RNA–Protein interactions for RNA: ENST00000544231.1

SSPN-208, Transcript of sarcospan, humanhuman

TSL 4

Gene SSPN, Length 572 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-208ENST00000544231 RTL9Q8NET4 1388 aa18.3■□□□□ 0.52
SSPN-208ENST00000544231 ANKRD31Q8N7Z5 1873 aa18.29■□□□□ 0.52
SSPN-208ENST00000544231 CSF1RP07333 972 aa18.29■□□□□ 0.52
SSPN-208ENST00000544231 SRGNP10124 158 aa18.29■□□□□ 0.52
SSPN-208ENST00000544231 FOXO4P98177 505 aa18.29■□□□□ 0.52
SSPN-208ENST00000544231 RABL6Q3YEC7 729 aaPredicted RBP18.29■□□□□ 0.52
SSPN-208ENST00000544231 STYK1Q6J9G0 422 aa18.29■□□□□ 0.52
SSPN-208ENST00000544231 LMBR1LQ6UX01 489 aa18.29■□□□□ 0.52
SSPN-208ENST00000544231 FHDC1Q9C0D6 1143 aaPredicted RBP18.29■□□□□ 0.52
SSPN-208ENST00000544231 TNRC6CQ9HCJ0 1690 aaKnown RBP18.28■□□□□ 0.52
SSPN-208ENST00000544231 MYH3P11055 1940 aa18.28■□□□□ 0.52
SSPN-208ENST00000544231 ALDH1B1P30837 517 aa18.28■□□□□ 0.52
SSPN-208ENST00000544231 HOXA10P31260 410 aaPredicted RBP18.28■□□□□ 0.52
SSPN-208ENST00000544231 C3orf67Q6ZVT6 689 aa18.28■□□□□ 0.52
SSPN-208ENST00000544231 CNKSR1Q969H4 720 aa18.28■□□□□ 0.52
SSPN-208ENST00000544231 ZNF622Q969S3 477 aaKnown RBP eCLIP18.28■□□□□ 0.52
SSPN-208ENST00000544231 KAZALD1Q96I82 304 aa18.28■□□□□ 0.52
SSPN-208ENST00000544231 DPEP1P16444 411 aa18.27■□□□□ 0.52
SSPN-208ENST00000544231 CHRNA5P30532 468 aa18.27■□□□□ 0.52
SSPN-208ENST00000544231 IFIT5Q13325 482 aaKnown RBP18.27■□□□□ 0.52
SSPN-208ENST00000544231 CCDC57Q2TAC2 916 aa18.27■□□□□ 0.52
SSPN-208ENST00000544231 EPHA10Q5JZY3 1008 aa18.27■□□□□ 0.52
SSPN-208ENST00000544231 ANKRD44Q8N8A2 993 aa18.27■□□□□ 0.52
SSPN-208ENST00000544231 CRAMP1Q96RY5 1269 aa18.27■□□□□ 0.52
SSPN-208ENST00000544231 CDC5LQ99459 802 aaKnown RBP18.27■□□□□ 0.52
SSPN-208ENST00000544231 A0A0G2JLW4 131 aa18.26■□□□□ 0.51
SSPN-208ENST00000544231 ANKRD18BA2A2Z9 1011 aa18.26■□□□□ 0.51
SSPN-208ENST00000544231 FAM161AQ3B820 660 aa18.26■□□□□ 0.51
SSPN-208ENST00000544231 CCDC85AQ96PX6 553 aaPredicted RBP18.26■□□□□ 0.51
SSPN-208ENST00000544231 SYT17Q9BSW7 474 aa18.26■□□□□ 0.51
SSPN-208ENST00000544231 GREM2Q9H772 168 aa18.26■□□□□ 0.51
SSPN-208ENST00000544231 C1orf115Q9H7X2 142 aa18.26■□□□□ 0.51
SSPN-208ENST00000544231 PIM2Q9P1W9 311 aa18.26■□□□□ 0.51
SSPN-208ENST00000544231 ITGA6P23229 1130 aa18.25■□□□□ 0.51
SSPN-208ENST00000544231 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
SSPN-208ENST00000544231 MTX1Q13505 466 aa18.25■□□□□ 0.51
SSPN-208ENST00000544231 GRAPQ13588 217 aa18.25■□□□□ 0.51
SSPN-208ENST00000544231 TAF7LQ5H9L4 462 aa18.25■□□□□ 0.51
SSPN-208ENST00000544231 RPAP2Q8IXW5 612 aaPredicted RBP18.25■□□□□ 0.51
SSPN-208ENST00000544231 GRAPLQ8TC17 118 aaPredicted RBP18.25■□□□□ 0.51
SSPN-208ENST00000544231 BBOX1O75936 387 aa18.24■□□□□ 0.51
SSPN-208ENST00000544231 TMC4Q7Z404 712 aa18.24■□□□□ 0.51
SSPN-208ENST00000544231 ANKRD18AQ8IVF6 992 aa18.24■□□□□ 0.51
SSPN-208ENST00000544231 TTLL6Q8N841 843 aa18.24■□□□□ 0.51
SSPN-208ENST00000544231 COL11A2P13942 1736 aaPredicted RBP18.23■□□□□ 0.51
SSPN-208ENST00000544231 SRGAP3O43295 1099 aa18.23■□□□□ 0.51
SSPN-208ENST00000544231 HMMRO75330 724 aa18.23■□□□□ 0.51
SSPN-208ENST00000544231 IGHMBP2P38935 993 aaKnown RBP18.23■□□□□ 0.51
SSPN-208ENST00000544231 NLGN2Q8NFZ4 835 aa18.23■□□□□ 0.51
SSPN-208ENST00000544231 EXOC6Q8TAG9 804 aa18.23■□□□□ 0.51
SSPN-208ENST00000544231 TMX4Q9H1E5 349 aaPredicted RBP18.23■□□□□ 0.51
SSPN-208ENST00000544231 RPS8P62241 208 aaKnown RBP18.22■□□□□ 0.51
SSPN-208ENST00000544231 ATP8B2P98198 1209 aa18.22■□□□□ 0.51
SSPN-208ENST00000544231 DALRD3Q5D0E6 543 aaKnown RBP18.22■□□□□ 0.51
SSPN-208ENST00000544231 CEP85Q6P2H3 762 aa18.22■□□□□ 0.51
SSPN-208ENST00000544231 SEC31BQ9NQW1 1179 aa18.22■□□□□ 0.51
SSPN-208ENST00000544231 DLEC1Q9Y238 1755 aa18.22■□□□□ 0.51
SSPN-208ENST00000544231 KCNA3P22001 575 aa18.21■□□□□ 0.51
SSPN-208ENST00000544231 MPHOSPH8Q99549 860 aa18.21■□□□□ 0.51
SSPN-208ENST00000544231 PPEF1O14829 653 aaPredicted RBP18.2■□□□□ 0.5
SSPN-208ENST00000544231 PRPF40BQ6NWY9 871 aaKnown RBP18.2■□□□□ 0.5
SSPN-208ENST00000544231 CELF1Q92879 486 aaKnown RBP18.2■□□□□ 0.5
SSPN-208ENST00000544231 KIAA1551Q9HCM1 1747 aa18.2■□□□□ 0.5
SSPN-208ENST00000544231 SOGA3Q5TF21 947 aa18.19■□□□□ 0.5
SSPN-208ENST00000544231 SSH3Q8TE77 659 aa18.19■□□□□ 0.5
SSPN-208ENST00000544231 FBXO3Q9UK99 471 aa18.19■□□□□ 0.5
SSPN-208ENST00000544231 SRCAPQ6ZRS2 3230 aa18.19■□□□□ 0.5
SSPN-208ENST00000544231 PNMA6EA0A0J9YXQ4 647 aa18.18■□□□□ 0.5
SSPN-208ENST00000544231 CC2D2BQ6DHV5 1058 aa18.18■□□□□ 0.5
SSPN-208ENST00000544231 LDHAL6AQ6ZMR3 332 aa18.18■□□□□ 0.5
SSPN-208ENST00000544231 COPRSQ9NQ92 184 aa18.18■□□□□ 0.5
SSPN-208ENST00000544231 BSDC1Q9NW68 430 aaPredicted RBP18.18■□□□□ 0.5
SSPN-208ENST00000544231 RFX5P48382 616 aaPredicted RBP18.17■□□□□ 0.5
SSPN-208ENST00000544231 POLA2Q14181 598 aa18.17■□□□□ 0.5
SSPN-208ENST00000544231 GRIPAP1Q4V328 841 aa18.17■□□□□ 0.5
SSPN-208ENST00000544231 CNNM1Q9NRU3 951 aa18.17■□□□□ 0.5
SSPN-208ENST00000544231 BCS1LQ9Y276 419 aa18.17■□□□□ 0.5
SSPN-208ENST00000544231 ATP6V0A2Q9Y487 856 aa18.17■□□□□ 0.5
SSPN-208ENST00000544231 PTPN12Q05209 780 aaKnown RBP18.16■□□□□ 0.5
SSPN-208ENST00000544231 ERICH6BQ5W0A0 696 aa18.16■□□□□ 0.5
SSPN-208ENST00000544231 SP8Q8IXZ3 490 aa18.16■□□□□ 0.5
SSPN-208ENST00000544231 ZNF594Q96JF6 807 aaPredicted RBP18.16■□□□□ 0.5
SSPN-208ENST00000544231 EYA2O00167 538 aa18.15■□□□□ 0.5
SSPN-208ENST00000544231 CIAO1O76071 339 aa18.15■□□□□ 0.5
SSPN-208ENST00000544231 HSP90AB4PQ58FF6 505 aa18.15■□□□□ 0.5
SSPN-208ENST00000544231 PCDHB15Q9Y5E8 787 aa18.15■□□□□ 0.5
SSPN-208ENST00000544231 BRCA1P38398 1863 aaKnown RBP18.15■□□□□ 0.5
SSPN-208ENST00000544231 G3BP1Q13283 466 aaKnown RBP eCLIP18.14■□□□□ 0.49
SSPN-208ENST00000544231 OS9Q13438 667 aaPredicted RBP18.14■□□□□ 0.49
SSPN-208ENST00000544231 CCDC93Q567U6 631 aa18.14■□□□□ 0.49
SSPN-208ENST00000544231 ANKRD2Q9GZV1 360 aa18.14■□□□□ 0.49
SSPN-208ENST00000544231 WWC3Q9ULE0 1092 aa18.14■□□□□ 0.49
SSPN-208ENST00000544231 MROH5Q6ZUA9 1318 aa18.14■□□□□ 0.49
SSPN-208ENST00000544231 C21orf2O43822 256 aa18.13■□□□□ 0.49
SSPN-208ENST00000544231 SURF6O75683 361 aaKnown RBP18.13■□□□□ 0.49
SSPN-208ENST00000544231 IL15P40933 162 aaPredicted RBP18.13■□□□□ 0.49
SSPN-208ENST00000544231 SIRT2Q8IXJ6 389 aa18.13■□□□□ 0.49
SSPN-208ENST00000544231 RTKN2Q8IZC4 609 aa18.13■□□□□ 0.49
SSPN-208ENST00000544231 PELP1Q8IZL8 1130 aaKnown RBP18.13■□□□□ 0.49
SSPN-208ENST00000544231 KLHDC4Q8TBB5 520 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms