RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 FOXD4L6Q3SYB3 417 aaPredicted RBP14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 UTP14CQ5TAP6 766 aaKnown RBP14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 FOXD4L3Q6VB84 417 aaPredicted RBP14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 ZCRB1Q8TBF4 217 aaKnown RBP14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 CCDC94Q9BW85 323 aaPredicted RBP14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 PRDM11Q9NQV5 511 aa14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 MED23Q9ULK4 1368 aa14.64□□□□□ -0.07
LRTOMT-221ENST00000544409 SYCE3A1L190 88 aa14.64□□□□□ -0.07
LRTOMT-221ENST00000544409 ATP5JP18859 108 aa14.64□□□□□ -0.07
LRTOMT-221ENST00000544409 TFCP2Q12800 502 aa14.64□□□□□ -0.07
LRTOMT-221ENST00000544409 TOM1L2Q6ZVM7 507 aa14.64□□□□□ -0.07
LRTOMT-221ENST00000544409 BRINP3Q76B58 766 aa14.64□□□□□ -0.07
LRTOMT-221ENST00000544409 CCDC83Q8IWF9 413 aa14.64□□□□□ -0.07
LRTOMT-221ENST00000544409 SLC27A2O14975 620 aa14.64□□□□□ -0.07
LRTOMT-221ENST00000544409 ZNF500O60304 480 aaPredicted RBP14.64□□□□□ -0.07
LRTOMT-221ENST00000544409 LARGE1O95461 756 aa14.64□□□□□ -0.07
LRTOMT-221ENST00000544409 SYT1P21579 422 aa14.64□□□□□ -0.07
LRTOMT-221ENST00000544409 CBX1P83916 185 aa14.64□□□□□ -0.07
LRTOMT-221ENST00000544409 USP48Q86UV5 1035 aa14.64□□□□□ -0.07
LRTOMT-221ENST00000544409 TCHHQ07283 1943 aa14.64□□□□□ -0.07
LRTOMT-221ENST00000544409 DBNLQ9UJU6 430 aaKnown RBP14.63□□□□□ -0.07
LRTOMT-221ENST00000544409 ATP6V1DQ9Y5K8 247 aa14.63□□□□□ -0.07
LRTOMT-221ENST00000544409 CASP7P55210 303 aa14.63□□□□□ -0.07
LRTOMT-221ENST00000544409 PPP4R3BQ5MIZ7 849 aa14.63□□□□□ -0.07
LRTOMT-221ENST00000544409 TMEM87AQ8NBN3 555 aa14.63□□□□□ -0.07
LRTOMT-221ENST00000544409 UBR2Q8IWV8 1755 aa14.63□□□□□ -0.07
LRTOMT-221ENST00000544409 ERVV-2B6SEH9 535 aa14.63□□□□□ -0.07
LRTOMT-221ENST00000544409 GDPD2Q9HCC8 539 aa14.63□□□□□ -0.07
LRTOMT-221ENST00000544409 F13A1P00488 732 aa14.62□□□□□ -0.07
LRTOMT-221ENST00000544409 GJB2P29033 226 aa14.62□□□□□ -0.07
LRTOMT-221ENST00000544409 RFX7Q2KHR2 1363 aa14.62□□□□□ -0.07
LRTOMT-221ENST00000544409 NBPF26B4DH59 902 aa14.62□□□□□ -0.07
LRTOMT-221ENST00000544409 HSPA2P54652 639 aa14.62□□□□□ -0.07
LRTOMT-221ENST00000544409 NBPF14Q5TI25 921 aa14.62□□□□□ -0.07
LRTOMT-221ENST00000544409 NBPF10Q6P3W6 841 aaKnown RBP14.62□□□□□ -0.07
LRTOMT-221ENST00000544409 NBPF15Q8N660 670 aa14.62□□□□□ -0.07
LRTOMT-221ENST00000544409 TSC1Q92574 1164 aa14.62□□□□□ -0.07
LRTOMT-221ENST00000544409 JCADQ9P266 1359 aa14.62□□□□□ -0.07
LRTOMT-221ENST00000544409 GADD45BO75293 160 aaPredicted RBP14.61□□□□□ -0.07
LRTOMT-221ENST00000544409 PHF14O94880 888 aa14.61□□□□□ -0.07
LRTOMT-221ENST00000544409 DDX54Q8TDD1 881 aaKnown RBP14.61□□□□□ -0.07
LRTOMT-221ENST00000544409 HMG20BQ9P0W2 317 aa14.61□□□□□ -0.07
LRTOMT-221ENST00000544409 NAP1L2Q9ULW6 460 aaPredicted RBP14.61□□□□□ -0.07
LRTOMT-221ENST00000544409 NUP188Q5SRE5 1749 aa14.61□□□□□ -0.07
LRTOMT-221ENST00000544409 BLOC1S2Q6QNY1 142 aa14.61□□□□□ -0.07
LRTOMT-221ENST00000544409 LMBR1LQ6UX01 489 aa14.61□□□□□ -0.07
LRTOMT-221ENST00000544409 H7C1W4 665 aa14.61□□□□□ -0.07
LRTOMT-221ENST00000544409 ANKRD1Q15327 319 aa14.61□□□□□ -0.07
LRTOMT-221ENST00000544409 ME3Q16798 604 aa14.61□□□□□ -0.07
LRTOMT-221ENST00000544409 CWC25Q9NXE8 425 aaPredicted RBP14.61□□□□□ -0.07
LRTOMT-221ENST00000544409 CNPY2Q9Y2B0 182 aa14.61□□□□□ -0.07
LRTOMT-221ENST00000544409 CHMP3Q9Y3E7 222 aa14.61□□□□□ -0.07
LRTOMT-221ENST00000544409 COL5A2P05997 1499 aaPredicted RBP14.6□□□□□ -0.07
LRTOMT-221ENST00000544409 SASS6Q6UVJ0 657 aa14.6□□□□□ -0.07
LRTOMT-221ENST00000544409 ZNF589Q86UQ0 364 aaPredicted RBP14.6□□□□□ -0.07
LRTOMT-221ENST00000544409 EDC3Q96F86 508 aaKnown RBP14.6□□□□□ -0.07
LRTOMT-221ENST00000544409 PAPPAQ13219 1627 aa14.6□□□□□ -0.07
LRTOMT-221ENST00000544409 DBNDD2Q9BQY9 259 aa14.6□□□□□ -0.07
LRTOMT-221ENST00000544409 KCPQ6ZWJ8 1503 aa14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 TAF5LO75529 589 aa14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 PDIA4P13667 645 aaKnown RBP14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 IL2RBP14784 551 aa14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 FOXO4P98177 505 aa14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 NKX1-1Q15270 411 aaPredicted RBP14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 CSPP1Q1MSJ5 1256 aa14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 TTLL7Q6ZT98 887 aa14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 DNAJC2Q99543 621 aaKnown RBP14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 TSPY26PQ9H489 355 aa14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 HS1BP3Q53T59 392 aa14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 HAUS7Q99871 368 aa14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 ALDH8A1Q9H2A2 487 aaPredicted RBP14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 TPCN1Q9ULQ1 816 aa14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 ZKSCAN5Q9Y2L8 839 aa14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 SOS2Q07890 1332 aaPredicted RBP14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 RPS6KB1P23443 525 aa14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 ST3GAL1Q11201 340 aa14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 TSGA10IPQ3SY00 556 aa14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 CARD10Q9BWT7 1032 aa14.59□□□□□ -0.07
LRTOMT-221ENST00000544409 TJP1Q07157 1748 aa14.58□□□□□ -0.08
LRTOMT-221ENST00000544409 KRT32Q14532 448 aa14.58□□□□□ -0.08
LRTOMT-221ENST00000544409 NECAB1Q8N987 351 aa14.58□□□□□ -0.08
LRTOMT-221ENST00000544409 MTMR6Q9Y217 621 aa14.58□□□□□ -0.08
LRTOMT-221ENST00000544409 A1BGP04217 495 aa14.58□□□□□ -0.08
LRTOMT-221ENST00000544409 UBE2HP62256 183 aa14.58□□□□□ -0.08
LRTOMT-221ENST00000544409 USPL1Q5W0Q7 1092 aa14.57□□□□□ -0.08
LRTOMT-221ENST00000544409 CCDC191Q8NCU4 936 aa14.57□□□□□ -0.08
LRTOMT-221ENST00000544409 PDLIM2Q96JY6 352 aa14.57□□□□□ -0.08
LRTOMT-221ENST00000544409 ABCA3Q99758 1704 aa14.57□□□□□ -0.08
LRTOMT-221ENST00000544409 SHANK3Q9BYB0 1731 aa14.57□□□□□ -0.08
LRTOMT-221ENST00000544409 DNTTIP2Q5QJE6 756 aaKnown RBP14.57□□□□□ -0.08
LRTOMT-221ENST00000544409 GPR108Q9NPR9 543 aa14.57□□□□□ -0.08
LRTOMT-221ENST00000544409 U3KPZ7 1027 aaPredicted RBP14.57□□□□□ -0.08
LRTOMT-221ENST00000544409 ZNF609O15014 1411 aa14.56□□□□□ -0.08
LRTOMT-221ENST00000544409 VPS37CA5D8V6 355 aaPredicted RBP14.56□□□□□ -0.08
LRTOMT-221ENST00000544409 IGSF3O75054 1194 aa14.56□□□□□ -0.08
LRTOMT-221ENST00000544409 MCMDC2Q4G0Z9 681 aa14.56□□□□□ -0.08
LRTOMT-221ENST00000544409 CCDC183Q5T5S1 534 aa14.56□□□□□ -0.08
LRTOMT-221ENST00000544409 ZBTB3Q9H5J0 574 aa14.56□□□□□ -0.08
LRTOMT-221ENST00000544409 SLAIN2Q9P270 581 aa14.56□□□□□ -0.08
LRTOMT-221ENST00000544409 FAM177BA6PVY3 158 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms