RNA–Protein interactions for RNA: ENST00000544128.5

SP140-214, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 910 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-214ENST00000544128 UBN2Q6ZU65 1347 aa11.91□□□□□ -0.5
SP140-214ENST00000544128 SLC34A2O95436 690 aa11.91□□□□□ -0.5
SP140-214ENST00000544128 NBPF7P0C2Y1 421 aaPredicted RBP11.91□□□□□ -0.5
SP140-214ENST00000544128 UBTFL1P0CB47 393 aaPredicted RBP11.91□□□□□ -0.5
SP140-214ENST00000544128 YBX3P16989 372 aaKnown RBP eCLIP11.91□□□□□ -0.5
SP140-214ENST00000544128 PRELPP51888 382 aa11.91□□□□□ -0.5
SP140-214ENST00000544128 PARP10Q53GL7 1025 aa11.91□□□□□ -0.5
SP140-214ENST00000544128 RTL5Q5HYW3 569 aaPredicted RBP11.91□□□□□ -0.5
SP140-214ENST00000544128 SUSD4Q5VX71 490 aa11.91□□□□□ -0.5
SP140-214ENST00000544128 DNAJC5GQ8N7S2 189 aa11.91□□□□□ -0.5
SP140-214ENST00000544128 NLGN2Q8NFZ4 835 aa11.91□□□□□ -0.5
SP140-214ENST00000544128 SETDB2Q96T68 719 aa11.91□□□□□ -0.5
SP140-214ENST00000544128 C1orf115Q9H7X2 142 aa11.91□□□□□ -0.5
SP140-214ENST00000544128 TRMT112Q9UI30 125 aaKnown RBP11.91□□□□□ -0.5
SP140-214ENST00000544128 QSER1Q2KHR3 1735 aa11.91□□□□□ -0.5
SP140-214ENST00000544128 H7C1W4 665 aa11.9□□□□□ -0.5
SP140-214ENST00000544128 GNAI2P04899 355 aa11.9□□□□□ -0.5
SP140-214ENST00000544128 PCCAP05165 728 aaPredicted RBP11.9□□□□□ -0.5
SP140-214ENST00000544128 AAMPQ13685 434 aa11.9□□□□□ -0.5
SP140-214ENST00000544128 NFIXQ14938 502 aa11.9□□□□□ -0.5
SP140-214ENST00000544128 UBE3BQ7Z3V4 1068 aa11.9□□□□□ -0.5
SP140-214ENST00000544128 UTP14AQ9BVJ6 771 aaKnown RBP11.9□□□□□ -0.5
SP140-214ENST00000544128 STK24Q9Y6E0 443 aa11.9□□□□□ -0.5
SP140-214ENST00000544128 IBTKQ9P2D0 1353 aaPredicted RBP11.9□□□□□ -0.5
SP140-214ENST00000544128 UTYO14607 1347 aa11.89□□□□□ -0.51
SP140-214ENST00000544128 CHRM1P11229 460 aaPredicted RBP11.89□□□□□ -0.51
SP140-214ENST00000544128 MSL1Q68DK7 614 aa11.89□□□□□ -0.51
SP140-214ENST00000544128 PPP1R42Q7Z4L9 355 aa11.89□□□□□ -0.51
SP140-214ENST00000544128 SYNE4Q8N205 404 aa11.89□□□□□ -0.51
SP140-214ENST00000544128 NLGN1Q8N2Q7 840 aa11.89□□□□□ -0.51
SP140-214ENST00000544128 ZBTB38Q8NAP3 1195 aaPredicted RBP11.89□□□□□ -0.51
SP140-214ENST00000544128 FAM89AQ96GI7 184 aa11.89□□□□□ -0.51
SP140-214ENST00000544128 SUCLG2Q96I99 432 aa11.89□□□□□ -0.51
SP140-214ENST00000544128 LRRFIP2Q9Y608 721 aaKnown RBP11.89□□□□□ -0.51
SP140-214ENST00000544128 GRIN3BO60391 1043 aa11.88□□□□□ -0.51
SP140-214ENST00000544128 NTSR2O95665 410 aa11.88□□□□□ -0.51
SP140-214ENST00000544128 TM4SF1P30408 202 aa11.88□□□□□ -0.51
SP140-214ENST00000544128 CASP7P55210 303 aa11.88□□□□□ -0.51
SP140-214ENST00000544128 TNS4Q8IZW8 715 aa11.88□□□□□ -0.51
SP140-214ENST00000544128 PPP4R2Q9NY27 417 aa11.88□□□□□ -0.51
SP140-214ENST00000544128 HDAC5Q9UQL6 1122 aa11.88□□□□□ -0.51
SP140-214ENST00000544128 PCDHB15Q9Y5E8 787 aa11.88□□□□□ -0.51
SP140-214ENST00000544128 GTF2E1P29083 439 aaPredicted RBP11.87□□□□□ -0.51
SP140-214ENST00000544128 APLP1P51693 650 aa11.87□□□□□ -0.51
SP140-214ENST00000544128 NBPF5PQ86XG9 351 aaPredicted RBP11.87□□□□□ -0.51
SP140-214ENST00000544128 NUTM1Q86Y26 1132 aa11.87□□□□□ -0.51
SP140-214ENST00000544128 NYXQ9GZU5 481 aa11.87□□□□□ -0.51
SP140-214ENST00000544128 CARMIL3Q8ND23 1372 aa11.87□□□□□ -0.51
SP140-214ENST00000544128 SH3TC1Q8TE82 1336 aa11.86□□□□□ -0.51
SP140-214ENST00000544128 COL24A1Q17RW2 1714 aa11.86□□□□□ -0.51
SP140-214ENST00000544128 IRS4O14654 1257 aaPredicted RBP11.86□□□□□ -0.51
SP140-214ENST00000544128 NPHP1O15259 732 aa11.86□□□□□ -0.51
SP140-214ENST00000544128 SERPINB2P05120 415 aa11.86□□□□□ -0.51
SP140-214ENST00000544128 DDR1Q08345 913 aa11.86□□□□□ -0.51
SP140-214ENST00000544128 ERFEQ4G0M1 354 aa11.86□□□□□ -0.51
SP140-214ENST00000544128 TPTE2Q6XPS3 522 aa11.86□□□□□ -0.51
SP140-214ENST00000544128 HOMEZQ8IX15 550 aa11.86□□□□□ -0.51
SP140-214ENST00000544128 KAZALD1Q96I82 304 aa11.86□□□□□ -0.51
SP140-214ENST00000544128 BICC1Q9H694 974 aaKnown RBP11.86□□□□□ -0.51
SP140-214ENST00000544128 CDHR2Q9BYE9 1310 aa11.86□□□□□ -0.51
SP140-214ENST00000544128 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.85□□□□□ -0.51
SP140-214ENST00000544128 POLRMTO00411 1230 aaKnown RBP11.85□□□□□ -0.51
SP140-214ENST00000544128 MMP10P09238 476 aa11.85□□□□□ -0.51
SP140-214ENST00000544128 HCLS1P14317 486 aaPredicted RBP11.85□□□□□ -0.51
SP140-214ENST00000544128 FOXO4P98177 505 aa11.85□□□□□ -0.51
SP140-214ENST00000544128 ATP8B2P98198 1209 aa11.85□□□□□ -0.51
SP140-214ENST00000544128 EPHA10Q5JZY3 1008 aa11.85□□□□□ -0.51
SP140-214ENST00000544128 CEP85Q6P2H3 762 aa11.85□□□□□ -0.51
SP140-214ENST00000544128 RPAP2Q8IXW5 612 aaPredicted RBP11.85□□□□□ -0.51
SP140-214ENST00000544128 CCDC24Q8N4L8 307 aa11.85□□□□□ -0.51
SP140-214ENST00000544128 ANKRD44Q8N8A2 993 aa11.85□□□□□ -0.51
SP140-214ENST00000544128 SLC16A10Q8TF71 515 aa11.85□□□□□ -0.51
SP140-214ENST00000544128 CCDC136Q96JN2 1154 aa11.85□□□□□ -0.51
SP140-214ENST00000544128 ZFP91Q96JP5 570 aaPredicted RBP11.85□□□□□ -0.51
SP140-214ENST00000544128 PARP3Q9Y6F1 533 aa11.85□□□□□ -0.51
SP140-214ENST00000544128 POLD1P28340 1107 aa11.84□□□□□ -0.51
SP140-214ENST00000544128 B4GALNT3Q6L9W6 998 aa11.84□□□□□ -0.51
SP140-214ENST00000544128 LMBR1LQ6UX01 489 aa11.84□□□□□ -0.51
SP140-214ENST00000544128 SIRT2Q8IXJ6 389 aa11.84□□□□□ -0.51
SP140-214ENST00000544128 CNBD1Q8NA66 436 aa11.84□□□□□ -0.51
SP140-214ENST00000544128 PLA2G12BQ9BX93 195 aa11.84□□□□□ -0.51
SP140-214ENST00000544128 KIF3CO14782 793 aa11.83□□□□□ -0.52
SP140-214ENST00000544128 PDE8AO60658 829 aa11.83□□□□□ -0.52
SP140-214ENST00000544128 IGHDP01880 384 aa11.83□□□□□ -0.52
SP140-214ENST00000544128 HSP90B1P14625 803 aaKnown RBP11.83□□□□□ -0.52
SP140-214ENST00000544128 SLC10A5Q5PT55 438 aa11.83□□□□□ -0.52
SP140-214ENST00000544128 PRR5LQ6MZQ0 368 aa11.83□□□□□ -0.52
SP140-214ENST00000544128 RWDD1Q9H446 243 aaPredicted RBP11.83□□□□□ -0.52
SP140-214ENST00000544128 WDR70Q9NW82 654 aa11.83□□□□□ -0.52
SP140-214ENST00000544128 CHMP3Q9Y3E7 222 aa11.83□□□□□ -0.52
SP140-214ENST00000544128 ABCC12Q96J65 1359 aa11.82□□□□□ -0.52
SP140-214ENST00000544128 PNMA6EA0A0J9YXQ4 647 aa11.82□□□□□ -0.52
SP140-214ENST00000544128 SRGAP3O43295 1099 aa11.82□□□□□ -0.52
SP140-214ENST00000544128 ST5P78524 1137 aa11.82□□□□□ -0.52
SP140-214ENST00000544128 RABL6Q3YEC7 729 aaPredicted RBP11.82□□□□□ -0.52
SP140-214ENST00000544128 CCDC85AQ96PX6 553 aaPredicted RBP11.82□□□□□ -0.52
SP140-214ENST00000544128 DDX60Q8IY21 1712 aaKnown RBP11.82□□□□□ -0.52
SP140-214ENST00000544128 WDR90Q96KV7 1748 aa11.81□□□□□ -0.52
SP140-214ENST00000544128 HMMRO75330 724 aa11.81□□□□□ -0.52
SP140-214ENST00000544128 CSF1RP07333 972 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms