RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 ZBTB7BO15156 539 aaPredicted RBP12.93□□□□□ -0.34
LINC00939-203ENST00000545784 FOXO4P98177 505 aa12.93□□□□□ -0.34
LINC00939-203ENST00000545784 EPHA10Q5JZY3 1008 aa12.93□□□□□ -0.34
LINC00939-203ENST00000545784 NLGN2Q8NFZ4 835 aa12.93□□□□□ -0.34
LINC00939-203ENST00000545784 MEIS3Q99687 375 aa12.93□□□□□ -0.34
LINC00939-203ENST00000545784 PDE8AO60658 829 aa12.92□□□□□ -0.34
LINC00939-203ENST00000545784 SRGNP10124 158 aa12.92□□□□□ -0.34
LINC00939-203ENST00000545784 DPEP1P16444 411 aa12.92□□□□□ -0.34
LINC00939-203ENST00000545784 CHRNA5P30532 468 aa12.92□□□□□ -0.34
LINC00939-203ENST00000545784 SF3B3Q15393 1217 aaKnown RBP12.92□□□□□ -0.34
LINC00939-203ENST00000545784 SUCLG2Q96I99 432 aa12.92□□□□□ -0.34
LINC00939-203ENST00000545784 NLRP3Q96P20 1036 aa12.92□□□□□ -0.34
LINC00939-203ENST00000545784 CSF1RP07333 972 aa12.92□□□□□ -0.34
LINC00939-203ENST00000545784 MVPQ14764 893 aaKnown RBP12.92□□□□□ -0.34
LINC00939-203ENST00000545784 NFKBIBQ15653 356 aa12.92□□□□□ -0.34
LINC00939-203ENST00000545784 C2CD5Q86YS7 1000 aa12.92□□□□□ -0.34
LINC00939-203ENST00000545784 COG6Q9Y2V7 657 aa12.92□□□□□ -0.34
LINC00939-203ENST00000545784 HOXA10P31260 410 aaPredicted RBP12.91□□□□□ -0.34
LINC00939-203ENST00000545784 ITPRIPQ8IWB1 547 aa12.91□□□□□ -0.34
LINC00939-203ENST00000545784 TTLL11Q8NHH1 800 aa12.91□□□□□ -0.34
LINC00939-203ENST00000545784 PDZRN3Q9UPQ7 1066 aa12.91□□□□□ -0.34
LINC00939-203ENST00000545784 KIF13BQ9NQT8 1826 aa12.91□□□□□ -0.34
LINC00939-203ENST00000545784 HSP90B1P14625 803 aaKnown RBP12.9□□□□□ -0.34
LINC00939-203ENST00000545784 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
LINC00939-203ENST00000545784 ANKRD44Q8N8A2 993 aa12.9□□□□□ -0.34
LINC00939-203ENST00000545784 ANKRD31Q8N7Z5 1873 aa12.9□□□□□ -0.34
LINC00939-203ENST00000545784 H0YIN7 160 aa12.9□□□□□ -0.34
LINC00939-203ENST00000545784 CTSWP56202 376 aa12.9□□□□□ -0.34
LINC00939-203ENST00000545784 GNAI3P08754 354 aa12.89□□□□□ -0.35
LINC00939-203ENST00000545784 NPR1P16066 1061 aa12.89□□□□□ -0.35
LINC00939-203ENST00000545784 RABL6Q3YEC7 729 aaPredicted RBP12.89□□□□□ -0.35
LINC00939-203ENST00000545784 STYK1Q6J9G0 422 aa12.89□□□□□ -0.35
LINC00939-203ENST00000545784 MASTLQ96GX5 879 aa12.89□□□□□ -0.35
LINC00939-203ENST00000545784 TNRC6CQ9HCJ0 1690 aaKnown RBP12.89□□□□□ -0.35
LINC00939-203ENST00000545784 N4BP2Q86UW6 1770 aaPredicted RBP12.89□□□□□ -0.35
LINC00939-203ENST00000545784 UBTFL1P0CB47 393 aaPredicted RBP12.89□□□□□ -0.35
LINC00939-203ENST00000545784 BICC1Q9H694 974 aaKnown RBP12.89□□□□□ -0.35
LINC00939-203ENST00000545784 ZBTB40Q9NUA8 1239 aa12.89□□□□□ -0.35
LINC00939-203ENST00000545784 KIAA1551Q9HCM1 1747 aa12.88□□□□□ -0.35
LINC00939-203ENST00000545784 LMBR1LQ6UX01 489 aa12.88□□□□□ -0.35
LINC00939-203ENST00000545784 CRAMP1Q96RY5 1269 aa12.88□□□□□ -0.35
LINC00939-203ENST00000545784 DDX19BQ9UMR2 479 aa12.88□□□□□ -0.35
LINC00939-203ENST00000545784 LRRFIP2Q9Y608 721 aaKnown RBP12.88□□□□□ -0.35
LINC00939-203ENST00000545784 DDX60Q8IY21 1712 aaKnown RBP12.88□□□□□ -0.35
LINC00939-203ENST00000545784 GREM2Q9H772 168 aa12.87□□□□□ -0.35
LINC00939-203ENST00000545784 SEC31BQ9NQW1 1179 aa12.87□□□□□ -0.35
LINC00939-203ENST00000545784 CCDC152Q4G0S7 254 aa12.87□□□□□ -0.35
LINC00939-203ENST00000545784 ZNF622Q969S3 477 aaKnown RBP eCLIP12.87□□□□□ -0.35
LINC00939-203ENST00000545784 RBM17Q96I25 401 aaKnown RBP12.87□□□□□ -0.35
LINC00939-203ENST00000545784 CCDC85AQ96PX6 553 aaPredicted RBP12.87□□□□□ -0.35
LINC00939-203ENST00000545784 PIM2Q9P1W9 311 aa12.87□□□□□ -0.35
LINC00939-203ENST00000545784 RTL9Q8NET4 1388 aa12.87□□□□□ -0.35
LINC00939-203ENST00000545784 GNAI2P04899 355 aa12.86□□□□□ -0.35
LINC00939-203ENST00000545784 C7orf43Q8WVR3 580 aa12.86□□□□□ -0.35
LINC00939-203ENST00000545784 RPGRQ92834 1020 aaKnown RBP12.86□□□□□ -0.35
LINC00939-203ENST00000545784 HDAC5Q9UQL6 1122 aa12.86□□□□□ -0.35
LINC00939-203ENST00000545784 GOLGB1Q14789 3259 aaKnown RBP12.86□□□□□ -0.35
LINC00939-203ENST00000545784 DDX46Q7L014 1031 aaKnown RBP12.85□□□□□ -0.35
LINC00939-203ENST00000545784 TTLL6Q8N841 843 aa12.85□□□□□ -0.35
LINC00939-203ENST00000545784 CNKSR1Q969H4 720 aa12.85□□□□□ -0.35
LINC00939-203ENST00000545784 ALDH1B1P30837 517 aa12.85□□□□□ -0.35
LINC00939-203ENST00000545784 MTX1Q13505 466 aa12.85□□□□□ -0.35
LINC00939-203ENST00000545784 GRAPQ13588 217 aa12.85□□□□□ -0.35
LINC00939-203ENST00000545784 BECN1Q14457 450 aa12.85□□□□□ -0.35
LINC00939-203ENST00000545784 GRAPLQ8TC17 118 aaPredicted RBP12.85□□□□□ -0.35
LINC00939-203ENST00000545784 CELF1Q92879 486 aaKnown RBP12.85□□□□□ -0.35
LINC00939-203ENST00000545784 C1orf115Q9H7X2 142 aa12.85□□□□□ -0.35
LINC00939-203ENST00000545784 COL11A2P13942 1736 aaPredicted RBP12.84□□□□□ -0.35
LINC00939-203ENST00000545784 BBOX1O75936 387 aa12.84□□□□□ -0.35
LINC00939-203ENST00000545784 ITGA6P23229 1130 aa12.84□□□□□ -0.35
LINC00939-203ENST00000545784 RFX5P48382 616 aaPredicted RBP12.84□□□□□ -0.35
LINC00939-203ENST00000545784 RGS3P49796 1198 aa12.84□□□□□ -0.35
LINC00939-203ENST00000545784 DALRD3Q5D0E6 543 aaKnown RBP12.84□□□□□ -0.35
LINC00939-203ENST00000545784 SLC51AQ86UW1 340 aa12.84□□□□□ -0.35
LINC00939-203ENST00000545784 COL4A1P02462 1669 aa12.84□□□□□ -0.35
LINC00939-203ENST00000545784 RPS8P62241 208 aaKnown RBP12.84□□□□□ -0.35
LINC00939-203ENST00000545784 PRPF40BQ6NWY9 871 aaKnown RBP12.84□□□□□ -0.35
LINC00939-203ENST00000545784 SKAP1Q86WV1 359 aa12.84□□□□□ -0.35
LINC00939-203ENST00000545784 IL27Q8NEV9 243 aa12.84□□□□□ -0.35
LINC00939-203ENST00000545784 LAMB2P55268 1798 aa12.84□□□□□ -0.35
LINC00939-203ENST00000545784 ATP8B2P98198 1209 aa12.83□□□□□ -0.36
LINC00939-203ENST00000545784 CHMP4BQ9H444 224 aaKnown RBP12.83□□□□□ -0.36
LINC00939-203ENST00000545784 WWC3Q9ULE0 1092 aa12.83□□□□□ -0.36
LINC00939-203ENST00000545784 YBX3P16989 372 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC00939-203ENST00000545784 IFIT5Q13325 482 aaKnown RBP12.82□□□□□ -0.36
LINC00939-203ENST00000545784 PNMA6EA0A0J9YXQ4 647 aa12.82□□□□□ -0.36
LINC00939-203ENST00000545784 ANKRD18BA2A2Z9 1011 aa12.82□□□□□ -0.36
LINC00939-203ENST00000545784 POLA2Q14181 598 aa12.82□□□□□ -0.36
LINC00939-203ENST00000545784 CEP85Q6P2H3 762 aa12.82□□□□□ -0.36
LINC00939-203ENST00000545784 OLFM4Q6UX06 510 aa12.82□□□□□ -0.36
LINC00939-203ENST00000545784 SIRT2Q8IXJ6 389 aa12.82□□□□□ -0.36
LINC00939-203ENST00000545784 ZNF594Q96JF6 807 aaPredicted RBP12.82□□□□□ -0.36
LINC00939-203ENST00000545784 CHMP3Q9Y3E7 222 aa12.82□□□□□ -0.36
LINC00939-203ENST00000545784 CCDC57Q2TAC2 916 aa12.81□□□□□ -0.36
LINC00939-203ENST00000545784 SP8Q8IXZ3 490 aa12.81□□□□□ -0.36
LINC00939-203ENST00000545784 CDC5LQ99459 802 aaKnown RBP12.81□□□□□ -0.36
LINC00939-203ENST00000545784 UPF2Q9HAU5 1272 aaKnown RBP12.81□□□□□ -0.36
LINC00939-203ENST00000545784 BSDC1Q9NW68 430 aaPredicted RBP12.81□□□□□ -0.36
LINC00939-203ENST00000545784 ATP6V0A2Q9Y487 856 aa12.81□□□□□ -0.36
LINC00939-203ENST00000545784 PPEF1O14829 653 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms