RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 IARSP41252 1262 aaKnown RBP20.02■□□□□ 0.8
CCDC78-216ENST00000544996 CCDC152Q4G0S7 254 aa20.02■□□□□ 0.8
CCDC78-216ENST00000544996 JDP2Q8WYK2 163 aa20.01■□□□□ 0.79
CCDC78-216ENST00000544996 RRAGCQ9HB90 399 aa20.01■□□□□ 0.79
CCDC78-216ENST00000544996 F6X3S4 739 aa20■□□□□ 0.79
CCDC78-216ENST00000544996 GCKRQ14397 625 aa20■□□□□ 0.79
CCDC78-216ENST00000544996 UBE3BQ7Z3V4 1068 aa20■□□□□ 0.79
CCDC78-216ENST00000544996 C16orf71Q8IYS4 520 aaPredicted RBP20■□□□□ 0.79
CCDC78-216ENST00000544996 TRMT2AQ8IZ69 625 aaKnown RBP20■□□□□ 0.79
CCDC78-216ENST00000544996 SUPT20HQ8NEM7 779 aa20■□□□□ 0.79
CCDC78-216ENST00000544996 H7C1W4 665 aa19.99■□□□□ 0.79
CCDC78-216ENST00000544996 RPS8P62241 208 aaKnown RBP19.99■□□□□ 0.79
CCDC78-216ENST00000544996 DPP8Q6V1X1 898 aaPredicted RBP19.99■□□□□ 0.79
CCDC78-216ENST00000544996 MPNDQ8N594 471 aa19.99■□□□□ 0.79
CCDC78-216ENST00000544996 CELF1Q92879 486 aaKnown RBP19.99■□□□□ 0.79
CCDC78-216ENST00000544996 SNED1Q8TER0 1413 aa19.99■□□□□ 0.79
CCDC78-216ENST00000544996 TOMM70O94826 608 aa19.98■□□□□ 0.79
CCDC78-216ENST00000544996 CT47B1P0C2W7 299 aaPredicted RBP19.98■□□□□ 0.79
CCDC78-216ENST00000544996 VEGFAP15692 232 aaPredicted RBP19.98■□□□□ 0.79
CCDC78-216ENST00000544996 CTSWP56202 376 aa19.98■□□□□ 0.79
CCDC78-216ENST00000544996 LARGE2Q8N3Y3 721 aa19.98■□□□□ 0.79
CCDC78-216ENST00000544996 VPS33BQ9H267 617 aa19.98■□□□□ 0.79
CCDC78-216ENST00000544996 DDX60Q8IY21 1712 aaKnown RBP19.98■□□□□ 0.79
CCDC78-216ENST00000544996 BEND3Q5T5X7 828 aa19.97■□□□□ 0.79
CCDC78-216ENST00000544996 MRPL50Q8N5N7 158 aaKnown RBP19.97■□□□□ 0.79
CCDC78-216ENST00000544996 SSH1Q8WYL5 1049 aa19.97■□□□□ 0.79
CCDC78-216ENST00000544996 LAMB2P55268 1798 aa19.97■□□□□ 0.79
CCDC78-216ENST00000544996 CACNA1FO60840 1977 aa19.97■□□□□ 0.79
CCDC78-216ENST00000544996 TIAM2Q8IVF5 1701 aa19.96■□□□□ 0.79
CCDC78-216ENST00000544996 PPIP5K2O43314 1243 aa19.96■□□□□ 0.79
CCDC78-216ENST00000544996 ALDH1L2Q3SY69 923 aa19.96■□□□□ 0.79
CCDC78-216ENST00000544996 SLC4A10Q6U841 1118 aa19.96■□□□□ 0.79
CCDC78-216ENST00000544996 SLC51AQ86UW1 340 aa19.96■□□□□ 0.79
CCDC78-216ENST00000544996 CCDC85AQ96PX6 553 aaPredicted RBP19.96■□□□□ 0.79
CCDC78-216ENST00000544996 RTFDC1Q9BY42 306 aaPredicted RBP19.96■□□□□ 0.79
CCDC78-216ENST00000544996 SEC31BQ9NQW1 1179 aa19.96■□□□□ 0.79
CCDC78-216ENST00000544996 HNRNPUQ00839 825 aaKnown RBP eCLIP19.95■□□□□ 0.78
CCDC78-216ENST00000544996 TTLL11Q8NHH1 800 aa19.95■□□□□ 0.78
CCDC78-216ENST00000544996 CDC5LQ99459 802 aaKnown RBP19.95■□□□□ 0.78
CCDC78-216ENST00000544996 NSFL1CQ9UNZ2 370 aaKnown RBP19.95■□□□□ 0.78
CCDC78-216ENST00000544996 PTPRCP08575 1304 aa19.95■□□□□ 0.78
CCDC78-216ENST00000544996 CCDC88AQ3V6T2 1871 aa19.94■□□□□ 0.78
CCDC78-216ENST00000544996 FZD9O00144 591 aa19.94■□□□□ 0.78
CCDC78-216ENST00000544996 ALDH1L1O75891 902 aa19.94■□□□□ 0.78
CCDC78-216ENST00000544996 DDNO94850 711 aaPredicted RBP19.94■□□□□ 0.78
CCDC78-216ENST00000544996 EIF6P56537 245 aaKnown RBP19.94■□□□□ 0.78
CCDC78-216ENST00000544996 ANKRD18AQ8IVF6 992 aa19.94■□□□□ 0.78
CCDC78-216ENST00000544996 NIM1KQ8IY84 436 aa19.94■□□□□ 0.78
CCDC78-216ENST00000544996 PLA2G12BQ9BX93 195 aa19.94■□□□□ 0.78
CCDC78-216ENST00000544996 SRCIN1Q9C0H9 1055 aa19.94■□□□□ 0.78
CCDC78-216ENST00000544996 SMC4Q9NTJ3 1288 aa19.94■□□□□ 0.78
CCDC78-216ENST00000544996 AOC3Q16853 763 aa19.93■□□□□ 0.78
CCDC78-216ENST00000544996 BCL2L13Q9BXK5 485 aa19.93■□□□□ 0.78
CCDC78-216ENST00000544996 C9orf78Q9NZ63 289 aaPredicted RBP19.93■□□□□ 0.78
CCDC78-216ENST00000544996 DICER1Q9UPY3 1922 aaKnown RBP19.92■□□□□ 0.78
CCDC78-216ENST00000544996 CASP7P55210 303 aa19.92■□□□□ 0.78
CCDC78-216ENST00000544996 RBM46Q8TBY0 533 aaKnown RBP19.92■□□□□ 0.78
CCDC78-216ENST00000544996 GREM2Q9H772 168 aa19.92■□□□□ 0.78
CCDC78-216ENST00000544996 IQCA1LA6NCM1 817 aa19.91■□□□□ 0.78
CCDC78-216ENST00000544996 GRM8O00222 908 aa19.91■□□□□ 0.78
CCDC78-216ENST00000544996 KIAA2012Q0VF49 1180 aa19.91■□□□□ 0.78
CCDC78-216ENST00000544996 GPC2Q8N158 579 aa19.91■□□□□ 0.78
CCDC78-216ENST00000544996 ANKIB1Q9P2G1 1089 aa19.91■□□□□ 0.78
CCDC78-216ENST00000544996 ZNF541Q9H0D2 1346 aa19.91■□□□□ 0.78
CCDC78-216ENST00000544996 RTL9Q8NET4 1388 aa19.91■□□□□ 0.78
CCDC78-216ENST00000544996 C6orf229H3BNL8 230 aa19.9■□□□□ 0.78
CCDC78-216ENST00000544996 GPSM2P81274 684 aa19.9■□□□□ 0.78
CCDC78-216ENST00000544996 L3MBTL3Q96JM7 780 aaPredicted RBP19.9■□□□□ 0.78
CCDC78-216ENST00000544996 POTECB2RU33 542 aa19.89■□□□□ 0.77
CCDC78-216ENST00000544996 WASHC4Q2M389 1173 aa19.89■□□□□ 0.77
CCDC78-216ENST00000544996 EYA3Q99504 573 aa19.89■□□□□ 0.77
CCDC78-216ENST00000544996 ZNRF3Q9ULT6 936 aa19.89■□□□□ 0.77
CCDC78-216ENST00000544996 CSF1RP07333 972 aa19.88■□□□□ 0.77
CCDC78-216ENST00000544996 ITGA6P23229 1130 aa19.88■□□□□ 0.77
CCDC78-216ENST00000544996 IGHMBP2P38935 993 aaKnown RBP19.88■□□□□ 0.77
CCDC78-216ENST00000544996 FSTL1Q12841 308 aa19.88■□□□□ 0.77
CCDC78-216ENST00000544996 BSDC1Q9NW68 430 aaPredicted RBP19.88■□□□□ 0.77
CCDC78-216ENST00000544996 PODXL2Q9NZ53 605 aa19.88■□□□□ 0.77
CCDC78-216ENST00000544996 GJA3Q9Y6H8 435 aa19.88■□□□□ 0.77
CCDC78-216ENST00000544996 WDR90Q96KV7 1748 aa19.88■□□□□ 0.77
CCDC78-216ENST00000544996 FAM161AQ3B820 660 aa19.87■□□□□ 0.77
CCDC78-216ENST00000544996 SMC1BQ8NDV3 1235 aa19.87■□□□□ 0.77
CCDC78-216ENST00000544996 TBC1D16Q8TBP0 767 aa19.87■□□□□ 0.77
CCDC78-216ENST00000544996 POLLQ9UGP5 575 aa19.87■□□□□ 0.77
CCDC78-216ENST00000544996 GGA1Q9UJY5 639 aa19.87■□□□□ 0.77
CCDC78-216ENST00000544996 TAF1P21675 1872 aa19.86■□□□□ 0.77
CCDC78-216ENST00000544996 LRRC37AA6NMS7 1700 aa19.86■□□□□ 0.77
CCDC78-216ENST00000544996 UFL1O94874 794 aa19.86■□□□□ 0.77
CCDC78-216ENST00000544996 FOXO4P98177 505 aa19.86■□□□□ 0.77
CCDC78-216ENST00000544996 MPHOSPH8Q99549 860 aa19.86■□□□□ 0.77
CCDC78-216ENST00000544996 ZC3H12CQ9C0D7 883 aaKnown RBP19.86■□□□□ 0.77
CCDC78-216ENST00000544996 HACL1Q9UJ83 578 aa19.86■□□□□ 0.77
CCDC78-216ENST00000544996 CHMP3Q9Y3E7 222 aa19.86■□□□□ 0.77
CCDC78-216ENST00000544996 COL4A5P29400 1685 aa19.85■□□□□ 0.77
CCDC78-216ENST00000544996 XDHP47989 1333 aa19.85■□□□□ 0.77
CCDC78-216ENST00000544996 ANKRD18BA2A2Z9 1011 aa19.85■□□□□ 0.77
CCDC78-216ENST00000544996 RIMBP2O15034 1052 aa19.85■□□□□ 0.77
CCDC78-216ENST00000544996 HSPA6P17066 643 aa19.85■□□□□ 0.77
CCDC78-216ENST00000544996 RARSP54136 660 aaKnown RBP19.85■□□□□ 0.77
CCDC78-216ENST00000544996 BRPF1P55201 1214 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms