RNA–Protein interactions for RNA: ENST00000542338.1

NPIPB4-216, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 387 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-216ENST00000542338 DCTPP1Q9H773 170 aa11.68□□□□□ -0.54
NPIPB4-216ENST00000542338 CARMIL3Q8ND23 1372 aa11.67□□□□□ -0.54
NPIPB4-216ENST00000542338 UBN2Q6ZU65 1347 aa11.67□□□□□ -0.54
NPIPB4-216ENST00000542338 KDM2BQ8NHM5 1336 aa11.67□□□□□ -0.54
NPIPB4-216ENST00000542338 NPHP1O15259 732 aa11.67□□□□□ -0.54
NPIPB4-216ENST00000542338 TM4SF1P30408 202 aa11.67□□□□□ -0.54
NPIPB4-216ENST00000542338 C1QTNF8P60827 252 aa11.67□□□□□ -0.54
NPIPB4-216ENST00000542338 SLC10A5Q5PT55 438 aa11.67□□□□□ -0.54
NPIPB4-216ENST00000542338 BICDL1Q6ZP65 573 aa11.67□□□□□ -0.54
NPIPB4-216ENST00000542338 AMIGO3Q86WK7 504 aa11.67□□□□□ -0.54
NPIPB4-216ENST00000542338 SMC5Q8IY18 1101 aa11.67□□□□□ -0.54
NPIPB4-216ENST00000542338 BICC1Q9H694 974 aaKnown RBP11.67□□□□□ -0.54
NPIPB4-216ENST00000542338 NUP98P52948 1817 aa11.67□□□□□ -0.54
NPIPB4-216ENST00000542338 RAB11FIP3O75154 756 aa11.66□□□□□ -0.54
NPIPB4-216ENST00000542338 NTSR2O95665 410 aa11.66□□□□□ -0.54
NPIPB4-216ENST00000542338 YBX3P16989 372 aaKnown RBP eCLIP11.66□□□□□ -0.54
NPIPB4-216ENST00000542338 FOXO4P98177 505 aa11.66□□□□□ -0.54
NPIPB4-216ENST00000542338 POLA2Q14181 598 aa11.66□□□□□ -0.54
NPIPB4-216ENST00000542338 NFIXQ14938 502 aa11.66□□□□□ -0.54
NPIPB4-216ENST00000542338 LMBR1LQ6UX01 489 aa11.66□□□□□ -0.54
NPIPB4-216ENST00000542338 SMIM5Q71RC9 77 aa11.66□□□□□ -0.54
NPIPB4-216ENST00000542338 SIRT2Q8IXJ6 389 aa11.66□□□□□ -0.54
NPIPB4-216ENST00000542338 KAZALD1Q96I82 304 aa11.66□□□□□ -0.54
NPIPB4-216ENST00000542338 ANKRD36CQ5JPF3 1778 aa11.66□□□□□ -0.54
NPIPB4-216ENST00000542338 BCORQ6W2J9 1755 aa11.66□□□□□ -0.54
NPIPB4-216ENST00000542338 SCN7AQ01118 1682 aa11.65□□□□□ -0.54
NPIPB4-216ENST00000542338 AFDNP55196 1824 aaKnown RBP11.65□□□□□ -0.54
NPIPB4-216ENST00000542338 CSF1RP07333 972 aa11.65□□□□□ -0.54
NPIPB4-216ENST00000542338 MMP10P09238 476 aa11.65□□□□□ -0.54
NPIPB4-216ENST00000542338 ST5P78524 1137 aa11.65□□□□□ -0.54
NPIPB4-216ENST00000542338 CCDC57Q2TAC2 916 aa11.65□□□□□ -0.54
NPIPB4-216ENST00000542338 RTL5Q5HYW3 569 aaPredicted RBP11.65□□□□□ -0.54
NPIPB4-216ENST00000542338 ERC1Q8IUD2 1116 aa11.65□□□□□ -0.54
NPIPB4-216ENST00000542338 NLRP3Q96P20 1036 aa11.65□□□□□ -0.54
NPIPB4-216ENST00000542338 FBXO3Q9UK99 471 aa11.65□□□□□ -0.54
NPIPB4-216ENST00000542338 NOP58Q9Y2X3 529 aaKnown RBP11.65□□□□□ -0.54
NPIPB4-216ENST00000542338 PARP3Q9Y6F1 533 aa11.65□□□□□ -0.54
NPIPB4-216ENST00000542338 PNMA6EA0A0J9YXQ4 647 aa11.64□□□□□ -0.55
NPIPB4-216ENST00000542338 FAM177BA6PVY3 158 aa11.64□□□□□ -0.55
NPIPB4-216ENST00000542338 SURF6O75683 361 aaKnown RBP11.64□□□□□ -0.55
NPIPB4-216ENST00000542338 SERPINB2P05120 415 aa11.64□□□□□ -0.55
NPIPB4-216ENST00000542338 CTSWP56202 376 aa11.64□□□□□ -0.55
NPIPB4-216ENST00000542338 G3BP1Q13283 466 aaKnown RBP eCLIP11.64□□□□□ -0.55
NPIPB4-216ENST00000542338 IFIT5Q13325 482 aaKnown RBP11.64□□□□□ -0.55
NPIPB4-216ENST00000542338 CCDC152Q4G0S7 254 aa11.64□□□□□ -0.55
NPIPB4-216ENST00000542338 CNBD1Q8NA66 436 aa11.64□□□□□ -0.55
NPIPB4-216ENST00000542338 JARID2Q92833 1246 aaPredicted RBP11.64□□□□□ -0.55
NPIPB4-216ENST00000542338 COPRSQ9NQ92 184 aa11.64□□□□□ -0.55
NPIPB4-216ENST00000542338 CHMP3Q9Y3E7 222 aa11.64□□□□□ -0.55
NPIPB4-216ENST00000542338 KIF13BQ9NQT8 1826 aa11.63□□□□□ -0.55
NPIPB4-216ENST00000542338 C10orf71Q711Q0 1435 aa11.63□□□□□ -0.55
NPIPB4-216ENST00000542338 ANKRD18BA2A2Z9 1011 aa11.63□□□□□ -0.55
NPIPB4-216ENST00000542338 SF3B3Q15393 1217 aaKnown RBP11.63□□□□□ -0.55
NPIPB4-216ENST00000542338 TAF7LQ5H9L4 462 aa11.63□□□□□ -0.55
NPIPB4-216ENST00000542338 EPHA10Q5JZY3 1008 aa11.63□□□□□ -0.55
NPIPB4-216ENST00000542338 TTLL11Q8NHH1 800 aa11.63□□□□□ -0.55
NPIPB4-216ENST00000542338 GOLGB1Q14789 3259 aaKnown RBP11.63□□□□□ -0.55
NPIPB4-216ENST00000542338 TGFB2P61812 414 aa11.62□□□□□ -0.55
NPIPB4-216ENST00000542338 NUCB1Q02818 461 aa11.62□□□□□ -0.55
NPIPB4-216ENST00000542338 OS9Q13438 667 aaPredicted RBP11.62□□□□□ -0.55
NPIPB4-216ENST00000542338 ERFEQ4G0M1 354 aa11.62□□□□□ -0.55
NPIPB4-216ENST00000542338 ANKRD45Q5TZF3 282 aa11.62□□□□□ -0.55
NPIPB4-216ENST00000542338 NUTM1Q86Y26 1132 aa11.62□□□□□ -0.55
NPIPB4-216ENST00000542338 KIF1BPQ96EK5 621 aa11.62□□□□□ -0.55
NPIPB4-216ENST00000542338 LRRCC1Q9C099 1032 aa11.62□□□□□ -0.55
NPIPB4-216ENST00000542338 RTL9Q8NET4 1388 aa11.62□□□□□ -0.55
NPIPB4-216ENST00000542338 RIC1Q4ADV7 1423 aa11.61□□□□□ -0.55
NPIPB4-216ENST00000542338 POLRMTO00411 1230 aaKnown RBP11.61□□□□□ -0.55
NPIPB4-216ENST00000542338 CIAO1O76071 339 aa11.61□□□□□ -0.55
NPIPB4-216ENST00000542338 HCLS1P14317 486 aaPredicted RBP11.61□□□□□ -0.55
NPIPB4-216ENST00000542338 CHD1LQ86WJ1 897 aa11.61□□□□□ -0.55
NPIPB4-216ENST00000542338 CDC5LQ99459 802 aaKnown RBP11.61□□□□□ -0.55
NPIPB4-216ENST00000542338 PDZRN3Q9UPQ7 1066 aa11.61□□□□□ -0.55
NPIPB4-216ENST00000542338 ITGA6P23229 1130 aa11.6□□□□□ -0.55
NPIPB4-216ENST00000542338 IGHMBP2P38935 993 aaKnown RBP11.6□□□□□ -0.55
NPIPB4-216ENST00000542338 IL15P40933 162 aaPredicted RBP11.6□□□□□ -0.55
NPIPB4-216ENST00000542338 RFX5P48382 616 aaPredicted RBP11.6□□□□□ -0.55
NPIPB4-216ENST00000542338 PTPN12Q05209 780 aaKnown RBP11.6□□□□□ -0.55
NPIPB4-216ENST00000542338 PRR5LQ6MZQ0 368 aa11.6□□□□□ -0.55
NPIPB4-216ENST00000542338 SYNE4Q8N205 404 aa11.6□□□□□ -0.55
NPIPB4-216ENST00000542338 BRIP1Q9BX63 1249 aa11.6□□□□□ -0.55
NPIPB4-216ENST00000542338 EXOC6BQ9Y2D4 811 aa11.6□□□□□ -0.55
NPIPB4-216ENST00000542338 EYA2O00167 538 aa11.59□□□□□ -0.55
NPIPB4-216ENST00000542338 PDE6BP35913 854 aa11.59□□□□□ -0.55
NPIPB4-216ENST00000542338 DDR1Q08345 913 aa11.59□□□□□ -0.55
NPIPB4-216ENST00000542338 DDX46Q7L014 1031 aaKnown RBP11.59□□□□□ -0.55
NPIPB4-216ENST00000542338 CLASRPQ8N2M8 674 aaKnown RBP11.59□□□□□ -0.55
NPIPB4-216ENST00000542338 MPHOSPH8Q99549 860 aa11.59□□□□□ -0.55
NPIPB4-216ENST00000542338 WWC3Q9ULE0 1092 aa11.59□□□□□ -0.55
NPIPB4-216ENST00000542338 KIAA1551Q9HCM1 1747 aa11.58□□□□□ -0.56
NPIPB4-216ENST00000542338 FAM161AQ3B820 660 aa11.58□□□□□ -0.56
NPIPB4-216ENST00000542338 LDHAL6AQ6ZMR3 332 aa11.58□□□□□ -0.56
NPIPB4-216ENST00000542338 RHPN1Q8TCX5 695 aa11.58□□□□□ -0.56
NPIPB4-216ENST00000542338 GREM2Q9H772 168 aa11.58□□□□□ -0.56
NPIPB4-216ENST00000542338 GPBP1L1Q9HC44 474 aaPredicted RBP11.58□□□□□ -0.56
NPIPB4-216ENST00000542338 KLRG2A4D1S0 409 aaPredicted RBP11.57□□□□□ -0.56
NPIPB4-216ENST00000542338 ANKRD18AQ8IVF6 992 aa11.57□□□□□ -0.56
NPIPB4-216ENST00000542338 ZNF526Q8TF50 670 aaPredicted RBP11.57□□□□□ -0.56
NPIPB4-216ENST00000542338 RPGRQ92834 1020 aaKnown RBP11.57□□□□□ -0.56
NPIPB4-216ENST00000542338 RBM17Q96I25 401 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms