RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 RFX5P48382 616 aaPredicted RBP18.88■□□□□ 0.61
SNRNP70-203ENST00000544278 ZNF830Q96NB3 372 aaPredicted RBP18.88■□□□□ 0.61
SNRNP70-203ENST00000544278 ASAP1Q9ULH1 1129 aa18.88■□□□□ 0.61
SNRNP70-203ENST00000544278 SPATA31A3Q5VYP0 1347 aa18.88■□□□□ 0.61
SNRNP70-203ENST00000544278 WDR33Q9C0J8 1336 aaKnown RBP18.88■□□□□ 0.61
SNRNP70-203ENST00000544278 ZSCAN22P10073 491 aaPredicted RBP18.87■□□□□ 0.61
SNRNP70-203ENST00000544278 GIMAP6Q6P9H5 292 aa18.87■□□□□ 0.61
SNRNP70-203ENST00000544278 CDC37L1Q7L3B6 337 aa18.87■□□□□ 0.61
SNRNP70-203ENST00000544278 HSP90B1P14625 803 aaKnown RBP18.87■□□□□ 0.61
SNRNP70-203ENST00000544278 ZNF445P59923 1031 aa18.87■□□□□ 0.61
SNRNP70-203ENST00000544278 FKBP4Q02790 459 aaKnown RBP eCLIP18.87■□□□□ 0.613e-10■□□□□ 9.7
SNRNP70-203ENST00000544278 CAMK4Q16566 473 aa18.87■□□□□ 0.61
SNRNP70-203ENST00000544278 INTS4Q96HW7 963 aaKnown RBP18.87■□□□□ 0.61
SNRNP70-203ENST00000544278 FGD1P98174 961 aa18.86■□□□□ 0.61
SNRNP70-203ENST00000544278 CHMP4AQ9BY43 222 aa18.86■□□□□ 0.61
SNRNP70-203ENST00000544278 SLIT3O75094 1523 aa18.86■□□□□ 0.61
SNRNP70-203ENST00000544278 BLOC1S2Q6QNY1 142 aa18.86■□□□□ 0.61
SNRNP70-203ENST00000544278 LMO7Q8WWI1 1683 aa18.86■□□□□ 0.61
SNRNP70-203ENST00000544278 PTMSP20962 102 aa18.85■□□□□ 0.61
SNRNP70-203ENST00000544278 HCLS1P14317 486 aaPredicted RBP18.85■□□□□ 0.61
SNRNP70-203ENST00000544278 LARP1BQ659C4 914 aaKnown RBP18.85■□□□□ 0.61
SNRNP70-203ENST00000544278 LRSAM1Q6UWE0 723 aa18.85■□□□□ 0.61
SNRNP70-203ENST00000544278 MAP4K1Q92918 833 aa18.85■□□□□ 0.61
SNRNP70-203ENST00000544278 F13A1P00488 732 aa18.85■□□□□ 0.61
SNRNP70-203ENST00000544278 HAND2P61296 217 aa18.85■□□□□ 0.61
SNRNP70-203ENST00000544278 TTLL5Q6EMB2 1281 aa18.85■□□□□ 0.61
SNRNP70-203ENST00000544278 DNAJC10Q8IXB1 793 aa18.85■□□□□ 0.61
SNRNP70-203ENST00000544278 TUBGCP6Q96RT7 1819 aa18.85■□□□□ 0.61
SNRNP70-203ENST00000544278 ZSWIM6Q9HCJ5 1215 aa18.84■□□□□ 0.61
SNRNP70-203ENST00000544278 C5P01031 1676 aa18.84■□□□□ 0.61
SNRNP70-203ENST00000544278 GUCY1B3Q02153 619 aa18.84■□□□□ 0.61
SNRNP70-203ENST00000544278 MTMR6Q9Y217 621 aa18.84■□□□□ 0.61
SNRNP70-203ENST00000544278 NCAPD2Q15021 1401 aa18.84■□□□□ 0.61
SNRNP70-203ENST00000544278 SNAP23O00161 211 aa18.83■□□□□ 0.61
SNRNP70-203ENST00000544278 ADORA1P30542 326 aa18.83■□□□□ 0.61
SNRNP70-203ENST00000544278 CCT2P78371 535 aaKnown RBP18.83■□□□□ 0.61
SNRNP70-203ENST00000544278 GPHNQ9NQX3 736 aaPredicted RBP18.83■□□□□ 0.61
SNRNP70-203ENST00000544278 USP42Q9H9J4 1324 aaKnown RBP18.83■□□□□ 0.61
SNRNP70-203ENST00000544278 TAF5LO75529 589 aa18.83■□□□□ 0.61
SNRNP70-203ENST00000544278 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.83■□□□□ 0.6
SNRNP70-203ENST00000544278 PLBD2Q8NHP8 589 aa18.82■□□□□ 0.6
SNRNP70-203ENST00000544278 SLAIN2Q9P270 581 aa18.82■□□□□ 0.6
SNRNP70-203ENST00000544278 USP25Q9UHP3 1055 aa18.82■□□□□ 0.6
SNRNP70-203ENST00000544278 FOXO4P98177 505 aa18.82■□□□□ 0.6
SNRNP70-203ENST00000544278 NCOA5Q9HCD5 579 aaKnown RBP18.82■□□□□ 0.6
SNRNP70-203ENST00000544278 UTYO14607 1347 aa18.82■□□□□ 0.6
SNRNP70-203ENST00000544278 CCDC173Q0VFZ6 552 aa18.81■□□□□ 0.6
SNRNP70-203ENST00000544278 TOB2Q14106 344 aaPredicted RBP18.81■□□□□ 0.6
SNRNP70-203ENST00000544278 BRF1Q92994 677 aa18.81■□□□□ 0.6
SNRNP70-203ENST00000544278 FAM13BQ9NYF5 915 aa18.81■□□□□ 0.6
SNRNP70-203ENST00000544278 ADAMTSL3P82987 1691 aa18.81■□□□□ 0.6
SNRNP70-203ENST00000544278 PTMAP06454 111 aaKnown RBP18.81■□□□□ 0.6
SNRNP70-203ENST00000544278 CYP21A2P08686 494 aa18.81■□□□□ 0.6
SNRNP70-203ENST00000544278 COPRSQ9NQ92 184 aa18.81■□□□□ 0.6
SNRNP70-203ENST00000544278 C17orf53Q8N3J3 647 aaPredicted RBP18.81■□□□□ 0.6
SNRNP70-203ENST00000544278 FTOQ9C0B1 505 aaKnown RBP eCLIP18.81■□□□□ 0.69e-16■□□□□ 8.5
SNRNP70-203ENST00000544278 CWC25Q9NXE8 425 aaPredicted RBP18.81■□□□□ 0.6
SNRNP70-203ENST00000544278 A0A087WWV3 80 aa18.8■□□□□ 0.6
SNRNP70-203ENST00000544278 ATG9AQ7Z3C6 839 aa18.8■□□□□ 0.6
SNRNP70-203ENST00000544278 TSPY26PQ9H489 355 aa18.8■□□□□ 0.6
SNRNP70-203ENST00000544278 TNS3Q68CZ2 1445 aa18.8■□□□□ 0.6
SNRNP70-203ENST00000544278 GORABQ5T7V8 394 aa18.8■□□□□ 0.6
SNRNP70-203ENST00000544278 Q6ZUG5 572 aa18.8■□□□□ 0.6
SNRNP70-203ENST00000544278 STOX1Q6ZVD7 989 aa18.8■□□□□ 0.6
SNRNP70-203ENST00000544278 STK11IPQ8N1F8 1099 aa18.8■□□□□ 0.6
SNRNP70-203ENST00000544278 HELBQ8NG08 1087 aaPredicted RBP18.8■□□□□ 0.6
SNRNP70-203ENST00000544278 HDAC5Q9UQL6 1122 aa18.8■□□□□ 0.6
SNRNP70-203ENST00000544278 TRPM3Q9HCF6 1732 aaPredicted RBP18.8■□□□□ 0.6
SNRNP70-203ENST00000544278 ZNF609O15014 1411 aa18.8■□□□□ 0.6
SNRNP70-203ENST00000544278 CASP7P55210 303 aa18.79■□□□□ 0.6
SNRNP70-203ENST00000544278 CKAP2LQ8IYA6 745 aa18.79■□□□□ 0.6
SNRNP70-203ENST00000544278 MBD3O95983 291 aa18.79■□□□□ 0.6
SNRNP70-203ENST00000544278 IL2RBP14784 551 aa18.79■□□□□ 0.6
SNRNP70-203ENST00000544278 SCARF1Q14162 830 aa18.79■□□□□ 0.6
SNRNP70-203ENST00000544278 FBXW7Q969H0 707 aa18.79■□□□□ 0.6
SNRNP70-203ENST00000544278 AEBP2Q6ZN18 517 aaPredicted RBP18.79■□□□□ 0.6
SNRNP70-203ENST00000544278 BTG4Q9NY30 223 aa18.79■□□□□ 0.6
SNRNP70-203ENST00000544278 TBC1D2BQ9UPU7 963 aa18.79■□□□□ 0.6
SNRNP70-203ENST00000544278 A0A1B0GUL7 405 aa18.78■□□□□ 0.6
SNRNP70-203ENST00000544278 HLFQ16534 295 aa18.78■□□□□ 0.6
SNRNP70-203ENST00000544278 MSNP26038 577 aaKnown RBP18.78■□□□□ 0.6
SNRNP70-203ENST00000544278 APOBRQ0VD83 1088 aa18.78■□□□□ 0.6
SNRNP70-203ENST00000544278 WASHC4Q2M389 1173 aa18.78■□□□□ 0.6
SNRNP70-203ENST00000544278 TAF7LQ5H9L4 462 aa18.78■□□□□ 0.6
SNRNP70-203ENST00000544278 WDR17Q8IZU2 1322 aa18.78■□□□□ 0.6
SNRNP70-203ENST00000544278 RPS6KB1P23443 525 aa18.78■□□□□ 0.6
SNRNP70-203ENST00000544278 TTC6Q86TZ1 520 aa18.78■□□□□ 0.6
SNRNP70-203ENST00000544278 STRCP1A6NGW2 1772 aa18.77■□□□□ 0.6
SNRNP70-203ENST00000544278 IFIT1P09914 478 aaKnown RBP18.77■□□□□ 0.59
SNRNP70-203ENST00000544278 LIG1P18858 919 aa18.77■□□□□ 0.59
SNRNP70-203ENST00000544278 ATP5JP18859 108 aa18.77■□□□□ 0.59
SNRNP70-203ENST00000544278 TMOD3Q9NYL9 352 aa18.77■□□□□ 0.59
SNRNP70-203ENST00000544278 ISY1Q9ULR0 285 aaKnown RBP18.77■□□□□ 0.59
SNRNP70-203ENST00000544278 USP54Q70EL1 1684 aa18.77■□□□□ 0.59
SNRNP70-203ENST00000544278 CAMTA1Q9Y6Y1 1673 aa18.77■□□□□ 0.59
SNRNP70-203ENST00000544278 OTUD7BQ6GQQ9 843 aa18.76■□□□□ 0.59
SNRNP70-203ENST00000544278 SMIM5Q71RC9 77 aa18.76■□□□□ 0.59
SNRNP70-203ENST00000544278 DENND2AQ9ULE3 1009 aa18.76■□□□□ 0.59
SNRNP70-203ENST00000544278 PIGBQ92521 554 aa18.76■□□□□ 0.59
SNRNP70-203ENST00000544278 NEK1Q96PY6 1258 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms