RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 ZNF428Q96B54 188 aa17.83■□□□□ 0.44
VAMP1-208ENST00000544432 WDR90Q96KV7 1748 aa17.83■□□□□ 0.44
VAMP1-208ENST00000544432 CEP350Q5VT06 3117 aa17.83■□□□□ 0.44
VAMP1-208ENST00000544432 LAMB2P55268 1798 aa17.82■□□□□ 0.44
VAMP1-208ENST00000544432 DDNO94850 711 aaPredicted RBP17.82■□□□□ 0.44
VAMP1-208ENST00000544432 FLIIQ13045 1269 aa17.82■□□□□ 0.44
VAMP1-208ENST00000544432 SUPT20HQ8NEM7 779 aa17.82■□□□□ 0.44
VAMP1-208ENST00000544432 JDP2Q8WYK2 163 aa17.82■□□□□ 0.44
VAMP1-208ENST00000544432 L3MBTL3Q96JM7 780 aaPredicted RBP17.82■□□□□ 0.44
VAMP1-208ENST00000544432 RTL5Q5HYW3 569 aaPredicted RBP17.81■□□□□ 0.44
VAMP1-208ENST00000544432 DDX60Q8IY21 1712 aaKnown RBP17.81■□□□□ 0.44
VAMP1-208ENST00000544432 CACNA1FO60840 1977 aa17.8■□□□□ 0.44
VAMP1-208ENST00000544432 CDHR2Q9BYE9 1310 aa17.8■□□□□ 0.44
VAMP1-208ENST00000544432 PDE8AO60658 829 aa17.8■□□□□ 0.44
VAMP1-208ENST00000544432 MPNDQ8N594 471 aa17.8■□□□□ 0.44
VAMP1-208ENST00000544432 SMC1BQ8NDV3 1235 aa17.8■□□□□ 0.44
VAMP1-208ENST00000544432 IQCA1LA6NCM1 817 aa17.79■□□□□ 0.44
VAMP1-208ENST00000544432 NEURL1BA8MQ27 555 aa17.79■□□□□ 0.44
VAMP1-208ENST00000544432 DPP8Q6V1X1 898 aaPredicted RBP17.79■□□□□ 0.44
VAMP1-208ENST00000544432 SLC51AQ86UW1 340 aa17.79■□□□□ 0.44
VAMP1-208ENST00000544432 LARGE2Q8N3Y3 721 aa17.79■□□□□ 0.44
VAMP1-208ENST00000544432 CELF1Q92879 486 aaKnown RBP17.79■□□□□ 0.44
VAMP1-208ENST00000544432 ZNF541Q9H0D2 1346 aa17.78■□□□□ 0.44
VAMP1-208ENST00000544432 E9PSI1 815 aa17.78■□□□□ 0.44
VAMP1-208ENST00000544432 H7C1W4 665 aa17.78■□□□□ 0.44
VAMP1-208ENST00000544432 RPS8P62241 208 aaKnown RBP17.78■□□□□ 0.44
VAMP1-208ENST00000544432 FKBP5Q13451 457 aaPredicted RBP17.78■□□□□ 0.44
VAMP1-208ENST00000544432 CCDC152Q4G0S7 254 aa17.78■□□□□ 0.44
VAMP1-208ENST00000544432 GPC2Q8N158 579 aa17.78■□□□□ 0.44
VAMP1-208ENST00000544432 DNAAF4Q8WXU2 420 aa17.78■□□□□ 0.44
VAMP1-208ENST00000544432 PPIP5K2O43314 1243 aa17.77■□□□□ 0.44
VAMP1-208ENST00000544432 APLP1P51693 650 aa17.77■□□□□ 0.44
VAMP1-208ENST00000544432 EIF6P56537 245 aaKnown RBP17.77■□□□□ 0.44
VAMP1-208ENST00000544432 LINS1Q8NG48 757 aa17.77■□□□□ 0.44
VAMP1-208ENST00000544432 KIAA2012Q0VF49 1180 aa17.76■□□□□ 0.43
VAMP1-208ENST00000544432 GCKRQ14397 625 aa17.76■□□□□ 0.43
VAMP1-208ENST00000544432 CWF19L2Q2TBE0 894 aaKnown RBP17.76■□□□□ 0.43
VAMP1-208ENST00000544432 NIM1KQ8IY84 436 aa17.76■□□□□ 0.43
VAMP1-208ENST00000544432 SLFN5Q08AF3 891 aa17.75■□□□□ 0.43
VAMP1-208ENST00000544432 AOC3Q16853 763 aa17.75■□□□□ 0.43
VAMP1-208ENST00000544432 JARID2Q92833 1246 aaPredicted RBP17.75■□□□□ 0.43
VAMP1-208ENST00000544432 COL4A5P29400 1685 aa17.74■□□□□ 0.43
VAMP1-208ENST00000544432 CTSWP56202 376 aa17.74■□□□□ 0.43
VAMP1-208ENST00000544432 TTLL11Q8NHH1 800 aa17.74■□□□□ 0.43
VAMP1-208ENST00000544432 PLA2G12BQ9BX93 195 aa17.74■□□□□ 0.43
VAMP1-208ENST00000544432 TAF1DQ9H5J8 278 aaPredicted RBP17.74■□□□□ 0.43
VAMP1-208ENST00000544432 SEC31BQ9NQW1 1179 aa17.74■□□□□ 0.43
VAMP1-208ENST00000544432 HACL1Q9UJ83 578 aa17.74■□□□□ 0.43
VAMP1-208ENST00000544432 ZNRF3Q9ULT6 936 aa17.74■□□□□ 0.43
VAMP1-208ENST00000544432 LRRC37AA6NMS7 1700 aa17.73■□□□□ 0.43
VAMP1-208ENST00000544432 SCN4AP35499 1836 aa17.73■□□□□ 0.43
VAMP1-208ENST00000544432 CASP7P55210 303 aa17.73■□□□□ 0.43
VAMP1-208ENST00000544432 PODXL2Q9NZ53 605 aa17.73■□□□□ 0.43
VAMP1-208ENST00000544432 NSFL1CQ9UNZ2 370 aaKnown RBP17.73■□□□□ 0.43
VAMP1-208ENST00000544432 RTL9Q8NET4 1388 aa17.73■□□□□ 0.43
VAMP1-208ENST00000544432 TAF1P21675 1872 aa17.72■□□□□ 0.43
VAMP1-208ENST00000544432 BEND3Q5T5X7 828 aa17.72■□□□□ 0.43
VAMP1-208ENST00000544432 UBE3BQ7Z3V4 1068 aa17.72■□□□□ 0.43
VAMP1-208ENST00000544432 TRMT2AQ8IZ69 625 aaKnown RBP17.72■□□□□ 0.43
VAMP1-208ENST00000544432 GPSM2P81274 684 aa17.71■□□□□ 0.43
VAMP1-208ENST00000544432 CHADLQ6NUI6 762 aa17.71■□□□□ 0.43
VAMP1-208ENST00000544432 PNMA8AQ86V59 439 aaPredicted RBP17.71■□□□□ 0.43
VAMP1-208ENST00000544432 LDHDQ86WU2 507 aa17.71■□□□□ 0.43
VAMP1-208ENST00000544432 ANKRD18AQ8IVF6 992 aa17.71■□□□□ 0.43
VAMP1-208ENST00000544432 CDC5LQ99459 802 aaKnown RBP17.71■□□□□ 0.43
VAMP1-208ENST00000544432 POLLQ9UGP5 575 aa17.71■□□□□ 0.43
VAMP1-208ENST00000544432 F6X3S4 739 aa17.7■□□□□ 0.42
VAMP1-208ENST00000544432 EPHX2P34913 555 aa17.7■□□□□ 0.42
VAMP1-208ENST00000544432 CXCL9Q07325 125 aa17.7■□□□□ 0.42
VAMP1-208ENST00000544432 WASHC4Q2M389 1173 aa17.7■□□□□ 0.42
VAMP1-208ENST00000544432 EYA3Q99504 573 aa17.7■□□□□ 0.42
VAMP1-208ENST00000544432 GJA3Q9Y6H8 435 aa17.7■□□□□ 0.42
VAMP1-208ENST00000544432 DUOX1Q9NRD9 1551 aa17.7■□□□□ 0.42
VAMP1-208ENST00000544432 COL4A1P02462 1669 aa17.69■□□□□ 0.42
VAMP1-208ENST00000544432 C6orf229H3BNL8 230 aa17.69■□□□□ 0.42
VAMP1-208ENST00000544432 ALDH1L1O75891 902 aa17.69■□□□□ 0.42
VAMP1-208ENST00000544432 CSF1RP07333 972 aa17.69■□□□□ 0.42
VAMP1-208ENST00000544432 TBC1D16Q8TBP0 767 aa17.69■□□□□ 0.42
VAMP1-208ENST00000544432 CCDC85AQ96PX6 553 aaPredicted RBP17.69■□□□□ 0.42
VAMP1-208ENST00000544432 GREM2Q9H772 168 aa17.69■□□□□ 0.42
VAMP1-208ENST00000544432 BSDC1Q9NW68 430 aaPredicted RBP17.69■□□□□ 0.42
VAMP1-208ENST00000544432 POTEIP0CG38 1075 aa17.68■□□□□ 0.42
VAMP1-208ENST00000544432 POTEJP0CG39 1038 aa17.68■□□□□ 0.42
VAMP1-208ENST00000544432 LMOD1P29536 600 aaPredicted RBP17.68■□□□□ 0.42
VAMP1-208ENST00000544432 SCNN1DP51172 638 aa17.68■□□□□ 0.42
VAMP1-208ENST00000544432 TNIP1Q15025 636 aa17.68■□□□□ 0.42
VAMP1-208ENST00000544432 DIEXFQ68CQ4 756 aaKnown RBP17.68■□□□□ 0.42
VAMP1-208ENST00000544432 MRPL50Q8N5N7 158 aaKnown RBP17.68■□□□□ 0.42
VAMP1-208ENST00000544432 DNAJC5GQ8N7S2 189 aa17.68■□□□□ 0.42
VAMP1-208ENST00000544432 CDCA7LQ96GN5 454 aa17.68■□□□□ 0.42
VAMP1-208ENST00000544432 CT47B1P0C2W7 299 aaPredicted RBP17.67■□□□□ 0.42
VAMP1-208ENST00000544432 ALDH1L2Q3SY69 923 aa17.67■□□□□ 0.42
VAMP1-208ENST00000544432 CIAPIN1Q6FI81 312 aa17.67■□□□□ 0.42
VAMP1-208ENST00000544432 ANKIB1Q9P2G1 1089 aa17.67■□□□□ 0.42
VAMP1-208ENST00000544432 GGA1Q9UJY5 639 aa17.67■□□□□ 0.42
VAMP1-208ENST00000544432 PTPRCP08575 1304 aa17.67■□□□□ 0.42
VAMP1-208ENST00000544432 YDJCA8MPS7 323 aa17.66■□□□□ 0.42
VAMP1-208ENST00000544432 ZC3H12CQ9C0D7 883 aaKnown RBP17.66■□□□□ 0.42
VAMP1-208ENST00000544432 LTBP1Q14766 1721 aa17.66■□□□□ 0.42
VAMP1-208ENST00000544432 XDHP47989 1333 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms