RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 UBR3Q6ZT12 1888 aa23.86■■□□□ 1.41
SKP2-208ENST00000546211 EYA2O00167 538 aa23.86■■□□□ 1.41
SKP2-208ENST00000546211 CIAO1O76071 339 aa23.86■■□□□ 1.41
SKP2-208ENST00000546211 IL15P40933 162 aaPredicted RBP23.86■■□□□ 1.41
SKP2-208ENST00000546211 GPATCH3Q96I76 525 aa23.86■■□□□ 1.41
SKP2-208ENST00000546211 ZNF594Q96JF6 807 aaPredicted RBP23.86■■□□□ 1.41
SKP2-208ENST00000546211 NYXQ9GZU5 481 aa23.86■■□□□ 1.41
SKP2-208ENST00000546211 TNS1Q9HBL0 1735 aaKnown RBP23.86■■□□□ 1.41
SKP2-208ENST00000546211 MYH3P11055 1940 aa23.85■■□□□ 1.41
SKP2-208ENST00000546211 ANKRD18BA2A2Z9 1011 aa23.85■■□□□ 1.41
SKP2-208ENST00000546211 HCLS1P14317 486 aaPredicted RBP23.85■■□□□ 1.41
SKP2-208ENST00000546211 TSHZ3Q63HK5 1081 aa23.85■■□□□ 1.41
SKP2-208ENST00000546211 GREM2Q9H772 168 aa23.85■■□□□ 1.41
SKP2-208ENST00000546211 TTC41PQ6P2S7 1318 aa23.84■■□□□ 1.41
SKP2-208ENST00000546211 ITGA6P23229 1130 aa23.84■■□□□ 1.41
SKP2-208ENST00000546211 TFCP2Q12800 502 aa23.84■■□□□ 1.41
SKP2-208ENST00000546211 CDC45O75419 566 aa23.83■■□□□ 1.41
SKP2-208ENST00000546211 GTF2E1P29083 439 aaPredicted RBP23.83■■□□□ 1.41
SKP2-208ENST00000546211 ATG9AQ7Z3C6 839 aa23.83■■□□□ 1.41
SKP2-208ENST00000546211 EAF2Q96CJ1 260 aaPredicted RBP23.83■■□□□ 1.41
SKP2-208ENST00000546211 LAMB2P55268 1798 aa23.83■■□□□ 1.41
SKP2-208ENST00000546211 EP400Q96L91 3159 aa23.83■■□□□ 1.41
SKP2-208ENST00000546211 SDSP20132 328 aa23.82■■□□□ 1.4
SKP2-208ENST00000546211 RGPD3A6NKT7 1758 aaPredicted RBP23.82■■□□□ 1.4
SKP2-208ENST00000546211 RGPD4Q7Z3J3 1758 aa23.82■■□□□ 1.4
SKP2-208ENST00000546211 ERC2O15083 957 aa23.82■■□□□ 1.4
SKP2-208ENST00000546211 ERFEQ4G0M1 354 aa23.82■■□□□ 1.4
SKP2-208ENST00000546211 CCDC152Q4G0S7 254 aa23.82■■□□□ 1.4
SKP2-208ENST00000546211 LRRC24Q50LG9 513 aa23.82■■□□□ 1.4
SKP2-208ENST00000546211 TNNI3KQ59H18 835 aa23.82■■□□□ 1.4
SKP2-208ENST00000546211 NBPF5PQ86XG9 351 aaPredicted RBP23.82■■□□□ 1.4
SKP2-208ENST00000546211 UPF2Q9HAU5 1272 aaKnown RBP23.82■■□□□ 1.4
SKP2-208ENST00000546211 ECHDC1Q9NTX5 307 aa23.82■■□□□ 1.4
SKP2-208ENST00000546211 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.82■■□□□ 1.4
SKP2-208ENST00000546211 FPGT-TNNI3KV9GXZ4 949 aa23.82■■□□□ 1.4
SKP2-208ENST00000546211 DDX60Q8IY21 1712 aaKnown RBP23.81■■□□□ 1.4
SKP2-208ENST00000546211 COL24A1Q17RW2 1714 aa23.81■■□□□ 1.4
SKP2-208ENST00000546211 GLRX3O76003 335 aaKnown RBP23.8■■□□□ 1.4
SKP2-208ENST00000546211 TPTE2Q6XPS3 522 aa23.8■■□□□ 1.4
SKP2-208ENST00000546211 PI4K2BQ8TCG2 481 aa23.8■■□□□ 1.4
SKP2-208ENST00000546211 PUS3Q9BZE2 481 aaKnown RBP23.8■■□□□ 1.4
SKP2-208ENST00000546211 CCDC8Q9H0W5 538 aaPredicted RBP23.8■■□□□ 1.4
SKP2-208ENST00000546211 GPR108Q9NPR9 543 aa23.8■■□□□ 1.4
SKP2-208ENST00000546211 TFCP2L1Q9NZI6 479 aa23.8■■□□□ 1.4
SKP2-208ENST00000546211 SEC24BO95487 1268 aa23.79■■□□□ 1.4
SKP2-208ENST00000546211 CARMIL3Q8ND23 1372 aa23.79■■□□□ 1.4
SKP2-208ENST00000546211 TRIM6-TRIM34B2RNG4 842 aa23.78■■□□□ 1.4
SKP2-208ENST00000546211 CASC1Q6TDU7 716 aa23.78■■□□□ 1.4
SKP2-208ENST00000546211 LDHAL6AQ6ZMR3 332 aa23.78■■□□□ 1.4
SKP2-208ENST00000546211 TBC1D9Q6ZT07 1266 aa23.78■■□□□ 1.4
SKP2-208ENST00000546211 AKT1S1Q96B36 256 aa23.78■■□□□ 1.4
SKP2-208ENST00000546211 CEP126Q9P2H0 1117 aa23.78■■□□□ 1.4
SKP2-208ENST00000546211 RTL9Q8NET4 1388 aa23.78■■□□□ 1.4
SKP2-208ENST00000546211 EIF5BO60841 1220 aaKnown RBP23.78■■□□□ 1.4
SKP2-208ENST00000546211 SLC10A5Q5PT55 438 aa23.78■■□□□ 1.4
SKP2-208ENST00000546211 GYS1P13807 737 aa23.77■■□□□ 1.4
SKP2-208ENST00000546211 ZNF827Q17R98 1081 aa23.77■■□□□ 1.4
SKP2-208ENST00000546211 RILPL2Q969X0 211 aa23.77■■□□□ 1.4
SKP2-208ENST00000546211 CNNM1Q9NRU3 951 aa23.77■■□□□ 1.4
SKP2-208ENST00000546211 NPHP1O15259 732 aa23.76■■□□□ 1.39
SKP2-208ENST00000546211 ANP32AP39687 249 aaKnown RBP23.76■■□□□ 1.39
SKP2-208ENST00000546211 NFIXQ14938 502 aa23.76■■□□□ 1.39
SKP2-208ENST00000546211 FLAD1Q8NFF5 587 aa23.76■■□□□ 1.39
SKP2-208ENST00000546211 TLR7Q9NYK1 1049 aaKnown RBP23.76■■□□□ 1.39
SKP2-208ENST00000546211 AKAP2Q9Y2D5 859 aa23.75■■□□□ 1.39
SKP2-208ENST00000546211 MFAP1P55081 439 aaKnown RBP23.74■■□□□ 1.39
SKP2-208ENST00000546211 SF3B2Q13435 895 aaKnown RBP23.74■■□□□ 1.39
SKP2-208ENST00000546211 SF3B3Q15393 1217 aaKnown RBP23.74■■□□□ 1.39
SKP2-208ENST00000546211 DBNLQ9UJU6 430 aaKnown RBP23.74■■□□□ 1.39
SKP2-208ENST00000546211 RIPOR2Q9Y4F9 1068 aa23.74■■□□□ 1.39
SKP2-208ENST00000546211 ABCC12Q96J65 1359 aa23.74■■□□□ 1.39
SKP2-208ENST00000546211 TUBGCP6Q96RT7 1819 aa23.74■■□□□ 1.39
SKP2-208ENST00000546211 ZNF609O15014 1411 aa23.74■■□□□ 1.39
SKP2-208ENST00000546211 METTL24Q5JXM2 366 aa23.74■■□□□ 1.39
SKP2-208ENST00000546211 CNTROBQ8N137 903 aa23.74■■□□□ 1.39
SKP2-208ENST00000546211 NEUROD6Q96NK8 337 aa23.74■■□□□ 1.39
SKP2-208ENST00000546211 NLRP3Q96P20 1036 aa23.74■■□□□ 1.39
SKP2-208ENST00000546211 LRP5O75197 1615 aa23.73■■□□□ 1.39
SKP2-208ENST00000546211 IGHMBP2P38935 993 aaKnown RBP23.73■■□□□ 1.39
SKP2-208ENST00000546211 MPHOSPH8Q99549 860 aa23.73■■□□□ 1.39
SKP2-208ENST00000546211 SEC31BQ9NQW1 1179 aa23.73■■□□□ 1.39
SKP2-208ENST00000546211 CAMKK2Q96RR4 588 aa23.72■■□□□ 1.39
SKP2-208ENST00000546211 CDC5LQ99459 802 aaKnown RBP23.72■■□□□ 1.39
SKP2-208ENST00000546211 DBNDD2Q9BQY9 259 aa23.72■■□□□ 1.39
SKP2-208ENST00000546211 MSH5O43196 834 aa23.71■■□□□ 1.39
SKP2-208ENST00000546211 EN1Q05925 392 aaPredicted RBP23.71■■□□□ 1.39
SKP2-208ENST00000546211 CNBD1Q8NA66 436 aa23.71■■□□□ 1.39
SKP2-208ENST00000546211 RIC1Q4ADV7 1423 aa23.71■■□□□ 1.39
SKP2-208ENST00000546211 MROH5Q6ZUA9 1318 aa23.7■■□□□ 1.39
SKP2-208ENST00000546211 A0A1B0GUL7 405 aa23.7■■□□□ 1.38
SKP2-208ENST00000546211 MAP4K4O95819 1239 aaPredicted RBP23.7■■□□□ 1.38
SKP2-208ENST00000546211 TIMM10P62072 90 aa23.7■■□□□ 1.38
SKP2-208ENST00000546211 EZH2Q15910 746 aaKnown RBP23.7■■□□□ 1.38
SKP2-208ENST00000546211 ATP5JP18859 108 aa23.69■■□□□ 1.38
SKP2-208ENST00000546211 TM4SF1P30408 202 aa23.69■■□□□ 1.38
SKP2-208ENST00000546211 BAG6P46379 1132 aa23.69■■□□□ 1.38
SKP2-208ENST00000546211 C3orf67Q6ZVT6 689 aa23.69■■□□□ 1.38
SKP2-208ENST00000546211 COL23A1Q86Y22 540 aaPredicted RBP23.69■■□□□ 1.38
SKP2-208ENST00000546211 ANKRD18AQ8IVF6 992 aa23.68■■□□□ 1.38
SKP2-208ENST00000546211 BOLA2Q9H3K6 86 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms