RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 LSG1Q9H089 658 aaKnown RBP19.44■□□□□ 0.7
SPDEF-202ENST00000544425 SNRKQ9NRH2 765 aa19.44■□□□□ 0.7
SPDEF-202ENST00000544425 CHMP5Q9NZZ3 219 aa19.44■□□□□ 0.7
SPDEF-202ENST00000544425 UBN2Q6ZU65 1347 aa19.44■□□□□ 0.7
SPDEF-202ENST00000544425 DDIT3P35638 169 aa19.43■□□□□ 0.7
SPDEF-202ENST00000544425 CTSWP56202 376 aa19.43■□□□□ 0.7
SPDEF-202ENST00000544425 PARP10Q53GL7 1025 aa19.43■□□□□ 0.7
SPDEF-202ENST00000544425 KIAA1211Q6ZU35 1233 aa19.43■□□□□ 0.7
SPDEF-202ENST00000544425 CEP126Q9P2H0 1117 aa19.43■□□□□ 0.7
SPDEF-202ENST00000544425 RAD50Q92878 1312 aa19.43■□□□□ 0.7
SPDEF-202ENST00000544425 THSD7AQ9UPZ6 1657 aa19.43■□□□□ 0.7
SPDEF-202ENST00000544425 RGL2O15211 777 aa19.43■□□□□ 0.7
SPDEF-202ENST00000544425 SYNE4Q8N205 404 aa19.43■□□□□ 0.7
SPDEF-202ENST00000544425 HAUS7Q99871 368 aa19.43■□□□□ 0.7
SPDEF-202ENST00000544425 PUS3Q9BZE2 481 aaKnown RBP19.42■□□□□ 0.7
SPDEF-202ENST00000544425 AKAP2Q9Y2D5 859 aa19.42■□□□□ 0.7
SPDEF-202ENST00000544425 AFF2P51816 1311 aa19.41■□□□□ 0.7
SPDEF-202ENST00000544425 RC3H1Q5TC82 1133 aaKnown RBP19.41■□□□□ 0.7
SPDEF-202ENST00000544425 CLEC4GQ6UXB4 293 aa19.41■□□□□ 0.7
SPDEF-202ENST00000544425 SPRYD3Q8NCJ5 442 aa19.41■□□□□ 0.7
SPDEF-202ENST00000544425 CIZ1Q9ULV3 898 aaPredicted RBP19.41■□□□□ 0.7
SPDEF-202ENST00000544425 RFX7Q2KHR2 1363 aa19.41■□□□□ 0.7
SPDEF-202ENST00000544425 CNTNAP4Q9C0A0 1308 aa19.41■□□□□ 0.7
SPDEF-202ENST00000544425 TAF7LQ5H9L4 462 aa19.41■□□□□ 0.7
SPDEF-202ENST00000544425 LINC00116Q8NCU8 138 aa19.41■□□□□ 0.7
SPDEF-202ENST00000544425 TRPC5Q9UL62 973 aaPredicted RBP19.41■□□□□ 0.7
SPDEF-202ENST00000544425 PALD1Q9ULE6 856 aa19.41■□□□□ 0.7
SPDEF-202ENST00000544425 ANKRD18BA2A2Z9 1011 aa19.4■□□□□ 0.7
SPDEF-202ENST00000544425 HSP90B1P14625 803 aaKnown RBP19.4■□□□□ 0.7
SPDEF-202ENST00000544425 ITGA6P23229 1130 aa19.4■□□□□ 0.7
SPDEF-202ENST00000544425 MCM2P49736 904 aa19.4■□□□□ 0.7
SPDEF-202ENST00000544425 TIMM10P62072 90 aa19.4■□□□□ 0.7
SPDEF-202ENST00000544425 SUSD4Q5VX71 490 aa19.4■□□□□ 0.7
SPDEF-202ENST00000544425 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.4■□□□□ 0.7
SPDEF-202ENST00000544425 NEUROD6Q96NK8 337 aa19.4■□□□□ 0.7
SPDEF-202ENST00000544425 FSD1Q9BTV5 496 aa19.4■□□□□ 0.7
SPDEF-202ENST00000544425 UTP14AQ9BVJ6 771 aaKnown RBP19.4■□□□□ 0.7
SPDEF-202ENST00000544425 RIPOR2Q9Y4F9 1068 aa19.4■□□□□ 0.7
SPDEF-202ENST00000544425 KAT6BQ8WYB5 2073 aa19.4■□□□□ 0.7
SPDEF-202ENST00000544425 ATRNO75882 1429 aa19.4■□□□□ 0.7
SPDEF-202ENST00000544425 SH3TC1Q8TE82 1336 aa19.39■□□□□ 0.7
SPDEF-202ENST00000544425 A0A1B0GUL7 405 aa19.39■□□□□ 0.7
SPDEF-202ENST00000544425 GREM2Q9H772 168 aa19.39■□□□□ 0.7
SPDEF-202ENST00000544425 ZNF652Q9Y2D9 606 aa19.39■□□□□ 0.7
SPDEF-202ENST00000544425 ANKRD36CQ5JPF3 1778 aa19.39■□□□□ 0.69
SPDEF-202ENST00000544425 ZNF609O15014 1411 aa19.39■□□□□ 0.69
SPDEF-202ENST00000544425 NEK4P51957 841 aa19.37■□□□□ 0.69
SPDEF-202ENST00000544425 NMIQ13287 307 aaPredicted RBP19.37■□□□□ 0.69
SPDEF-202ENST00000544425 LDHAL6AQ6ZMR3 332 aa19.37■□□□□ 0.69
SPDEF-202ENST00000544425 KCNB2Q92953 911 aa19.37■□□□□ 0.69
SPDEF-202ENST00000544425 CCDC85AQ96PX6 553 aaPredicted RBP19.37■□□□□ 0.69
SPDEF-202ENST00000544425 NUP98P52948 1817 aa19.37■□□□□ 0.69
SPDEF-202ENST00000544425 HSP90AA1P07900 732 aaKnown RBP19.37■□□□□ 0.69
SPDEF-202ENST00000544425 PTF1AQ7RTS3 328 aa19.37■□□□□ 0.69
SPDEF-202ENST00000544425 FAM227BQ96M60 508 aa19.37■□□□□ 0.69
SPDEF-202ENST00000544425 NIP7Q9Y221 180 aaKnown RBP eCLIP19.36■□□□□ 0.69
SPDEF-202ENST00000544425 AK9Q5TCS8 1911 aa19.35■□□□□ 0.69
SPDEF-202ENST00000544425 NTSR2O95665 410 aa19.35■□□□□ 0.69
SPDEF-202ENST00000544425 KBTBD3Q8NAB2 608 aa19.35■□□□□ 0.69
SPDEF-202ENST00000544425 MAP4K1Q92918 833 aa19.35■□□□□ 0.69
SPDEF-202ENST00000544425 SNX14Q9Y5W7 946 aa19.35■□□□□ 0.69
SPDEF-202ENST00000544425 COL5A3P25940 1745 aaPredicted RBP19.35■□□□□ 0.69
SPDEF-202ENST00000544425 CCDC171Q6TFL3 1326 aa19.35■□□□□ 0.69
SPDEF-202ENST00000544425 RPS6KA4O75676 772 aa19.35■□□□□ 0.69
SPDEF-202ENST00000544425 PTH1RQ03431 593 aa19.35■□□□□ 0.69
SPDEF-202ENST00000544425 NECTIN1Q15223 517 aa19.35■□□□□ 0.69
SPDEF-202ENST00000544425 CCDC158Q5M9N0 1113 aa19.35■□□□□ 0.69
SPDEF-202ENST00000544425 EDC3Q96F86 508 aaKnown RBP19.35■□□□□ 0.69
SPDEF-202ENST00000544425 DNAJC2Q99543 621 aaKnown RBP19.35■□□□□ 0.69
SPDEF-202ENST00000544425 A0A0D9SFI3 127 aa19.34■□□□□ 0.69
SPDEF-202ENST00000544425 FRAT2O75474 233 aaPredicted RBP19.34■□□□□ 0.69
SPDEF-202ENST00000544425 SEPT12Q8IYM1 358 aa19.34■□□□□ 0.69
SPDEF-202ENST00000544425 MED23Q9ULK4 1368 aa19.34■□□□□ 0.69
SPDEF-202ENST00000544425 MYH14Q7Z406 1995 aaKnown RBP19.33■□□□□ 0.69
SPDEF-202ENST00000544425 IFIT1P09914 478 aaKnown RBP19.33■□□□□ 0.69
SPDEF-202ENST00000544425 METTL24Q5JXM2 366 aa19.33■□□□□ 0.69
SPDEF-202ENST00000544425 XAGE2Q96GT9 111 aa19.33■□□□□ 0.69
SPDEF-202ENST00000544425 CNNM1Q9NRU3 951 aa19.33■□□□□ 0.69
SPDEF-202ENST00000544425 PAG1Q9NWQ8 432 aa19.33■□□□□ 0.69
SPDEF-202ENST00000544425 NHSQ6T4R5 1651 aa19.33■□□□□ 0.68
SPDEF-202ENST00000544425 RTL9Q8NET4 1388 aa19.33■□□□□ 0.68
SPDEF-202ENST00000544425 VGLL2Q8N8G2 317 aa19.33■□□□□ 0.68
SPDEF-202ENST00000544425 CWC22Q9HCG8 908 aaKnown RBP19.33■□□□□ 0.68
SPDEF-202ENST00000544425 HCLS1P14317 486 aaPredicted RBP19.32■□□□□ 0.68
SPDEF-202ENST00000544425 RASEFQ8IZ41 740 aa19.32■□□□□ 0.68
SPDEF-202ENST00000544425 TM6SF1Q9BZW5 370 aa19.32■□□□□ 0.68
SPDEF-202ENST00000544425 QTRT2Q9H974 415 aaKnown RBP19.32■□□□□ 0.68
SPDEF-202ENST00000544425 ABCC12Q96J65 1359 aa19.31■□□□□ 0.68
SPDEF-202ENST00000544425 PDE8BO95263 885 aa19.31■□□□□ 0.68
SPDEF-202ENST00000544425 DEKP35659 375 aaKnown RBP19.31■□□□□ 0.68
SPDEF-202ENST00000544425 CCDC152Q4G0S7 254 aa19.31■□□□□ 0.68
SPDEF-202ENST00000544425 ZNF512BQ96KM6 892 aaPredicted RBP19.31■□□□□ 0.68
SPDEF-202ENST00000544425 NARFQ9UHQ1 456 aa19.31■□□□□ 0.68
SPDEF-202ENST00000544425 CCNL1Q9UK58 526 aaPredicted RBP19.31■□□□□ 0.68
SPDEF-202ENST00000544425 RIC1Q4ADV7 1423 aa19.31■□□□□ 0.68
SPDEF-202ENST00000544425 MROH5Q6ZUA9 1318 aa19.31■□□□□ 0.68
SPDEF-202ENST00000544425 ATP2B3Q16720 1220 aa19.31■□□□□ 0.68
SPDEF-202ENST00000544425 FAM182BQ5T319 152 aa19.31■□□□□ 0.68
SPDEF-202ENST00000544425 GORABQ5T7V8 394 aa19.31■□□□□ 0.68
SPDEF-202ENST00000544425 DDX46Q7L014 1031 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms