLX4Q8IY92 1834 aa21.18■□□□□ 0.98
LTBR-215ENST00000546296 RPS8P62241 208 aaKnown RBP21.18■□□□□ 0.98
LTBR-215ENST00000546296 RASSF7Q02833 373 aa21.18■□□□□ 0.98
LTBR-215ENST00000546296 TMC4Q7Z404 712 aa21.18■□□□□ 0.98
LTBR-215ENST00000546296 FTSJ3Q8IY81 847 aaKnown RBP21.18■□□□□ 0.98
LTBR-215ENST00000546296 CELF1Q92879 486 aaKnown RBP21.18■□□□□ 0.98
LTBR-215ENST00000546296 USP44Q9H0E7 712 aa21.18■□□□□ 0.98
LTBR-215ENST00000546296 GREM2Q9H772 168 aa21.18■□□□□ 0.98
LTBR-215ENST00000546296 TNNQ9UQP3 1299 aa21.18■□□□□ 0.98
LTBR-215ENST00000546296 CHMP3Q9Y3E7 222 aa21.18■□□□□ 0.98
LTBR-215ENST00000546296 ATP6V0A2Q9Y487 856 aa21.18■□□□□ 0.98
LTBR-215ENST00000546296 FOXO4P98177 505 aa21.17■□□□□ 0.98
LTBR-215ENST00000546296 INTS3Q68E01 1043 aaKnown RBP21.17■□□□□ 0.98
LTBR-215ENST00000546296 SP8Q8IXZ3 490 aa21.17■□□□□ 0.98
LTBR-215ENST00000546296 SUCLG2Q96I99 432 aa21.17■□□□□ 0.98
LTBR-215ENST00000546296 CDC5LQ99459 802 aaKnown RBP21.17■□□□□ 0.98
LTBR-215ENST00000546296 TAOK3Q9H2K8 898 aa21.17■□□□□ 0.98
LTBR-215ENST00000546296 UTYO14607 1347 aa21.17■□□□□ 0.98
LTBR-215ENST00000546296 ARFGEF1Q9Y6D6 1849 aa21.17■□□□□ 0.98
LTBR-215ENST00000546296 NFKBIEO00221 500 aa21.16■□□□□ 0.98
LTBR-215ENST00000546296 CSF1RP07333 972 aa21.16■□□□□ 0.98
LTBR-215ENST00000546296 YY1P25490 414 aa21.16■□□□□ 0.98
LTBR-215ENST00000546296 GRIPAP1Q4V328 841 aa21.16■□□□□ 0.98
LTBR-215ENST00000546296 LMBR1LQ6UX01 489 aa21.16■□□□□ 0.98
LTBR-215ENST00000546296 ANKRD18AQ8IVF6 992 aa21.16■□□□□ 0.98
LTBR-215ENST00000546296 EPHA10Q5JZY3 1008 aa21.15■□□□□ 0.98
LTBR-215ENST00000546296 C9orf131Q5VYM1 1079 aa21.15■□□□□ 0.98
LTBR-215ENST00000546296 DZIP1LQ8IYY4 767 aaKnown RBP21.15■□□□□ 0.98
LTBR-215ENST00000546296 LAMB2P55268 1798 aa21.15■□□□□ 0.98
LTBR-215ENST00000546296 UBTFL1P0CB47 393 aaPredicted RBP21.14■□□□□ 0.97
LTBR-215ENST00000546296 LMNB1P20700 586 aa21.14■□□□□ 0.97
LTBR-215ENST00000546296 ITGA6P23229 1130 aa21.14■□□□□ 0.97
LTBR-215ENST00000546296 FKBP4Q02790 459 aaKnown RBP eCLIP21.14■□□□□ 0.97
LTBR-215ENST00000546296 FAM161AQ3B820 660 aa21.14■□□□□ 0.97
LTBR-215ENST00000546296 RNF181Q9P0P0 153 aa21.14■□□□□ 0.97
LTBR-215ENST00000546296 HDAC5Q9UQL6 1122 aa21.14■□□□□ 0.97
LTBR-215ENST00000546296 UTRNP46939 3433 aa21.14■□□□□ 0.97
LTBR-215ENST00000546296 RTL9Q8NET4 1388 aa21.13■□□□□ 0.97
LTBR-215ENST00000546296 ANKRD18BA2A2Z9 1011 aa21.13■□□□□ 0.97
LTBR-215ENST00000546296 MS4A1P11836 297 aa21.13■□□□□ 0.97
LTBR-215ENST00000546296 IGHMBP2P38935 993 aaKnown RBP21.13■□□□□ 0.97
LTBR-215ENST00000546296 IFIT5Q13325 482 aaKnown RBP21.13■□□□□ 0.97
LTBR-215ENST00000546296 SLC51AQ86UW1 340 aa21.13■□□□□ 0.97
LTBR-215ENST00000546296 TMEM57Q8N5G2 664 aa21.13■□□□□ 0.97
LTBR-215ENST00000546296 CACNA1SQ13698 1873 aa21.13■□□□□ 0.97
LTBR-215ENST00000546296 LTBP3Q9NS15 1303 aa21.12■□□□□ 0.97
LTBR-215ENST00000546296 CCDC57Q2TAC2 916 aa21.12■□□□□ 0.97
LTBR-215ENST00000546296 TAF7LQ5H9L4 462 aa21.12■□□□□ 0.97
LTBR-215ENST00000546296 DPP8Q6V1X1 898 aaPredicted RBP21.12■□□□□ 0.97
LTBR-215ENST00000546296 MPNDQ8N594 471 aa21.12■□□□□ 0.97
LTBR-215ENST00000546296 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.12■□□□□ 0.97
LTBR-215ENST00000546296 KAZALD1Q96I82 304 aa21.12■□□□□ 0.97
LTBR-215ENST00000546296 BICC1Q9H694 974 aaKnown RBP21.12■□□□□ 0.97
LTBR-215ENST00000546296 PLIN1O60240 522 aa21.11■□□□□ 0.97
LTBR-215ENST00000546296 GNAI3P08754 354 aa21.11■□□□□ 0.97
LTBR-215ENST00000546296 PSMD1Q99460 953 aa21.11■□□□□ 0.97
LTBR-215ENST00000546296 MPHOSPH8Q99549 860 aa21.11■□□□□ 0.97
LTBR-215ENST00000546296 MEIS3Q99687 375 aa21.11■□□□□ 0.97
LTBR-215ENST00000546296 ZNF277Q9NRM2 450 aaPredicted RBP21.11■□□□□ 0.97
LTBR-215ENST00000546296 ITPRIPQ8IWB1 547 aa21.1■□□□□ 0.97
LTBR-215ENST00000546296 NSFL1CQ9UNZ2 370 aaKnown RBP21.1■□□□□ 0.97
LTBR-215ENST00000546296 RLBP1P12271 317 aa21.09■□□□□ 0.97
LTBR-215ENST00000546296 SUPT20HQ8NEM7 779 aa21.09■□□□□ 0.97
LTBR-215ENST00000546296 PANK1Q8TE04 598 aa21.09■□□□□ 0.97
LTBR-215ENST00000546296 BSDC1Q9NW68 430 aaPredicted RBP21.09■□□□□ 0.97
LTBR-215ENST00000546296 ANKIB1Q9P2G1 1089 aa21.09■□□□□ 0.97
LTBR-215ENST00000546296 PRELPP51888 382 aa21.08■□□□□ 0.97
LTBR-215ENST00000546296 GPSM2P81274 684 aa21.08■□□□□ 0.97
LTBR-215ENST00000546296 ANKRD44Q8N8A2 993 aa21.08■□□□□ 0.97
LTBR-215ENST00000546296 LRRFIP2Q9Y608 721 aaKnown RBP21.08■□□□□ 0.97
LTBR-215ENST00000546296 IARSP41252 1262 aaKnown RBP21.07■□□□□ 0.96
LTBR-215ENST00000546296 RABL6Q3YEC7 729 aaPredicted RBP21.07■□□□□ 0.96
LTBR-215ENST00000546296 TAF1P21675 1872 aa21.07■□□□□ 0.96
LTBR-215ENST00000546296 C6orf229H3BNL8 230 aa21.06■□□□□ 0.96
LTBR-215ENST00000546296 ZNF594Q96JF6 807 aaPredicted RBP21.06■□□□□ 0.96
LTBR-215ENST00000546296 GNAI2P04899 355 aa21.05■□□□□ 0.96
LTBR-215ENST00000546296 LDHAL6AQ6ZMR3 332 aa21.05■□□□□ 0.96
LTBR-215ENST00000546296 LARGE2Q8N3Y3 721 aa21.05■□□□□ 0.96
LTBR-215ENST00000546296 RTFDC1Q9BY42 306 aaPredicted RBP21.05■□□□□ 0.96
LTBR-215ENST00000546296 MINPP1Q9UNW1 487 aa21.05■□□□□ 0.96
LTBR-215ENST00000546296 CHD4Q14839 1912 aa21.05■□□□□ 0.96
LTBR-215ENST00000546296 MYH3P11055 1940 aa21.04■□□□□ 0.96
LTBR-215ENST00000546296 PPIP5K2O43314 1243 aa21.04■□□□□ 0.96
LTBR-215ENST00000546296 JDP2Q8WYK2 163 aa21.04■□□□□ 0.96
LTBR-215ENST00000546296 CNNM1Q9NRU3 951 aa21.04■□□□□ 0.96
LTBR-215ENST00000546296 GGA1Q9UJY5 639 aa21.04■□□□□ 0.96
LTBR-215ENST00000546296 COL4A1P02462 1669 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms