RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 POLA2Q14181 598 aa19.99■□□□□ 0.79
TRIM65-204ENST00000543309 ERFEQ4G0M1 354 aa19.99■□□□□ 0.79
TRIM65-204ENST00000543309 EPHA10Q5JZY3 1008 aa19.99■□□□□ 0.79
TRIM65-204ENST00000543309 MSL1Q68DK7 614 aa19.99■□□□□ 0.79
TRIM65-204ENST00000543309 NUTM1Q86Y26 1132 aa19.99■□□□□ 0.79
TRIM65-204ENST00000543309 SYNE4Q8N205 404 aa19.99■□□□□ 0.79
TRIM65-204ENST00000543309 SSH3Q8TE77 659 aa19.99■□□□□ 0.79
TRIM65-204ENST00000543309 CSF1RP07333 972 aa19.98■□□□□ 0.79
TRIM65-204ENST00000543309 MMP10P09238 476 aa19.98■□□□□ 0.79
TRIM65-204ENST00000543309 CTSWP56202 376 aa19.98■□□□□ 0.79
TRIM65-204ENST00000543309 PARP3Q9Y6F1 533 aa19.98■□□□□ 0.79
TRIM65-204ENST00000543309 RTL9Q8NET4 1388 aa19.97■□□□□ 0.79
TRIM65-204ENST00000543309 ABCC12Q96J65 1359 aa19.97■□□□□ 0.79
TRIM65-204ENST00000543309 PNMA6EA0A0J9YXQ4 647 aa19.97■□□□□ 0.79
TRIM65-204ENST00000543309 SRGAP3O43295 1099 aa19.97■□□□□ 0.79
TRIM65-204ENST00000543309 YBX3P16989 372 aaKnown RBP eCLIP19.97■□□□□ 0.792e-8■□□□□ 8.8
TRIM65-204ENST00000543309 ST5P78524 1137 aa19.97■□□□□ 0.79
TRIM65-204ENST00000543309 PRR5LQ6MZQ0 368 aa19.97■□□□□ 0.79
TRIM65-204ENST00000543309 LMBR1LQ6UX01 489 aa19.97■□□□□ 0.79
TRIM65-204ENST00000543309 NPHP1O15259 732 aa19.96■□□□□ 0.79
TRIM65-204ENST00000543309 TTLL11Q8NHH1 800 aa19.96■□□□□ 0.79
TRIM65-204ENST00000543309 KDM2BQ8NHM5 1336 aa19.96■□□□□ 0.79
TRIM65-204ENST00000543309 GRIN3BO60391 1043 aa19.95■□□□□ 0.78
TRIM65-204ENST00000543309 IGHDP01880 384 aa19.95■□□□□ 0.78
TRIM65-204ENST00000543309 HCLS1P14317 486 aaPredicted RBP19.95■□□□□ 0.78
TRIM65-204ENST00000543309 B4GALNT3Q6L9W6 998 aa19.95■□□□□ 0.78
TRIM65-204ENST00000543309 CENPQQ7L2Z9 268 aaPredicted RBP19.95■□□□□ 0.78
TRIM65-204ENST00000543309 TNRC6CQ9HCJ0 1690 aaKnown RBP19.94■□□□□ 0.78
TRIM65-204ENST00000543309 SF3B3Q15393 1217 aaKnown RBP19.94■□□□□ 0.78
TRIM65-204ENST00000543309 CCDC152Q4G0S7 254 aa19.94■□□□□ 0.78
TRIM65-204ENST00000543309 GCC1Q96CN9 775 aa19.93■□□□□ 0.78
TRIM65-204ENST00000543309 NLRP3Q96P20 1036 aa19.93■□□□□ 0.78
TRIM65-204ENST00000543309 DCTPP1Q9H773 170 aa19.93■□□□□ 0.78
TRIM65-204ENST00000543309 CD2APQ9Y5K6 639 aa19.93■□□□□ 0.78
TRIM65-204ENST00000543309 RFX5P48382 616 aaPredicted RBP19.92■□□□□ 0.78
TRIM65-204ENST00000543309 SMC5Q8IY18 1101 aa19.92■□□□□ 0.78
TRIM65-204ENST00000543309 NOP58Q9Y2X3 529 aaKnown RBP19.92■□□□□ 0.78
TRIM65-204ENST00000543309 ANKRD31Q8N7Z5 1873 aa19.92■□□□□ 0.78
TRIM65-204ENST00000543309 KLRG2A4D1S0 409 aaPredicted RBP19.91■□□□□ 0.78
TRIM65-204ENST00000543309 IFIT5Q13325 482 aaKnown RBP19.91■□□□□ 0.78
TRIM65-204ENST00000543309 CCDC57Q2TAC2 916 aa19.91■□□□□ 0.78
TRIM65-204ENST00000543309 BRIP1Q9BX63 1249 aa19.91■□□□□ 0.78
TRIM65-204ENST00000543309 COPRSQ9NQ92 184 aa19.91■□□□□ 0.78
TRIM65-204ENST00000543309 CHMP3Q9Y3E7 222 aa19.91■□□□□ 0.78
TRIM65-204ENST00000543309 FAM161AQ3B820 660 aa19.9■□□□□ 0.78
TRIM65-204ENST00000543309 CRY2Q49AN0 593 aa19.9■□□□□ 0.78
TRIM65-204ENST00000543309 HSP90AB4PQ58FF6 505 aa19.9■□□□□ 0.78
TRIM65-204ENST00000543309 GREM2Q9H772 168 aa19.9■□□□□ 0.78
TRIM65-204ENST00000543309 FBXO3Q9UK99 471 aa19.9■□□□□ 0.78
TRIM65-204ENST00000543309 ANKRD18BA2A2Z9 1011 aa19.89■□□□□ 0.77
TRIM65-204ENST00000543309 ITGA6P23229 1130 aa19.89■□□□□ 0.77
TRIM65-204ENST00000543309 PTPN12Q05209 780 aaKnown RBP19.89■□□□□ 0.77
TRIM65-204ENST00000543309 KIF13BQ9NQT8 1826 aa19.88■□□□□ 0.77
TRIM65-204ENST00000543309 C10orf71Q711Q0 1435 aa19.88■□□□□ 0.77
TRIM65-204ENST00000543309 PDE6BP35913 854 aa19.88■□□□□ 0.77
TRIM65-204ENST00000543309 C3orf67Q6ZVT6 689 aa19.88■□□□□ 0.77
TRIM65-204ENST00000543309 PDZRN3Q9UPQ7 1066 aa19.88■□□□□ 0.77
TRIM65-204ENST00000543309 CEP350Q5VT06 3117 aa19.87■□□□□ 0.77
TRIM65-204ENST00000543309 RAB11FIP3O75154 756 aa19.87■□□□□ 0.77
TRIM65-204ENST00000543309 SURF6O75683 361 aaKnown RBP19.87■□□□□ 0.77
TRIM65-204ENST00000543309 CIAO1O76071 339 aa19.86■□□□□ 0.77
TRIM65-204ENST00000543309 ERC1Q8IUD2 1116 aa19.86■□□□□ 0.77
TRIM65-204ENST00000543309 CCDC24Q8N4L8 307 aa19.86■□□□□ 0.77
TRIM65-204ENST00000543309 CDC5LQ99459 802 aaKnown RBP19.86■□□□□ 0.77
TRIM65-204ENST00000543309 HOXA10P31260 410 aaPredicted RBP19.85■□□□□ 0.77
TRIM65-204ENST00000543309 CCDC85AQ96PX6 553 aaPredicted RBP19.85■□□□□ 0.77
TRIM65-204ENST00000543309 PA2G4Q9UQ80 394 aaKnown RBP19.85■□□□□ 0.77
TRIM65-204ENST00000543309 EXOC6BQ9Y2D4 811 aa19.85■□□□□ 0.77
TRIM65-204ENST00000543309 G3BP1Q13283 466 aaKnown RBP eCLIP19.84■□□□□ 0.77
TRIM65-204ENST00000543309 TAF7LQ5H9L4 462 aa19.84■□□□□ 0.77
TRIM65-204ENST00000543309 DDX46Q7L014 1031 aaKnown RBP19.84■□□□□ 0.77
TRIM65-204ENST00000543309 RPGRQ92834 1020 aaKnown RBP19.84■□□□□ 0.77
TRIM65-204ENST00000543309 COL11A2P13942 1736 aaPredicted RBP19.84■□□□□ 0.77
TRIM65-204ENST00000543309 KIAA1551Q9HCM1 1747 aa19.84■□□□□ 0.77
TRIM65-204ENST00000543309 EYA2O00167 538 aa19.83■□□□□ 0.77
TRIM65-204ENST00000543309 NUCB1Q02818 461 aa19.83■□□□□ 0.77
TRIM65-204ENST00000543309 KLHDC4Q8TBB5 520 aa19.83■□□□□ 0.77
TRIM65-204ENST00000543309 RBM17Q96I25 401 aaKnown RBP19.83■□□□□ 0.77
TRIM65-204ENST00000543309 SEC31BQ9NQW1 1179 aa19.83■□□□□ 0.77
TRIM65-204ENST00000543309 DLEC1Q9Y238 1755 aa19.83■□□□□ 0.76
TRIM65-204ENST00000543309 SRGNP10124 158 aa19.82■□□□□ 0.76
TRIM65-204ENST00000543309 NPR1P16066 1061 aa19.82■□□□□ 0.76
TRIM65-204ENST00000543309 IGHMBP2P38935 993 aaKnown RBP19.82■□□□□ 0.76
TRIM65-204ENST00000543309 IL15P40933 162 aaPredicted RBP19.82■□□□□ 0.76
TRIM65-204ENST00000543309 OS9Q13438 667 aaPredicted RBP19.82■□□□□ 0.76
TRIM65-204ENST00000543309 ANKRD18AQ8IVF6 992 aa19.82■□□□□ 0.76
TRIM65-204ENST00000543309 KIF1BPQ96EK5 621 aa19.82■□□□□ 0.76
TRIM65-204ENST00000543309 ZNF594Q96JF6 807 aaPredicted RBP19.82■□□□□ 0.76
TRIM65-204ENST00000543309 CRAMP1Q96RY5 1269 aa19.82■□□□□ 0.76
TRIM65-204ENST00000543309 LRRCC1Q9C099 1032 aa19.82■□□□□ 0.76
TRIM65-204ENST00000543309 SPEF2Q9C093 1822 aa19.81■□□□□ 0.76
TRIM65-204ENST00000543309 GRAPQ13588 217 aa19.81■□□□□ 0.76
TRIM65-204ENST00000543309 LDHAL6AQ6ZMR3 332 aa19.81■□□□□ 0.76
TRIM65-204ENST00000543309 ATG9AQ7Z3C6 839 aa19.81■□□□□ 0.76
TRIM65-204ENST00000543309 GRAPLQ8TC17 118 aaPredicted RBP19.81■□□□□ 0.76
TRIM65-204ENST00000543309 SIL1Q9H173 461 aa19.81■□□□□ 0.76
TRIM65-204ENST00000543309 RPS8P62241 208 aaKnown RBP19.8■□□□□ 0.76
TRIM65-204ENST00000543309 CHD1LQ86WJ1 897 aa19.8■□□□□ 0.76
TRIM65-204ENST00000543309 RHPN1Q8TCX5 695 aa19.8■□□□□ 0.76
TRIM65-204ENST00000543309 MPHOSPH8Q99549 860 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms