RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 ZNF541Q9H0D2 1346 aa18.32■□□□□ 0.52
VPS37B-204ENST00000543590 SMC1BQ8NDV3 1235 aa18.32■□□□□ 0.52
VPS37B-204ENST00000543590 JARID2Q92833 1246 aaPredicted RBP18.32■□□□□ 0.52
VPS37B-204ENST00000543590 TAF1P21675 1872 aa18.32■□□□□ 0.52
VPS37B-204ENST00000543590 IGKV5-2P06315 115 aa18.31■□□□□ 0.52
VPS37B-204ENST00000543590 HSP90B1P14625 803 aaKnown RBP18.31■□□□□ 0.52
VPS37B-204ENST00000543590 FLIIQ13045 1269 aa18.31■□□□□ 0.52
VPS37B-204ENST00000543590 TMC4Q7Z404 712 aa18.31■□□□□ 0.52
VPS37B-204ENST00000543590 LARGE2Q8N3Y3 721 aa18.31■□□□□ 0.52
VPS37B-204ENST00000543590 L3MBTL3Q96JM7 780 aaPredicted RBP18.31■□□□□ 0.52
VPS37B-204ENST00000543590 ZNF521Q96K83 1311 aa18.31■□□□□ 0.52
VPS37B-204ENST00000543590 COL4A5P29400 1685 aa18.31■□□□□ 0.52
VPS37B-204ENST00000543590 NEXNQ0ZGT2 675 aa18.3■□□□□ 0.52
VPS37B-204ENST00000543590 DPP8Q6V1X1 898 aaPredicted RBP18.3■□□□□ 0.52
VPS37B-204ENST00000543590 MPNDQ8N594 471 aa18.3■□□□□ 0.52
VPS37B-204ENST00000543590 CELF1Q92879 486 aaKnown RBP18.3■□□□□ 0.52
VPS37B-204ENST00000543590 RTFDC1Q9BY42 306 aaPredicted RBP18.3■□□□□ 0.52
VPS37B-204ENST00000543590 APLP1P51693 650 aa18.29■□□□□ 0.52
VPS37B-204ENST00000543590 SUPT20HQ8NEM7 779 aa18.29■□□□□ 0.52
VPS37B-204ENST00000543590 PPIP5K2O43314 1243 aa18.28■□□□□ 0.52
VPS37B-204ENST00000543590 PDE8AO60658 829 aa18.28■□□□□ 0.52
VPS37B-204ENST00000543590 FKBP5Q13451 457 aaPredicted RBP18.28■□□□□ 0.52
VPS37B-204ENST00000543590 AOC3Q16853 763 aa18.28■□□□□ 0.52
VPS37B-204ENST00000543590 CWF19L2Q2TBE0 894 aaKnown RBP18.28■□□□□ 0.52
VPS37B-204ENST00000543590 VPS33BQ9H267 617 aa18.28■□□□□ 0.52
VPS37B-204ENST00000543590 IQCA1LA6NCM1 817 aa18.27■□□□□ 0.52
VPS37B-204ENST00000543590 EIF6P56537 245 aaKnown RBP18.27■□□□□ 0.52
VPS37B-204ENST00000543590 GPC2Q8N158 579 aa18.27■□□□□ 0.52
VPS37B-204ENST00000543590 CACNA1FO60840 1977 aa18.27■□□□□ 0.52
VPS37B-204ENST00000543590 CDHR2Q9BYE9 1310 aa18.27■□□□□ 0.51
VPS37B-204ENST00000543590 COL4A1P02462 1669 aa18.27■□□□□ 0.51
VPS37B-204ENST00000543590 NEURL1BA8MQ27 555 aa18.26■□□□□ 0.51
VPS37B-204ENST00000543590 CCER2I3L3R5 266 aa18.26■□□□□ 0.51
VPS37B-204ENST00000543590 RPS8P62241 208 aaKnown RBP18.26■□□□□ 0.51
VPS37B-204ENST00000543590 NIM1KQ8IY84 436 aa18.26■□□□□ 0.51
VPS37B-204ENST00000543590 CCDC152Q4G0S7 254 aa18.26■□□□□ 0.51
VPS37B-204ENST00000543590 DNAAF4Q8WXU2 420 aa18.26■□□□□ 0.51
VPS37B-204ENST00000543590 TAF1DQ9H5J8 278 aaPredicted RBP18.26■□□□□ 0.51
VPS37B-204ENST00000543590 SEC31BQ9NQW1 1179 aa18.26■□□□□ 0.51
VPS37B-204ENST00000543590 LRRC37AA6NMS7 1700 aa18.25■□□□□ 0.51
VPS37B-204ENST00000543590 SCN4AP35499 1836 aa18.25■□□□□ 0.51
VPS37B-204ENST00000543590 POTEIP0CG38 1075 aa18.25■□□□□ 0.51
VPS37B-204ENST00000543590 POTEJP0CG39 1038 aa18.25■□□□□ 0.51
VPS37B-204ENST00000543590 KIAA2012Q0VF49 1180 aa18.25■□□□□ 0.51
VPS37B-204ENST00000543590 HACL1Q9UJ83 578 aa18.25■□□□□ 0.51
VPS37B-204ENST00000543590 GJA3Q9Y6H8 435 aa18.25■□□□□ 0.51
VPS37B-204ENST00000543590 H7C1W4 665 aa18.24■□□□□ 0.51
VPS37B-204ENST00000543590 LINS1Q8NG48 757 aa18.24■□□□□ 0.51
VPS37B-204ENST00000543590 CCDC85AQ96PX6 553 aaPredicted RBP18.24■□□□□ 0.51
VPS37B-204ENST00000543590 NSFL1CQ9UNZ2 370 aaKnown RBP18.24■□□□□ 0.51
VPS37B-204ENST00000543590 CTSWP56202 376 aa18.23■□□□□ 0.51
VPS37B-204ENST00000543590 GPSM2P81274 684 aa18.23■□□□□ 0.51
VPS37B-204ENST00000543590 GCKRQ14397 625 aa18.23■□□□□ 0.51
VPS37B-204ENST00000543590 CHADLQ6NUI6 762 aa18.23■□□□□ 0.51
VPS37B-204ENST00000543590 UBE3BQ7Z3V4 1068 aa18.23■□□□□ 0.51
VPS37B-204ENST00000543590 ZNRF3Q9ULT6 936 aa18.23■□□□□ 0.51
VPS37B-204ENST00000543590 DUOX1Q9NRD9 1551 aa18.23■□□□□ 0.51
VPS37B-204ENST00000543590 EPHX2P34913 555 aa18.22■□□□□ 0.51
VPS37B-204ENST00000543590 E9PSI1 815 aa18.21■□□□□ 0.51
VPS37B-204ENST00000543590 F6X3S4 739 aa18.21■□□□□ 0.51
VPS37B-204ENST00000543590 HTRA3P83110 453 aa18.21■□□□□ 0.51
VPS37B-204ENST00000543590 TTLL11Q8NHH1 800 aa18.21■□□□□ 0.51
VPS37B-204ENST00000543590 C6orf229H3BNL8 230 aa18.2■□□□□ 0.5
VPS37B-204ENST00000543590 CXCL9Q07325 125 aa18.2■□□□□ 0.5
VPS37B-204ENST00000543590 EAPPQ56P03 285 aaPredicted RBP18.2■□□□□ 0.5
VPS37B-204ENST00000543590 LDHDQ86WU2 507 aa18.2■□□□□ 0.5
VPS37B-204ENST00000543590 DNAJC5GQ8N7S2 189 aa18.2■□□□□ 0.5
VPS37B-204ENST00000543590 POLLQ9UGP5 575 aa18.2■□□□□ 0.5
VPS37B-204ENST00000543590 SCNN1DP51172 638 aa18.2■□□□□ 0.5
VPS37B-204ENST00000543590 CASP7P55210 303 aa18.2■□□□□ 0.5
VPS37B-204ENST00000543590 SLFN5Q08AF3 891 aa18.2■□□□□ 0.5
VPS37B-204ENST00000543590 WASHC4Q2M389 1173 aa18.2■□□□□ 0.5
VPS37B-204ENST00000543590 PNMA8AQ86V59 439 aaPredicted RBP18.2■□□□□ 0.5
VPS37B-204ENST00000543590 ANKRD18AQ8IVF6 992 aa18.2■□□□□ 0.5
VPS37B-204ENST00000543590 LMOD1P29536 600 aaPredicted RBP18.19■□□□□ 0.5
VPS37B-204ENST00000543590 BEND3Q5T5X7 828 aa18.19■□□□□ 0.5
VPS37B-204ENST00000543590 TBC1D16Q8TBP0 767 aa18.19■□□□□ 0.5
VPS37B-204ENST00000543590 CDC5LQ99459 802 aaKnown RBP18.19■□□□□ 0.5
VPS37B-204ENST00000543590 PLA2G12BQ9BX93 195 aa18.19■□□□□ 0.5
VPS37B-204ENST00000543590 GREM2Q9H772 168 aa18.19■□□□□ 0.5
VPS37B-204ENST00000543590 PODXL2Q9NZ53 605 aa18.19■□□□□ 0.5
VPS37B-204ENST00000543590 RTL9Q8NET4 1388 aa18.18■□□□□ 0.5
VPS37B-204ENST00000543590 RIMBP2O15034 1052 aa18.18■□□□□ 0.5
VPS37B-204ENST00000543590 EPS15P42566 896 aa18.18■□□□□ 0.5
VPS37B-204ENST00000543590 CIAPIN1Q6FI81 312 aa18.18■□□□□ 0.5
VPS37B-204ENST00000543590 CDCA7LQ96GN5 454 aa18.18■□□□□ 0.5
VPS37B-204ENST00000543590 ANKIB1Q9P2G1 1089 aa18.18■□□□□ 0.5
VPS37B-204ENST00000543590 CLEC11AQ9Y240 323 aa18.18■□□□□ 0.5
VPS37B-204ENST00000543590 LTBP1Q14766 1721 aa18.18■□□□□ 0.5
VPS37B-204ENST00000543590 MYH3P11055 1940 aa18.17■□□□□ 0.5
VPS37B-204ENST00000543590 YDJCA8MPS7 323 aa18.17■□□□□ 0.5
VPS37B-204ENST00000543590 RAD17O75943 681 aa18.17■□□□□ 0.5
VPS37B-204ENST00000543590 EYA3Q99504 573 aa18.17■□□□□ 0.5
VPS37B-204ENST00000543590 CEP350Q5VT06 3117 aa18.16■□□□□ 0.5
VPS37B-204ENST00000543590 TNIP1Q15025 636 aa18.16■□□□□ 0.5
VPS37B-204ENST00000543590 GPR101Q96P66 508 aaPredicted RBP18.16■□□□□ 0.5
VPS37B-204ENST00000543590 DBNDD1Q9H9R9 158 aa18.16■□□□□ 0.5
VPS37B-204ENST00000543590 UFL1O94874 794 aa18.15■□□□□ 0.5
VPS37B-204ENST00000543590 CSF1RP07333 972 aa18.15■□□□□ 0.5
VPS37B-204ENST00000543590 GMPSP49915 693 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms