RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 CYP4F22Q6NT55 531 aa6.71□□□□□ -1.34
NPIPB4-219ENST00000543660 PNMA8AQ86V59 439 aaPredicted RBP6.71□□□□□ -1.34
NPIPB4-219ENST00000543660 C7orf43Q8WVR3 580 aa6.71□□□□□ -1.34
NPIPB4-219ENST00000543660 ZDHHC16Q969W1 377 aa6.71□□□□□ -1.34
NPIPB4-219ENST00000543660 DDX21Q9NR30 783 aaKnown RBP eCLIP6.71□□□□□ -1.34
NPIPB4-219ENST00000543660 POLKQ9UBT6 870 aa6.71□□□□□ -1.34
NPIPB4-219ENST00000543660 HACL1Q9UJ83 578 aa6.71□□□□□ -1.34
NPIPB4-219ENST00000543660 PDZRN3Q9UPQ7 1066 aa6.71□□□□□ -1.34
NPIPB4-219ENST00000543660 ZNF541Q9H0D2 1346 aa6.71□□□□□ -1.34
NPIPB4-219ENST00000543660 COL15A1P39059 1388 aa6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 ANKRD26Q9UPS8 1709 aa6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 CASP8AP2Q9UKL3 1982 aa6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 HMGB1P09429 215 aaKnown RBP6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 PDE6BP35913 854 aa6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 MAP2K2P36507 400 aa6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 ECE1P42892 770 aa6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 MTHFSP49914 203 aa6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 PLEKHO1Q53GL0 409 aaPredicted RBP6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 PRPF38BQ5VTL8 546 aaKnown RBP6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 CST9Q5W186 159 aa6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 PRR5LQ6MZQ0 368 aa6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 ZNF530Q6P9A1 599 aaPredicted RBP6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 NYAP1Q6ZVC0 841 aa6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 CCDC24Q8N4L8 307 aa6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 ZC3H15Q8WU90 426 aaKnown RBP6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 CRISPLD2Q9H0B8 497 aa6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 ZBTB1Q9Y2K1 713 aa6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 ANKRD31Q8N7Z5 1873 aa6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 RNF123Q5XPI4 1314 aa6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 LTBP1Q14766 1721 aa6.7□□□□□ -1.34
NPIPB4-219ENST00000543660 SLX4Q8IY92 1834 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 KIF20BQ96Q89 1820 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 CA12O43570 354 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 AOC2O75106 756 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 SRGNP10124 158 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 GRM1Q13255 1194 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 DGKZQ13574 1117 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 AMOTQ4VCS5 1084 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 PPP1R15BQ5SWA1 713 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 SOGA3Q5TF21 947 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 TBC1D9BQ66K14 1250 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 STYK1Q6J9G0 422 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 PRPF40BQ6NWY9 871 aaKnown RBP6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 Q6ZNB5 142 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 BICDL1Q6ZP65 573 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 ANKK1Q8NFD2 765 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 KCNV2Q8TDN2 545 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 CNKSR1Q969H4 720 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 SLC24A3Q9HC58 644 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 RABGEF1Q9UJ41 708 aa6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 COL11A2P13942 1736 aaPredicted RBP6.69□□□□□ -1.34
NPIPB4-219ENST00000543660 FZD9O00144 591 aa6.68□□□□□ -1.34
NPIPB4-219ENST00000543660 EIF5P55010 431 aaKnown RBP6.68□□□□□ -1.34
NPIPB4-219ENST00000543660 LAPTM4AQ15012 233 aa6.68□□□□□ -1.34
NPIPB4-219ENST00000543660 ADAM33Q9BZ11 813 aa6.68□□□□□ -1.34
NPIPB4-219ENST00000543660 ZNF277Q9NRM2 450 aaPredicted RBP6.68□□□□□ -1.34
NPIPB4-219ENST00000543660 TLL2Q9Y6L7 1015 aa6.68□□□□□ -1.34
NPIPB4-219ENST00000543660 TRAF5O00463 557 aa6.67□□□□□ -1.34
NPIPB4-219ENST00000543660 CANXP27824 592 aaKnown RBP6.67□□□□□ -1.34
NPIPB4-219ENST00000543660 SOX10P56693 466 aa6.67□□□□□ -1.34
NPIPB4-219ENST00000543660 FKBP4Q02790 459 aaKnown RBP eCLIP6.67□□□□□ -1.34
NPIPB4-219ENST00000543660 SLC39A6Q13433 755 aa6.67□□□□□ -1.34
NPIPB4-219ENST00000543660 CCDC93Q567U6 631 aa6.67□□□□□ -1.34
NPIPB4-219ENST00000543660 C1orf141Q5JVX7 400 aa6.67□□□□□ -1.34
NPIPB4-219ENST00000543660 SAPCD2Q86UD0 394 aa6.67□□□□□ -1.34
NPIPB4-219ENST00000543660 LAPTM4BQ86VI4 370 aa6.67□□□□□ -1.34
NPIPB4-219ENST00000543660 GPC2Q8N158 579 aa6.67□□□□□ -1.34
NPIPB4-219ENST00000543660 MASTLQ96GX5 879 aa6.67□□□□□ -1.34
NPIPB4-219ENST00000543660 PPP1R3GB7ZBB8 358 aa6.66□□□□□ -1.34
NPIPB4-219ENST00000543660 EVI5O60447 810 aa6.66□□□□□ -1.34
NPIPB4-219ENST00000543660 OLFM4Q6UX06 510 aa6.66□□□□□ -1.34
NPIPB4-219ENST00000543660 AEBP1Q8IUX7 1158 aa6.66□□□□□ -1.34
NPIPB4-219ENST00000543660 SLC52A2Q9HAB3 445 aa6.66□□□□□ -1.34
NPIPB4-219ENST00000543660 MKI67P46013 3256 aaKnown RBP6.65□□□□□ -1.34
NPIPB4-219ENST00000543660 CACNA1SQ13698 1873 aa6.65□□□□□ -1.34
NPIPB4-219ENST00000543660 A0A087WZG4 1122 aa6.65□□□□□ -1.34
NPIPB4-219ENST00000543660 KLRG2A4D1S0 409 aaPredicted RBP6.65□□□□□ -1.34
NPIPB4-219ENST00000543660 PDE4AP27815 886 aa6.65□□□□□ -1.34
NPIPB4-219ENST00000543660 IARSP41252 1262 aaKnown RBP6.65□□□□□ -1.34
NPIPB4-219ENST00000543660 EPS15P42566 896 aa6.65□□□□□ -1.34
NPIPB4-219ENST00000543660 SCNN1DP51172 638 aa6.65□□□□□ -1.34
NPIPB4-219ENST00000543660 CIAPIN1Q6FI81 312 aa6.65□□□□□ -1.34
NPIPB4-219ENST00000543660 CNBD1Q8NA66 436 aa6.65□□□□□ -1.34
NPIPB4-219ENST00000543660 HHIPL1Q96JK4 782 aa6.65□□□□□ -1.34
NPIPB4-219ENST00000543660 ZIC5Q96T25 663 aa6.65□□□□□ -1.34
NPIPB4-219ENST00000543660 LGR6Q9HBX8 967 aa6.65□□□□□ -1.34
NPIPB4-219ENST00000543660 ARFGEF2Q9Y6D5 1785 aa6.64□□□□□ -1.35
NPIPB4-219ENST00000543660 SOWAHBA6NEL2 793 aa6.64□□□□□ -1.35
NPIPB4-219ENST00000543660 TNNT2P45379 298 aaPredicted RBP6.64□□□□□ -1.35
NPIPB4-219ENST00000543660 AKAP4Q5JQC9 854 aa6.64□□□□□ -1.35
NPIPB4-219ENST00000543660 USP50Q70EL3 339 aaPredicted RBP6.64□□□□□ -1.35
NPIPB4-219ENST00000543660 RTKN2Q8IZC4 609 aa6.64□□□□□ -1.35
NPIPB4-219ENST00000543660 SYNE4Q8N205 404 aa6.64□□□□□ -1.35
NPIPB4-219ENST00000543660 SETDB2Q96T68 719 aa6.64□□□□□ -1.35
NPIPB4-219ENST00000543660 TBC1D2BQ9UPU7 963 aa6.64□□□□□ -1.35
NPIPB4-219ENST00000543660 SCN11AQ9UI33 1791 aa6.64□□□□□ -1.35
NPIPB4-219ENST00000543660 TRPM7Q96QT4 1865 aa6.64□□□□□ -1.35
NPIPB4-219ENST00000543660 RNMTO43148 476 aaKnown RBP6.63□□□□□ -1.35
NPIPB4-219ENST00000543660 CAMTA2O94983 1202 aa6.63□□□□□ -1.35
NPIPB4-219ENST00000543660 CELF2O95319 508 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms