RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 NEK4P51957 841 aa20.93■□□□□ 0.94
TMEM50B-210ENST00000542230 RASEFQ8IZ41 740 aa20.93■□□□□ 0.94
TMEM50B-210ENST00000542230 UPF3BQ9BZI7 483 aaKnown RBP20.93■□□□□ 0.94
TMEM50B-210ENST00000542230 A0A0D9SFI3 127 aa20.93■□□□□ 0.94
TMEM50B-210ENST00000542230 IL15P40933 162 aaPredicted RBP20.93■□□□□ 0.94
TMEM50B-210ENST00000542230 MEX3CQ5U5Q3 659 aaKnown RBP20.93■□□□□ 0.94
TMEM50B-210ENST00000542230 SUSD4Q5VX71 490 aa20.93■□□□□ 0.94
TMEM50B-210ENST00000542230 DNAJC2Q99543 621 aaKnown RBP20.93■□□□□ 0.94
TMEM50B-210ENST00000542230 FSD1Q9BTV5 496 aa20.93■□□□□ 0.94
TMEM50B-210ENST00000542230 PLA2G12BQ9BX93 195 aa20.93■□□□□ 0.94
TMEM50B-210ENST00000542230 CAMTA2O94983 1202 aa20.92■□□□□ 0.94
TMEM50B-210ENST00000542230 ATP5JP18859 108 aa20.92■□□□□ 0.94
TMEM50B-210ENST00000542230 RAD50Q92878 1312 aa20.92■□□□□ 0.94
TMEM50B-210ENST00000542230 HCLS1P14317 486 aaPredicted RBP20.92■□□□□ 0.94
TMEM50B-210ENST00000542230 SLFNL1Q499Z3 407 aa20.92■□□□□ 0.94
TMEM50B-210ENST00000542230 HSP90AB3PQ58FF7 597 aa20.92■□□□□ 0.94
TMEM50B-210ENST00000542230 AEBP2Q6ZN18 517 aaPredicted RBP20.92■□□□□ 0.94
TMEM50B-210ENST00000542230 HSP90AA1P07900 732 aaKnown RBP20.91■□□□□ 0.94
TMEM50B-210ENST00000542230 HSPA4P34932 840 aa20.91■□□□□ 0.94
TMEM50B-210ENST00000542230 NOL8Q76FK4 1167 aaKnown RBP20.91■□□□□ 0.94
TMEM50B-210ENST00000542230 ITGA6P23229 1130 aa20.9■□□□□ 0.94
TMEM50B-210ENST00000542230 IFIT5Q13325 482 aaKnown RBP20.9■□□□□ 0.94
TMEM50B-210ENST00000542230 DDX46Q7L014 1031 aaKnown RBP20.9■□□□□ 0.94
TMEM50B-210ENST00000542230 A0A1B0GUL7 405 aa20.9■□□□□ 0.94
TMEM50B-210ENST00000542230 ADORA1P30542 326 aa20.9■□□□□ 0.94
TMEM50B-210ENST00000542230 CTSWP56202 376 aa20.9■□□□□ 0.94
TMEM50B-210ENST00000542230 CHMP5Q9NZZ3 219 aa20.9■□□□□ 0.94
TMEM50B-210ENST00000542230 AFF2P51816 1311 aa20.9■□□□□ 0.94
TMEM50B-210ENST00000542230 CDHR2Q9BYE9 1310 aa20.9■□□□□ 0.94
TMEM50B-210ENST00000542230 ZNF589Q86UQ0 364 aaPredicted RBP20.89■□□□□ 0.93
TMEM50B-210ENST00000542230 SMARCC1Q92922 1105 aaPredicted RBP20.89■□□□□ 0.93
TMEM50B-210ENST00000542230 ANKRD36CQ5JPF3 1778 aa20.89■□□□□ 0.93
TMEM50B-210ENST00000542230 CIAO1O76071 339 aa20.88■□□□□ 0.93
TMEM50B-210ENST00000542230 MCCP23508 829 aa20.88■□□□□ 0.93
TMEM50B-210ENST00000542230 TAF7LQ5H9L4 462 aa20.88■□□□□ 0.93
TMEM50B-210ENST00000542230 GJD4Q96KN9 370 aaPredicted RBP20.88■□□□□ 0.93
TMEM50B-210ENST00000542230 SNX14Q9Y5W7 946 aa20.88■□□□□ 0.93
TMEM50B-210ENST00000542230 CPA1P15085 419 aa20.88■□□□□ 0.93
TMEM50B-210ENST00000542230 COL9A3Q14050 684 aaPredicted RBP20.88■□□□□ 0.93
TMEM50B-210ENST00000542230 KIAA1211Q6ZU35 1233 aa20.88■□□□□ 0.93
TMEM50B-210ENST00000542230 ST18O60284 1047 aa20.87■□□□□ 0.93
TMEM50B-210ENST00000542230 SEC62Q99442 399 aaKnown RBP20.87■□□□□ 0.93
TMEM50B-210ENST00000542230 HAUS7Q99871 368 aa20.87■□□□□ 0.93
TMEM50B-210ENST00000542230 CEP126Q9P2H0 1117 aa20.87■□□□□ 0.93
TMEM50B-210ENST00000542230 AMIGO3Q86WK7 504 aa20.87■□□□□ 0.93
TMEM50B-210ENST00000542230 ZGPATQ8N5A5 531 aaKnown RBP20.87■□□□□ 0.93
TMEM50B-210ENST00000542230 ZNF609O15014 1411 aa20.87■□□□□ 0.93
TMEM50B-210ENST00000542230 NIP7Q9Y221 180 aaKnown RBP eCLIP20.86■□□□□ 0.93
TMEM50B-210ENST00000542230 GOLIM4O00461 696 aa20.86■□□□□ 0.93
TMEM50B-210ENST00000542230 ANAPC15P60006 121 aa20.86■□□□□ 0.93
TMEM50B-210ENST00000542230 PRPF40BQ6NWY9 871 aaKnown RBP20.86■□□□□ 0.93
TMEM50B-210ENST00000542230 LDHAL6AQ6ZMR3 332 aa20.86■□□□□ 0.93
TMEM50B-210ENST00000542230 LARP6Q9BRS8 491 aaKnown RBP20.86■□□□□ 0.93
TMEM50B-210ENST00000542230 RIPOR2Q9Y4F9 1068 aa20.86■□□□□ 0.93
TMEM50B-210ENST00000542230 PDE8AO60658 829 aa20.85■□□□□ 0.93
TMEM50B-210ENST00000542230 CCDC129Q6ZRS4 1044 aa20.85■□□□□ 0.93
TMEM50B-210ENST00000542230 RUFY2Q8WXA3 655 aa20.85■□□□□ 0.93
TMEM50B-210ENST00000542230 GPR108Q9NPR9 543 aa20.85■□□□□ 0.93
TMEM50B-210ENST00000542230 TAF6LQ9Y6J9 622 aa20.85■□□□□ 0.93
TMEM50B-210ENST00000542230 SNRKQ9NRH2 765 aa20.85■□□□□ 0.93
TMEM50B-210ENST00000542230 ADCK5Q3MIX3 580 aa20.84■□□□□ 0.93
TMEM50B-210ENST00000542230 SEC31BQ9NQW1 1179 aa20.84■□□□□ 0.93
TMEM50B-210ENST00000542230 CCDC171Q6TFL3 1326 aa20.84■□□□□ 0.93
TMEM50B-210ENST00000542230 RIC1Q4ADV7 1423 aa20.84■□□□□ 0.93
TMEM50B-210ENST00000542230 SCARF1Q14162 830 aa20.83■□□□□ 0.93
TMEM50B-210ENST00000542230 HELBQ8NG08 1087 aaPredicted RBP20.83■□□□□ 0.93
TMEM50B-210ENST00000542230 XAGE2Q96GT9 111 aa20.83■□□□□ 0.93
TMEM50B-210ENST00000542230 RREB1Q92766 1687 aa20.83■□□□□ 0.93
TMEM50B-210ENST00000542230 THSD7AQ9UPZ6 1657 aa20.83■□□□□ 0.93
TMEM50B-210ENST00000542230 ANKRD18BA2A2Z9 1011 aa20.83■□□□□ 0.93
TMEM50B-210ENST00000542230 SNAP23O00161 211 aa20.83■□□□□ 0.93
TMEM50B-210ENST00000542230 PKP1Q13835 747 aa20.83■□□□□ 0.93
TMEM50B-210ENST00000542230 PI16Q6UXB8 463 aa20.83■□□□□ 0.93
TMEM50B-210ENST00000542230 IL17RAQ96F46 866 aa20.83■□□□□ 0.93
TMEM50B-210ENST00000542230 TMX3Q96JJ7 454 aa20.83■□□□□ 0.93
TMEM50B-210ENST00000542230 UTP14AQ9BVJ6 771 aaKnown RBP20.83■□□□□ 0.93
TMEM50B-210ENST00000542230 METTL24Q5JXM2 366 aa20.82■□□□□ 0.92
TMEM50B-210ENST00000542230 COL5A3P25940 1745 aaPredicted RBP20.82■□□□□ 0.92
TMEM50B-210ENST00000542230 SH3TC1Q8TE82 1336 aa20.82■□□□□ 0.92
TMEM50B-210ENST00000542230 NTSR2O95665 410 aa20.82■□□□□ 0.92
TMEM50B-210ENST00000542230 BICDL1Q6ZP65 573 aa20.82■□□□□ 0.92
TMEM50B-210ENST00000542230 CNNM1Q9NRU3 951 aa20.82■□□□□ 0.92
TMEM50B-210ENST00000542230 RBM8AQ9Y5S9 174 aaKnown RBP20.82■□□□□ 0.92
TMEM50B-210ENST00000542230 SEPT12Q8IYM1 358 aa20.81■□□□□ 0.92
TMEM50B-210ENST00000542230 TNPO1Q92973 898 aaKnown RBP20.81■□□□□ 0.92
TMEM50B-210ENST00000542230 PAG1Q9NWQ8 432 aa20.81■□□□□ 0.92
TMEM50B-210ENST00000542230 SRP68Q9UHB9 627 aaKnown RBP20.81■□□□□ 0.92
TMEM50B-210ENST00000542230 MYH3P11055 1940 aa20.81■□□□□ 0.92
TMEM50B-210ENST00000542230 BTAF1O14981 1849 aa20.81■□□□□ 0.92
TMEM50B-210ENST00000542230 NECTIN1Q15223 517 aa20.81■□□□□ 0.92
TMEM50B-210ENST00000542230 MAP4K1Q92918 833 aa20.81■□□□□ 0.92
TMEM50B-210ENST00000542230 MED23Q9ULK4 1368 aa20.81■□□□□ 0.92
TMEM50B-210ENST00000542230 IFIT1P09914 478 aaKnown RBP20.8■□□□□ 0.92
TMEM50B-210ENST00000542230 C3orf67Q6ZVT6 689 aa20.8■□□□□ 0.92
TMEM50B-210ENST00000542230 HIP1O00291 1037 aa20.8■□□□□ 0.92
TMEM50B-210ENST00000542230 EPB41L2O43491 1005 aaKnown RBP20.8■□□□□ 0.92
TMEM50B-210ENST00000542230 DTNBO60941 627 aa20.8■□□□□ 0.92
TMEM50B-210ENST00000542230 SSFA2P28290 1259 aa20.8■□□□□ 0.92
TMEM50B-210ENST00000542230 FKBP4Q02790 459 aaKnown RBP eCLIP20.8■□□□□ 0.92
TMEM50B-210ENST00000542230 VGLL2Q8N8G2 317 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms